RNA–Protein interactions for RNA: ENST00000580497.1

PMP22-207, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-207ENST00000580497 MYOM1P52179 1685 aa11.7□□□□□ -0.54
PMP22-207ENST00000580497 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
PMP22-207ENST00000580497 ADGRB2O60241 1585 aa11.69□□□□□ -0.54
PMP22-207ENST00000580497 NKTRP30414 1462 aaKnown RBP11.69□□□□□ -0.54
PMP22-207ENST00000580497 KIF7Q2M1P5 1343 aa11.68□□□□□ -0.54
PMP22-207ENST00000580497 WASHC2AQ641Q2 1341 aa11.68□□□□□ -0.54
PMP22-207ENST00000580497 POGKQ9P215 609 aa11.68□□□□□ -0.54
PMP22-207ENST00000580497 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
PMP22-207ENST00000580497 RBM33Q96EV2 1170 aaKnown RBP11.67□□□□□ -0.54
PMP22-207ENST00000580497 USP32Q8NFA0 1604 aa11.67□□□□□ -0.54
PMP22-207ENST00000580497 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
PMP22-207ENST00000580497 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
PMP22-207ENST00000580497 ZNF335Q9H4Z2 1342 aaPredicted RBP11.66□□□□□ -0.54
PMP22-207ENST00000580497 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
PMP22-207ENST00000580497 TMF1P82094 1093 aa11.65□□□□□ -0.54
PMP22-207ENST00000580497 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.55
PMP22-207ENST00000580497 LTBP4Q8N2S1 1624 aa11.64□□□□□ -0.55
PMP22-207ENST00000580497 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
PMP22-207ENST00000580497 CDC42BPGQ6DT37 1551 aa11.63□□□□□ -0.55
PMP22-207ENST00000580497 ITSN1Q15811 1721 aa11.63□□□□□ -0.55
PMP22-207ENST00000580497 ADGRL3Q9HAR2 1447 aa11.62□□□□□ -0.55
PMP22-207ENST00000580497 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
PMP22-207ENST00000580497 POLR3GLQ9BT43 218 aa11.62□□□□□ -0.55
PMP22-207ENST00000580497 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
PMP22-207ENST00000580497 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
PMP22-207ENST00000580497 EVC2Q86UK5 1308 aa11.61□□□□□ -0.55
PMP22-207ENST00000580497 WASLO00401 505 aaPredicted RBP11.61□□□□□ -0.55
PMP22-207ENST00000580497 TMEM94Q12767 1356 aa11.61□□□□□ -0.55
PMP22-207ENST00000580497 AKAP12Q02952 1782 aa11.61□□□□□ -0.55
PMP22-207ENST00000580497 ATP7BP35670 1465 aa11.6□□□□□ -0.55
PMP22-207ENST00000580497 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
PMP22-207ENST00000580497 DDX10Q13206 875 aaKnown RBP11.59□□□□□ -0.55
PMP22-207ENST00000580497 NCOA3Q9Y6Q9 1424 aa11.59□□□□□ -0.55
PMP22-207ENST00000580497 PRR36Q9H6K5 1346 aa11.59□□□□□ -0.55
PMP22-207ENST00000580497 SRPK2P78362 688 aaKnown RBP11.58□□□□□ -0.56
PMP22-207ENST00000580497 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
PMP22-207ENST00000580497 CDCA8Q53HL2 280 aa11.57□□□□□ -0.56
PMP22-207ENST00000580497 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
PMP22-207ENST00000580497 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
PMP22-207ENST00000580497 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
PMP22-207ENST00000580497 C14orf37Q86TY3 774 aa11.56□□□□□ -0.56
PMP22-207ENST00000580497 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
PMP22-207ENST00000580497 ATAD2Q6PL18 1390 aa11.55□□□□□ -0.56
PMP22-207ENST00000580497 PPIP5K1Q6PFW1 1433 aa11.55□□□□□ -0.56
PMP22-207ENST00000580497 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
PMP22-207ENST00000580497 NRKQ7Z2Y5 1582 aa11.54□□□□□ -0.56
PMP22-207ENST00000580497 DCCP43146 1447 aa11.54□□□□□ -0.56
PMP22-207ENST00000580497 MST1RQ04912 1400 aa11.54□□□□□ -0.56
PMP22-207ENST00000580497 TMC1Q8TDI8 760 aa11.54□□□□□ -0.56
PMP22-207ENST00000580497 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
PMP22-207ENST00000580497 ANKARQ7Z5J8 1434 aa11.53□□□□□ -0.56
PMP22-207ENST00000580497 PANK3Q9H999 370 aa11.53□□□□□ -0.56
PMP22-207ENST00000580497 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
PMP22-207ENST00000580497 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
PMP22-207ENST00000580497 MSH6P52701 1360 aa11.53□□□□□ -0.56
PMP22-207ENST00000580497 KIF1AQ12756 1690 aa11.52□□□□□ -0.56
PMP22-207ENST00000580497 C1orf167Q5SNV9 1468 aa11.52□□□□□ -0.56
PMP22-207ENST00000580497 A0A1W2PP64 1363 aa11.52□□□□□ -0.57
PMP22-207ENST00000580497 DIEXFQ68CQ4 756 aaKnown RBP11.51□□□□□ -0.57
PMP22-207ENST00000580497 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
PMP22-207ENST00000580497 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
PMP22-207ENST00000580497 ANKRD26Q9UPS8 1709 aa11.51□□□□□ -0.57
PMP22-207ENST00000580497 ANKRD36BQ8N2N9 1353 aa11.51□□□□□ -0.57
PMP22-207ENST00000580497 NINLQ9Y2I6 1382 aa11.51□□□□□ -0.57
PMP22-207ENST00000580497 PLEKHG3A1L390 1219 aa11.5□□□□□ -0.57
PMP22-207ENST00000580497 PER1O15534 1290 aaPredicted RBP11.5□□□□□ -0.57
PMP22-207ENST00000580497 ATF3P18847 181 aa11.5□□□□□ -0.57
PMP22-207ENST00000580497 CPSF1Q10570 1443 aaKnown RBP11.5□□□□□ -0.57
PMP22-207ENST00000580497 TRPM3Q9HCF6 1732 aaPredicted RBP11.49□□□□□ -0.57
PMP22-207ENST00000580497 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
PMP22-207ENST00000580497 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
PMP22-207ENST00000580497 ORAI2Q96SN7 254 aa11.49□□□□□ -0.57
PMP22-207ENST00000580497 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
PMP22-207ENST00000580497 MARF1Q9Y4F3 1742 aaKnown RBP11.49□□□□□ -0.57
PMP22-207ENST00000580497 ACEP12821 1306 aa11.48□□□□□ -0.57
PMP22-207ENST00000580497 POLR3AO14802 1390 aaPredicted RBP11.48□□□□□ -0.57
PMP22-207ENST00000580497 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
PMP22-207ENST00000580497 ROBO1Q9Y6N7 1651 aa11.48□□□□□ -0.57
PMP22-207ENST00000580497 PHF8Q9UPP1 1060 aa11.47□□□□□ -0.57
PMP22-207ENST00000580497 PIK3C2AO00443 1686 aa11.46□□□□□ -0.57
PMP22-207ENST00000580497 KTN1Q86UP2 1357 aaKnown RBP11.46□□□□□ -0.57
PMP22-207ENST00000580497 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
PMP22-207ENST00000580497 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.57
PMP22-207ENST00000580497 IQSEC2Q5JU85 1478 aa11.45□□□□□ -0.58
PMP22-207ENST00000580497 USP6P35125 1406 aa11.45□□□□□ -0.58
PMP22-207ENST00000580497 SSH2Q76I76 1423 aa11.45□□□□□ -0.58
PMP22-207ENST00000580497 HDGFL2Q7Z4V5 671 aaPredicted RBP11.45□□□□□ -0.58
PMP22-207ENST00000580497 SLAIN2Q9P270 581 aa11.45□□□□□ -0.58
PMP22-207ENST00000580497 USP54Q70EL1 1684 aa11.45□□□□□ -0.58
PMP22-207ENST00000580497 ALS2Q96Q42 1657 aa11.45□□□□□ -0.58
PMP22-207ENST00000580497 EDC4Q6P2E9 1401 aaKnown RBP11.44□□□□□ -0.58
PMP22-207ENST00000580497 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
PMP22-207ENST00000580497 CNGB1Q14028 1251 aaPredicted RBP11.43□□□□□ -0.58
PMP22-207ENST00000580497 BRINP3Q76B58 766 aa11.43□□□□□ -0.58
PMP22-207ENST00000580497 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
PMP22-207ENST00000580497 CERKQ8TCT0 537 aa11.43□□□□□ -0.58
PMP22-207ENST00000580497 DDX17Q92841 729 aaKnown RBP11.43□□□□□ -0.58
PMP22-207ENST00000580497 PXDNQ92626 1479 aa11.43□□□□□ -0.58
PMP22-207ENST00000580497 FOXO3O43524 673 aa11.42□□□□□ -0.58
PMP22-207ENST00000580497 CC2D1BQ5T0F9 858 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms