RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 SETBP1Q9Y6X0 1596 aa9.91□□□□□ -0.82
KPNB1-209ENST00000580158 KCNA6P17658 529 aa9.9□□□□□ -0.82
KPNB1-209ENST00000580158 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.82
KPNB1-209ENST00000580158 C3orf67Q6ZVT6 689 aa9.9□□□□□ -0.82
KPNB1-209ENST00000580158 PDCD7Q8N8D1 485 aaKnown RBP9.9□□□□□ -0.82
KPNB1-209ENST00000580158 GPATCH8Q9UKJ3 1502 aaKnown RBP9.9□□□□□ -0.82
KPNB1-209ENST00000580158 EEA1Q15075 1411 aa9.9□□□□□ -0.83
KPNB1-209ENST00000580158 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
KPNB1-209ENST00000580158 LTKP29376 864 aa9.89□□□□□ -0.83
KPNB1-209ENST00000580158 RTEL1-TNFRSF6BF6WH68 1400 aa9.89□□□□□ -0.83
KPNB1-209ENST00000580158 AFF2P51816 1311 aa9.88□□□□□ -0.83
KPNB1-209ENST00000580158 MAP3K1Q13233 1512 aa9.88□□□□□ -0.83
KPNB1-209ENST00000580158 NGLY1Q96IV0 654 aa9.88□□□□□ -0.83
KPNB1-209ENST00000580158 QTRT2Q9H974 415 aaKnown RBP9.88□□□□□ -0.83
KPNB1-209ENST00000580158 SLIT1O75093 1534 aa9.87□□□□□ -0.83
KPNB1-209ENST00000580158 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
KPNB1-209ENST00000580158 UBTFP17480 764 aaKnown RBP9.87□□□□□ -0.83
KPNB1-209ENST00000580158 RGS12O14924 1447 aa9.87□□□□□ -0.83
KPNB1-209ENST00000580158 ABCC3O15438 1527 aa9.87□□□□□ -0.83
KPNB1-209ENST00000580158 PRDM15P57071 1507 aaPredicted RBP9.87□□□□□ -0.83
KPNB1-209ENST00000580158 ARHGAP23Q9P227 1491 aa9.86□□□□□ -0.83
KPNB1-209ENST00000580158 TIAM1Q13009 1591 aa9.86□□□□□ -0.83
KPNB1-209ENST00000580158 TMEM121BQ9BXQ6 578 aaPredicted RBP9.86□□□□□ -0.83
KPNB1-209ENST00000580158 CCNB3Q8WWL7 1395 aa9.86□□□□□ -0.83
KPNB1-209ENST00000580158 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
KPNB1-209ENST00000580158 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
KPNB1-209ENST00000580158 NKTRP30414 1462 aaKnown RBP9.85□□□□□ -0.83
KPNB1-209ENST00000580158 ERVK-7P63135 1459 aa9.85□□□□□ -0.83
KPNB1-209ENST00000580158 KDM5AP29375 1690 aaKnown RBP9.84□□□□□ -0.83
KPNB1-209ENST00000580158 AHDC1Q5TGY3 1603 aaPredicted RBP9.83□□□□□ -0.84
KPNB1-209ENST00000580158 G3V3G9 751 aa9.83□□□□□ -0.84
KPNB1-209ENST00000580158 NCOA2Q15596 1464 aa9.83□□□□□ -0.84
KPNB1-209ENST00000580158 CASKIN1Q8WXD9 1431 aa9.82□□□□□ -0.84
KPNB1-209ENST00000580158 LRP5O75197 1615 aa9.82□□□□□ -0.84
KPNB1-209ENST00000580158 BCANQ96GW7 911 aa9.82□□□□□ -0.84
KPNB1-209ENST00000580158 C8orf37Q96NL8 207 aa9.82□□□□□ -0.84
KPNB1-209ENST00000580158 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
KPNB1-209ENST00000580158 CHD2O14647 1828 aaKnown RBP9.82□□□□□ -0.84
KPNB1-209ENST00000580158 C14orf37Q86TY3 774 aa9.81□□□□□ -0.84
KPNB1-209ENST00000580158 CEP152O94986 1710 aa9.81□□□□□ -0.84
KPNB1-209ENST00000580158 NWD1Q149M9 1564 aa9.8□□□□□ -0.84
KPNB1-209ENST00000580158 TMEM2Q9UHN6 1383 aa9.8□□□□□ -0.84
KPNB1-209ENST00000580158 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
KPNB1-209ENST00000580158 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
KPNB1-209ENST00000580158 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
KPNB1-209ENST00000580158 ATF3P18847 181 aa9.79□□□□□ -0.84
KPNB1-209ENST00000580158 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
KPNB1-209ENST00000580158 DPY19L2Q6NUT2 758 aa9.79□□□□□ -0.84
KPNB1-209ENST00000580158 ZNF644Q9H582 1327 aaPredicted RBP9.79□□□□□ -0.84
KPNB1-209ENST00000580158 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
KPNB1-209ENST00000580158 TET3O43151 1660 aa9.78□□□□□ -0.84
KPNB1-209ENST00000580158 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.78□□□□□ -0.84
KPNB1-209ENST00000580158 DIP2AQ14689 1571 aa9.77□□□□□ -0.85
KPNB1-209ENST00000580158 NCOA3Q9Y6Q9 1424 aa9.77□□□□□ -0.85
KPNB1-209ENST00000580158 TSPY4P0CV99 314 aa9.77□□□□□ -0.85
KPNB1-209ENST00000580158 TSPY10P0CW01 314 aa9.77□□□□□ -0.85
KPNB1-209ENST00000580158 MARVELD3Q96A59 401 aa9.77□□□□□ -0.85
KPNB1-209ENST00000580158 CCDC141Q6ZP82 1450 aa9.77□□□□□ -0.85
KPNB1-209ENST00000580158 YY1P25490 414 aa9.76□□□□□ -0.85
KPNB1-209ENST00000580158 LRRC59Q96AG4 307 aaKnown RBP9.76□□□□□ -0.85
KPNB1-209ENST00000580158 TRPC5Q9UL62 973 aaPredicted RBP9.76□□□□□ -0.85
KPNB1-209ENST00000580158 BOLA1Q9Y3E2 137 aa9.76□□□□□ -0.85
KPNB1-209ENST00000580158 CAMSAP2Q08AD1 1489 aa9.75□□□□□ -0.85
KPNB1-209ENST00000580158 FYCO1Q9BQS8 1478 aa9.75□□□□□ -0.85
KPNB1-209ENST00000580158 SF3B2Q13435 895 aaKnown RBP9.75□□□□□ -0.85
KPNB1-209ENST00000580158 C19orf44Q9H6X5 657 aa9.75□□□□□ -0.85
KPNB1-209ENST00000580158 EFCAB6Q5THR3 1501 aa9.75□□□□□ -0.85
KPNB1-209ENST00000580158 MTUS2Q5JR59 1369 aa9.75□□□□□ -0.85
KPNB1-209ENST00000580158 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
KPNB1-209ENST00000580158 USP21Q9UK80 565 aa9.74□□□□□ -0.85
KPNB1-209ENST00000580158 SETD5Q9C0A6 1442 aa9.73□□□□□ -0.85
KPNB1-209ENST00000580158 MROH1Q8NDA8 1641 aa9.72□□□□□ -0.85
KPNB1-209ENST00000580158 ADAMTS2O95450 1211 aa9.72□□□□□ -0.85
KPNB1-209ENST00000580158 EMP3P54852 163 aa9.72□□□□□ -0.85
KPNB1-209ENST00000580158 BRINP3Q76B58 766 aa9.72□□□□□ -0.85
KPNB1-209ENST00000580158 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.85
KPNB1-209ENST00000580158 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.86
KPNB1-209ENST00000580158 EFCAB3Q8N7B9 438 aa9.71□□□□□ -0.86
KPNB1-209ENST00000580158 BLMP54132 1417 aaPredicted RBP9.71□□□□□ -0.86
KPNB1-209ENST00000580158 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.86
KPNB1-209ENST00000580158 IDI1Q13907 227 aa9.69□□□□□ -0.86
KPNB1-209ENST00000580158 MAST1Q9Y2H9 1570 aa9.69□□□□□ -0.86
KPNB1-209ENST00000580158 EP400Q96L91 3159 aa9.69□□□□□ -0.86
KPNB1-209ENST00000580158 ARHGEF5Q12774 1597 aa9.68□□□□□ -0.86
KPNB1-209ENST00000580158 ASXL1Q8IXJ9 1541 aa9.68□□□□□ -0.86
KPNB1-209ENST00000580158 PNPLA6Q8IY17 1366 aa9.68□□□□□ -0.86
KPNB1-209ENST00000580158 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
KPNB1-209ENST00000580158 PPP1R15AO75807 674 aaPredicted RBP9.68□□□□□ -0.86
KPNB1-209ENST00000580158 HRCP23327 699 aa9.68□□□□□ -0.86
KPNB1-209ENST00000580158 DEFB132Q7Z7B7 95 aa9.68□□□□□ -0.86
KPNB1-209ENST00000580158 PSDA5PKW4 1024 aaPredicted RBP9.67□□□□□ -0.86
KPNB1-209ENST00000580158 FNBP4Q8N3X1 1017 aaPredicted RBP9.67□□□□□ -0.86
KPNB1-209ENST00000580158 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
KPNB1-209ENST00000580158 MYO5BQ9ULV0 1848 aa9.67□□□□□ -0.86
KPNB1-209ENST00000580158 ATRNO75882 1429 aa9.66□□□□□ -0.86
KPNB1-209ENST00000580158 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
KPNB1-209ENST00000580158 SPNS2Q8IVW8 549 aa9.66□□□□□ -0.86
KPNB1-209ENST00000580158 BRWD3Q6RI45 1802 aa9.66□□□□□ -0.86
KPNB1-209ENST00000580158 PLEKHG1Q9ULL1 1385 aa9.65□□□□□ -0.86
KPNB1-209ENST00000580158 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms