RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 NHSL1Q5SYE7 1610 aa29.28■■■□□ 2.28
SMG8-204ENST00000580498 CDC42BPGQ6DT37 1551 aa29.28■■■□□ 2.28
SMG8-204ENST00000580498 CFAP70Q5T0N1 1121 aa29.28■■■□□ 2.28
SMG8-204ENST00000580498 SIRT1Q96EB6 747 aa29.28■■■□□ 2.28
SMG8-204ENST00000580498 SHPRHQ149N8 1683 aa29.27■■■□□ 2.28
SMG8-204ENST00000580498 WAPLQ7Z5K2 1190 aa29.25■■■□□ 2.27
SMG8-204ENST00000580498 POGKQ9P215 609 aa29.22■■■□□ 2.27
SMG8-204ENST00000580498 ESCO1Q5FWF5 840 aa29.21■■■□□ 2.27
SMG8-204ENST00000580498 NPHP3Q7Z494 1330 aa29.19■■■□□ 2.26
SMG8-204ENST00000580498 ORAI2Q96SN7 254 aa29.18■■■□□ 2.26
SMG8-204ENST00000580498 NUTM2BA6NNL0 878 aaPredicted RBP29.16■■■□□ 2.26
SMG8-204ENST00000580498 NUTM2EB1AL46 878 aaPredicted RBP29.16■■■□□ 2.26
SMG8-204ENST00000580498 NUTM2AQ8IVF1 878 aaPredicted RBP29.16■■■□□ 2.26
SMG8-204ENST00000580498 PRAM1Q96QH2 718 aa29.16■■■□□ 2.26
SMG8-204ENST00000580498 DLC1Q96QB1 1528 aa29.15■■■□□ 2.26
SMG8-204ENST00000580498 PLEKHH1Q9ULM0 1364 aa29.15■■■□□ 2.26
SMG8-204ENST00000580498 ZNF772Q68DY9 489 aaPredicted RBP29.13■■■□□ 2.25
SMG8-204ENST00000580498 DDX17Q92841 729 aaKnown RBP29.13■■■□□ 2.25
SMG8-204ENST00000580498 NUTM2FA1L443 756 aa29.12■■■□□ 2.25
SMG8-204ENST00000580498 SAFB2Q14151 953 aaKnown RBP eCLIP29.11■■■□□ 2.25
SMG8-204ENST00000580498 RGS17Q9UGC6 210 aaPredicted RBP29.11■■■□□ 2.25
SMG8-204ENST00000580498 TRAK1Q9UPV9 953 aa29.11■■■□□ 2.25
SMG8-204ENST00000580498 SOS2Q07890 1332 aaPredicted RBP29.11■■■□□ 2.25
SMG8-204ENST00000580498 FMN2Q9NZ56 1722 aa29.11■■■□□ 2.25
SMG8-204ENST00000580498 EIF3AQ14152 1382 aaKnown RBP29.09■■■□□ 2.25
SMG8-204ENST00000580498 PNPLA6Q8IY17 1366 aa29.09■■■□□ 2.25
SMG8-204ENST00000580498 ADGRB1O14514 1584 aa29.09■■■□□ 2.25
SMG8-204ENST00000580498 LRP6O75581 1613 aa29.09■■■□□ 2.25
SMG8-204ENST00000580498 KIF1AQ12756 1690 aa29.08■■■□□ 2.25
SMG8-204ENST00000580498 FOXO3O43524 673 aa29.05■■■□□ 2.24
SMG8-204ENST00000580498 POTEAQ6S8J7 498 aa29.02■■■□□ 2.24
SMG8-204ENST00000580498 KIAA1210Q9ULL0 1709 aa29.02■■■□□ 2.24
SMG8-204ENST00000580498 PSME1Q06323 249 aa29■■■□□ 2.23
SMG8-204ENST00000580498 PHF8Q9UPP1 1060 aa29■■■□□ 2.23
SMG8-204ENST00000580498 ANKARQ7Z5J8 1434 aa29■■■□□ 2.23
SMG8-204ENST00000580498 ADGRB2O60241 1585 aa29■■■□□ 2.23
SMG8-204ENST00000580498 TRIM26Q12899 539 aaPredicted RBP28.99■■■□□ 2.23
SMG8-204ENST00000580498 C8orf37Q96NL8 207 aa28.98■■■□□ 2.23
SMG8-204ENST00000580498 MINK1Q8N4C8 1332 aaPredicted RBP28.97■■■□□ 2.23
SMG8-204ENST00000580498 PXDNQ92626 1479 aa28.97■■■□□ 2.23
SMG8-204ENST00000580498 XPCQ01831 940 aaPredicted RBP28.96■■■□□ 2.23
SMG8-204ENST00000580498 AFF2P51816 1311 aa28.95■■■□□ 2.23
SMG8-204ENST00000580498 ADAMTS2O95450 1211 aa28.95■■■□□ 2.22
SMG8-204ENST00000580498 NGLY1Q96IV0 654 aa28.95■■■□□ 2.22
SMG8-204ENST00000580498 HIRIP3Q9BW71 556 aaPredicted RBP28.95■■■□□ 2.22
SMG8-204ENST00000580498 NEUROD1Q13562 356 aa28.94■■■□□ 2.22
SMG8-204ENST00000580498 KRT28Q7Z3Y7 464 aa28.94■■■□□ 2.22
SMG8-204ENST00000580498 COL22A1Q8NFW1 1626 aaPredicted RBP28.94■■■□□ 2.22
SMG8-204ENST00000580498 RGPD8O14715 1765 aaPredicted RBP28.93■■■□□ 2.22
SMG8-204ENST00000580498 ARHGEF28Q8N1W1 1705 aaKnown RBP28.93■■■□□ 2.22
SMG8-204ENST00000580498 WASLO00401 505 aaPredicted RBP28.92■■■□□ 2.22
SMG8-204ENST00000580498 RXRBP28702 533 aa28.91■■■□□ 2.22
SMG8-204ENST00000580498 HAP1P54257 671 aaPredicted RBP28.9■■■□□ 2.22
SMG8-204ENST00000580498 TULP4Q9NRJ4 1543 aa28.89■■■□□ 2.22
SMG8-204ENST00000580498 L3MBTL2Q969R5 705 aa28.89■■■□□ 2.22
SMG8-204ENST00000580498 GPRASP1Q5JY77 1395 aa28.88■■■□□ 2.21
SMG8-204ENST00000580498 SIN3AQ96ST3 1273 aa28.88■■■□□ 2.21
SMG8-204ENST00000580498 SPATA31A3Q5VYP0 1347 aa28.88■■■□□ 2.21
SMG8-204ENST00000580498 PMFBP1Q8TBY8 1022 aa28.86■■■□□ 2.21
SMG8-204ENST00000580498 TNS3Q68CZ2 1445 aa28.86■■■□□ 2.21
SMG8-204ENST00000580498 LMOD2Q6P5Q4 547 aa28.85■■■□□ 2.21
SMG8-204ENST00000580498 SBNO1A3KN83 1393 aa28.85■■■□□ 2.21
SMG8-204ENST00000580498 ARHGEF10O15013 1369 aa28.85■■■□□ 2.21
SMG8-204ENST00000580498 ITSN1Q15811 1721 aa28.84■■■□□ 2.21
SMG8-204ENST00000580498 NGDNQ8NEJ9 315 aaKnown RBP28.84■■■□□ 2.21
SMG8-204ENST00000580498 QTRT2Q9H974 415 aaKnown RBP28.83■■■□□ 2.21
SMG8-204ENST00000580498 NBPF1Q3BBV0 1214 aa28.82■■■□□ 2.2
SMG8-204ENST00000580498 USP21Q9UK80 565 aa28.82■■■□□ 2.2
SMG8-204ENST00000580498 USP32Q8NFA0 1604 aa28.82■■■□□ 2.2
SMG8-204ENST00000580498 CENPJQ9HC77 1338 aaPredicted RBP28.8■■■□□ 2.2
SMG8-204ENST00000580498 RBM6P78332 1123 aaKnown RBP28.8■■■□□ 2.2
SMG8-204ENST00000580498 TRPC5Q9UL62 973 aaPredicted RBP28.79■■■□□ 2.2
SMG8-204ENST00000580498 CDK12Q9NYV4 1490 aaPredicted RBP28.78■■■□□ 2.2
SMG8-204ENST00000580498 TONSLQ96HA7 1378 aa28.78■■■□□ 2.2
SMG8-204ENST00000580498 MARF1Q9Y4F3 1742 aaKnown RBP28.78■■■□□ 2.2
SMG8-204ENST00000580498 NUDT16Q96DE0 195 aaKnown RBP28.78■■■□□ 2.2
SMG8-204ENST00000580498 CDK19Q9BWU1 502 aa28.78■■■□□ 2.2
SMG8-204ENST00000580498 ROCK2O75116 1388 aaKnown RBP28.77■■■□□ 2.2
SMG8-204ENST00000580498 FNBP4Q8N3X1 1017 aaPredicted RBP28.76■■■□□ 2.19
SMG8-204ENST00000580498 PRR36Q9H6K5 1346 aa28.75■■■□□ 2.19
SMG8-204ENST00000580498 SRPK2P78362 688 aaKnown RBP28.74■■■□□ 2.19
SMG8-204ENST00000580498 TRPM1Q7Z4N2 1603 aa28.73■■■□□ 2.19
SMG8-204ENST00000580498 PAK3O75914 559 aaPredicted RBP28.73■■■□□ 2.19
SMG8-204ENST00000580498 CCDC61Q9Y6R9 512 aa28.73■■■□□ 2.19
SMG8-204ENST00000580498 ATP7BP35670 1465 aa28.72■■■□□ 2.19
SMG8-204ENST00000580498 PLEKHG5O94827 1062 aa28.7■■■□□ 2.18
SMG8-204ENST00000580498 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.18
SMG8-204ENST00000580498 TRPM3Q9HCF6 1732 aaPredicted RBP28.66■■■□□ 2.18
SMG8-204ENST00000580498 EVC2Q86UK5 1308 aa28.66■■■□□ 2.18
SMG8-204ENST00000580498 CABLES1Q8TDN4 633 aa28.65■■■□□ 2.18
SMG8-204ENST00000580498 ATRNO75882 1429 aa28.64■■■□□ 2.18
SMG8-204ENST00000580498 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.18
SMG8-204ENST00000580498 TOPAZ1Q8N9V7 1692 aa28.62■■■□□ 2.17
SMG8-204ENST00000580498 ALS2Q96Q42 1657 aa28.62■■■□□ 2.17
SMG8-204ENST00000580498 PLEKHG3A1L390 1219 aa28.62■■■□□ 2.17
SMG8-204ENST00000580498 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.62■■■□□ 2.17
SMG8-204ENST00000580498 ACEP12821 1306 aa28.62■■■□□ 2.17
SMG8-204ENST00000580498 POLR3AO14802 1390 aaPredicted RBP28.61■■■□□ 2.17
SMG8-204ENST00000580498 ABCA3Q99758 1704 aa28.6■■■□□ 2.17
SMG8-204ENST00000580498 BCL9LQ86UU0 1499 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms