RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SHPRHQ149N8 1683 aa15.79■□□□□ 0.12
NDEL1-208ENST00000580237 DLC1Q96QB1 1528 aa15.78■□□□□ 0.12
NDEL1-208ENST00000580237 C1orf167Q5SNV9 1468 aa15.78■□□□□ 0.12
NDEL1-208ENST00000580237 ARHGEF28Q8N1W1 1705 aaKnown RBP15.78■□□□□ 0.12
NDEL1-208ENST00000580237 PLEKHH1Q9ULM0 1364 aa15.77■□□□□ 0.12
NDEL1-208ENST00000580237 WAPLQ7Z5K2 1190 aa15.77■□□□□ 0.12
NDEL1-208ENST00000580237 JCADQ9P266 1359 aa15.76■□□□□ 0.11
NDEL1-208ENST00000580237 RGPD8O14715 1765 aaPredicted RBP15.75■□□□□ 0.11
NDEL1-208ENST00000580237 POGKQ9P215 609 aa15.75■□□□□ 0.11
NDEL1-208ENST00000580237 KIF1AQ12756 1690 aa15.75■□□□□ 0.11
NDEL1-208ENST00000580237 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
NDEL1-208ENST00000580237 PRAM1Q96QH2 718 aa15.74■□□□□ 0.11
NDEL1-208ENST00000580237 ADGRB2O60241 1585 aa15.74■□□□□ 0.11
NDEL1-208ENST00000580237 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
NDEL1-208ENST00000580237 TRAK1Q9UPV9 953 aa15.73■□□□□ 0.11
NDEL1-208ENST00000580237 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
NDEL1-208ENST00000580237 SIRT1Q96EB6 747 aa15.71■□□□□ 0.11
NDEL1-208ENST00000580237 SIN3AQ96ST3 1273 aa15.71■□□□□ 0.11
NDEL1-208ENST00000580237 ESCO1Q5FWF5 840 aa15.7■□□□□ 0.1
NDEL1-208ENST00000580237 ORAI2Q96SN7 254 aa15.7■□□□□ 0.1
NDEL1-208ENST00000580237 TRPM1Q7Z4N2 1603 aa15.69■□□□□ 0.1
NDEL1-208ENST00000580237 ITSN1Q15811 1721 aa15.69■□□□□ 0.1
NDEL1-208ENST00000580237 DDX17Q92841 729 aaKnown RBP15.69■□□□□ 0.1
NDEL1-208ENST00000580237 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
NDEL1-208ENST00000580237 MEX3CQ5U5Q3 659 aaKnown RBP15.68■□□□□ 0.1
NDEL1-208ENST00000580237 EIF3AQ14152 1382 aaKnown RBP15.67■□□□□ 0.1
NDEL1-208ENST00000580237 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
NDEL1-208ENST00000580237 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
NDEL1-208ENST00000580237 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
NDEL1-208ENST00000580237 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
NDEL1-208ENST00000580237 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
NDEL1-208ENST00000580237 LRP6O75581 1613 aa15.66■□□□□ 0.1
NDEL1-208ENST00000580237 USP32Q8NFA0 1604 aa15.66■□□□□ 0.1
NDEL1-208ENST00000580237 LRRC59Q96AG4 307 aaKnown RBP15.66■□□□□ 0.1
NDEL1-208ENST00000580237 HIRIP3Q9BW71 556 aaPredicted RBP15.65■□□□□ 0.1
NDEL1-208ENST00000580237 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
NDEL1-208ENST00000580237 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
NDEL1-208ENST00000580237 TULP4Q9NRJ4 1543 aa15.64■□□□□ 0.09
NDEL1-208ENST00000580237 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-208ENST00000580237 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-208ENST00000580237 ILDR2Q71H61 639 aa15.64■□□□□ 0.09
NDEL1-208ENST00000580237 NUTM2AQ8IVF1 878 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-208ENST00000580237 PXDNQ92626 1479 aa15.63■□□□□ 0.09
NDEL1-208ENST00000580237 COL22A1Q8NFW1 1626 aaPredicted RBP15.62■□□□□ 0.09
NDEL1-208ENST00000580237 FOXO3O43524 673 aa15.62■□□□□ 0.09
NDEL1-208ENST00000580237 XPCQ01831 940 aaPredicted RBP15.62■□□□□ 0.09
NDEL1-208ENST00000580237 SOS2Q07890 1332 aaPredicted RBP15.62■□□□□ 0.09
NDEL1-208ENST00000580237 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
NDEL1-208ENST00000580237 NBPF1Q3BBV0 1214 aa15.61■□□□□ 0.09
NDEL1-208ENST00000580237 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
NDEL1-208ENST00000580237 MARF1Q9Y4F3 1742 aaKnown RBP15.6■□□□□ 0.09
NDEL1-208ENST00000580237 PCGF6Q9BYE7 350 aa15.59■□□□□ 0.09
NDEL1-208ENST00000580237 TOPAZ1Q8N9V7 1692 aa15.59■□□□□ 0.09
NDEL1-208ENST00000580237 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
NDEL1-208ENST00000580237 CENPJQ9HC77 1338 aaPredicted RBP15.58■□□□□ 0.08
NDEL1-208ENST00000580237 ATP7BP35670 1465 aa15.58■□□□□ 0.08
NDEL1-208ENST00000580237 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
NDEL1-208ENST00000580237 TNS3Q68CZ2 1445 aa15.56■□□□□ 0.08
NDEL1-208ENST00000580237 ABCA3Q99758 1704 aa15.55■□□□□ 0.08
NDEL1-208ENST00000580237 TRPM3Q9HCF6 1732 aaPredicted RBP15.55■□□□□ 0.08
NDEL1-208ENST00000580237 RALGAPBQ86X10 1494 aa15.55■□□□□ 0.08
NDEL1-208ENST00000580237 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
NDEL1-208ENST00000580237 PRR36Q9H6K5 1346 aa15.54■□□□□ 0.08
NDEL1-208ENST00000580237 ADAMTS2O95450 1211 aa15.54■□□□□ 0.08
NDEL1-208ENST00000580237 PSME1Q06323 249 aa15.54■□□□□ 0.08
NDEL1-208ENST00000580237 KRT28Q7Z3Y7 464 aa15.54■□□□□ 0.08
NDEL1-208ENST00000580237 C8orf37Q96NL8 207 aa15.54■□□□□ 0.08
NDEL1-208ENST00000580237 ZNF772Q68DY9 489 aaPredicted RBP15.53■□□□□ 0.08
NDEL1-208ENST00000580237 LMOD2Q6P5Q4 547 aa15.53■□□□□ 0.08
NDEL1-208ENST00000580237 RGS17Q9UGC6 210 aaPredicted RBP15.53■□□□□ 0.08
NDEL1-208ENST00000580237 SPATA31A3Q5VYP0 1347 aa15.52■□□□□ 0.08
NDEL1-208ENST00000580237 HAP1P54257 671 aaPredicted RBP15.52■□□□□ 0.08
NDEL1-208ENST00000580237 SRPK2P78362 688 aaKnown RBP15.52■□□□□ 0.08
NDEL1-208ENST00000580237 NGDNQ8NEJ9 315 aaKnown RBP15.52■□□□□ 0.08
NDEL1-208ENST00000580237 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
NDEL1-208ENST00000580237 SBNO1A3KN83 1393 aa15.51■□□□□ 0.07
NDEL1-208ENST00000580237 ARHGEF10O15013 1369 aa15.51■□□□□ 0.07
NDEL1-208ENST00000580237 ALS2Q96Q42 1657 aa15.51■□□□□ 0.07
NDEL1-208ENST00000580237 AFF2P51816 1311 aa15.51■□□□□ 0.07
NDEL1-208ENST00000580237 SOCS7O14512 581 aa15.51■□□□□ 0.07
NDEL1-208ENST00000580237 NBPF8Q3BBV2 869 aa15.51■□□□□ 0.07
NDEL1-208ENST00000580237 NUDT16Q96DE0 195 aaKnown RBP15.51■□□□□ 0.07
NDEL1-208ENST00000580237 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
NDEL1-208ENST00000580237 POTEAQ6S8J7 498 aa15.5■□□□□ 0.07
NDEL1-208ENST00000580237 CARD11Q9BXL7 1154 aa15.5■□□□□ 0.07
NDEL1-208ENST00000580237 NGLY1Q96IV0 654 aa15.49■□□□□ 0.07
NDEL1-208ENST00000580237 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
NDEL1-208ENST00000580237 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
NDEL1-208ENST00000580237 EVC2Q86UK5 1308 aa15.47■□□□□ 0.07
NDEL1-208ENST00000580237 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
NDEL1-208ENST00000580237 CCDC61Q9Y6R9 512 aa15.47■□□□□ 0.07
NDEL1-208ENST00000580237 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.07
NDEL1-208ENST00000580237 CABP2Q9NPB3 220 aa15.46■□□□□ 0.07
NDEL1-208ENST00000580237 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.46■□□□□ 0.06
NDEL1-208ENST00000580237 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.06
NDEL1-208ENST00000580237 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
NDEL1-208ENST00000580237 PHRF1Q9P1Y6 1649 aaKnown RBP15.44■□□□□ 0.06
NDEL1-208ENST00000580237 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
NDEL1-208ENST00000580237 NWD2Q9ULI1 1742 aa15.43■□□□□ 0.06
NDEL1-208ENST00000580237 CABLES1Q8TDN4 633 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms