RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 ADAMTSL3P82987 1691 aa10.5□□□□□ -0.73
RNF43-204ENST00000580014 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
RNF43-204ENST00000580014 PTPRTO14522 1441 aa10.5□□□□□ -0.73
RNF43-204ENST00000580014 EFCAB6Q5THR3 1501 aa10.5□□□□□ -0.73
RNF43-204ENST00000580014 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
RNF43-204ENST00000580014 TET3O43151 1660 aa10.5□□□□□ -0.73
RNF43-204ENST00000580014 ZMYM3Q14202 1370 aa10.5□□□□□ -0.73
RNF43-204ENST00000580014 ANKRD30BQ9BXX2 1392 aa10.5□□□□□ -0.73
RNF43-204ENST00000580014 NPATQ14207 1427 aa10.5□□□□□ -0.73
RNF43-204ENST00000580014 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
RNF43-204ENST00000580014 MLECQ14165 292 aa10.49□□□□□ -0.73
RNF43-204ENST00000580014 PPP1R15BQ5SWA1 713 aa10.49□□□□□ -0.73
RNF43-204ENST00000580014 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
RNF43-204ENST00000580014 NOS1P29475 1434 aa10.49□□□□□ -0.73
RNF43-204ENST00000580014 PLA2R1Q13018 1463 aa10.49□□□□□ -0.73
RNF43-204ENST00000580014 ATMINO43313 823 aaPredicted RBP10.48□□□□□ -0.73
RNF43-204ENST00000580014 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
RNF43-204ENST00000580014 IER5LQ5T953 404 aa10.47□□□□□ -0.73
RNF43-204ENST00000580014 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
RNF43-204ENST00000580014 MICALL2Q8IY33 904 aa10.47□□□□□ -0.73
RNF43-204ENST00000580014 MROH2AA6NES4 1674 aa10.47□□□□□ -0.73
RNF43-204ENST00000580014 IRX5P78411 483 aaPredicted RBP10.46□□□□□ -0.73
RNF43-204ENST00000580014 CAMSAP1Q5T5Y3 1602 aa10.46□□□□□ -0.74
RNF43-204ENST00000580014 E9PCH4 1651 aa10.45□□□□□ -0.74
RNF43-204ENST00000580014 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
RNF43-204ENST00000580014 SMYD5Q6GMV2 418 aa10.45□□□□□ -0.74
RNF43-204ENST00000580014 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
RNF43-204ENST00000580014 CEP152O94986 1710 aa10.44□□□□□ -0.74
RNF43-204ENST00000580014 ERVK-7P63135 1459 aa10.44□□□□□ -0.74
RNF43-204ENST00000580014 FBXO31Q5XUX0 539 aaPredicted RBP10.44□□□□□ -0.74
RNF43-204ENST00000580014 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
RNF43-204ENST00000580014 CLTCQ00610 1675 aaKnown RBP10.44□□□□□ -0.74
RNF43-204ENST00000580014 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
RNF43-204ENST00000580014 SPATA31D1Q6ZQQ2 1576 aa10.43□□□□□ -0.74
RNF43-204ENST00000580014 SLC52A1Q9NWF4 448 aa10.43□□□□□ -0.74
RNF43-204ENST00000580014 TRPM2O94759 1503 aa10.43□□□□□ -0.74
RNF43-204ENST00000580014 PTPRMP28827 1452 aa10.42□□□□□ -0.74
RNF43-204ENST00000580014 ZC3H15Q8WU90 426 aaKnown RBP10.42□□□□□ -0.74
RNF43-204ENST00000580014 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
RNF43-204ENST00000580014 CEBPAP49715 358 aaPredicted RBP10.41□□□□□ -0.74
RNF43-204ENST00000580014 DSG2Q14126 1118 aa10.41□□□□□ -0.74
RNF43-204ENST00000580014 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
RNF43-204ENST00000580014 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
RNF43-204ENST00000580014 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
RNF43-204ENST00000580014 FER1L4A9Z1Z3 1794 aa10.41□□□□□ -0.74
RNF43-204ENST00000580014 TNRQ92752 1358 aa10.4□□□□□ -0.74
RNF43-204ENST00000580014 SYNMO15061 1565 aa10.4□□□□□ -0.74
RNF43-204ENST00000580014 NEURL4Q96JN8 1562 aa10.39□□□□□ -0.75
RNF43-204ENST00000580014 FOXK1P85037 733 aa10.39□□□□□ -0.75
RNF43-204ENST00000580014 IDI1Q13907 227 aa10.39□□□□□ -0.75
RNF43-204ENST00000580014 TIMELESSQ9UNS1 1208 aa10.39□□□□□ -0.75
RNF43-204ENST00000580014 PIK3C2BO00750 1634 aa10.39□□□□□ -0.75
RNF43-204ENST00000580014 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
RNF43-204ENST00000580014 C3P01024 1663 aa10.38□□□□□ -0.75
RNF43-204ENST00000580014 RIMS1Q86UR5 1692 aaKnown RBP10.38□□□□□ -0.75
RNF43-204ENST00000580014 PREX1Q8TCU6 1659 aa10.38□□□□□ -0.75
RNF43-204ENST00000580014 NLRP1Q9C000 1473 aa10.38□□□□□ -0.75
RNF43-204ENST00000580014 G3V3G9 751 aa10.38□□□□□ -0.75
RNF43-204ENST00000580014 PLCG2P16885 1265 aa10.38□□□□□ -0.75
RNF43-204ENST00000580014 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
RNF43-204ENST00000580014 SPATA31E1Q6ZUB1 1445 aa10.38□□□□□ -0.75
RNF43-204ENST00000580014 SPHKAPQ2M3C7 1700 aa10.37□□□□□ -0.75
RNF43-204ENST00000580014 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
RNF43-204ENST00000580014 GABBR2O75899 941 aa10.36□□□□□ -0.75
RNF43-204ENST00000580014 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
RNF43-204ENST00000580014 SPDYE16A6NNV3 312 aaPredicted RBP10.35□□□□□ -0.75
RNF43-204ENST00000580014 DPYSL4O14531 572 aa10.35□□□□□ -0.75
RNF43-204ENST00000580014 KIF3CO14782 793 aa10.35□□□□□ -0.75
RNF43-204ENST00000580014 UGGT1Q9NYU2 1555 aa10.35□□□□□ -0.75
RNF43-204ENST00000580014 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
RNF43-204ENST00000580014 PDIA6Q15084 440 aa10.34□□□□□ -0.75
RNF43-204ENST00000580014 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
RNF43-204ENST00000580014 STAC3Q96MF2 364 aa10.34□□□□□ -0.75
RNF43-204ENST00000580014 A2ML1A8K2U0 1454 aa10.34□□□□□ -0.75
RNF43-204ENST00000580014 RPGRIP1LQ68CZ1 1315 aa10.33□□□□□ -0.76
RNF43-204ENST00000580014 C2orf72A6NCS6 295 aa10.33□□□□□ -0.76
RNF43-204ENST00000580014 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
RNF43-204ENST00000580014 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
RNF43-204ENST00000580014 KDM5AP29375 1690 aaKnown RBP10.33□□□□□ -0.76
RNF43-204ENST00000580014 ZMYND10O75800 440 aa10.32□□□□□ -0.76
RNF43-204ENST00000580014 L3MBTL2Q969R5 705 aa10.32□□□□□ -0.76
RNF43-204ENST00000580014 TMEM131LA2VDJ0 1609 aa10.32□□□□□ -0.76
RNF43-204ENST00000580014 ZFYVE9O95405 1425 aa10.32□□□□□ -0.76
RNF43-204ENST00000580014 SETD1BQ9UPS6 1966 aaKnown RBP10.32□□□□□ -0.76
RNF43-204ENST00000580014 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
RNF43-204ENST00000580014 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
RNF43-204ENST00000580014 ARHGAP23Q9P227 1491 aa10.3□□□□□ -0.76
RNF43-204ENST00000580014 THEMISQ8N1K5 641 aaPredicted RBP10.3□□□□□ -0.76
RNF43-204ENST00000580014 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
RNF43-204ENST00000580014 MYO3AQ8NEV4 1616 aa10.29□□□□□ -0.76
RNF43-204ENST00000580014 TMEM2Q9UHN6 1383 aa10.29□□□□□ -0.76
RNF43-204ENST00000580014 PPP1R15AO75807 674 aaPredicted RBP10.29□□□□□ -0.76
RNF43-204ENST00000580014 SEC24BO95487 1268 aa10.29□□□□□ -0.76
RNF43-204ENST00000580014 PELP1Q8IZL8 1130 aaKnown RBP10.29□□□□□ -0.76
RNF43-204ENST00000580014 SLC24A3Q9HC58 644 aa10.29□□□□□ -0.76
RNF43-204ENST00000580014 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
RNF43-204ENST00000580014 CEP170BQ9Y4F5 1589 aaPredicted RBP10.29□□□□□ -0.76
RNF43-204ENST00000580014 ZNF142P52746 1687 aaPredicted RBP10.28□□□□□ -0.76
RNF43-204ENST00000580014 SLIT1O75093 1534 aa10.28□□□□□ -0.76
RNF43-204ENST00000580014 ZEB1P37275 1124 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms