RNA–Protein interactions for RNA: ENST00000579565.5

MSL1-206, Transcript of male specific lethal 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-206ENST00000579565 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
MSL1-206ENST00000579565 RALGAPBQ86X10 1494 aa25.39■■□□□ 1.66
MSL1-206ENST00000579565 DCCP43146 1447 aa25.39■■□□□ 1.65
MSL1-206ENST00000579565 PIP4K2BP78356 416 aa25.38■■□□□ 1.65
MSL1-206ENST00000579565 SAFB2Q14151 953 aaKnown RBP eCLIP25.38■■□□□ 1.65
MSL1-206ENST00000579565 ARHGEF28Q8N1W1 1705 aaKnown RBP25.38■■□□□ 1.65
MSL1-206ENST00000579565 CADPS2Q86UW7 1296 aa25.37■■□□□ 1.65
MSL1-206ENST00000579565 CARD11Q9BXL7 1154 aa25.33■■□□□ 1.65
MSL1-206ENST00000579565 GPRASP1Q5JY77 1395 aa25.33■■□□□ 1.65
MSL1-206ENST00000579565 CDC42BPGQ6DT37 1551 aa25.33■■□□□ 1.65
MSL1-206ENST00000579565 EIF3AQ14152 1382 aaKnown RBP25.3■■□□□ 1.64
MSL1-206ENST00000579565 SLAIN2Q9P270 581 aa25.3■■□□□ 1.64
MSL1-206ENST00000579565 MINK1Q8N4C8 1332 aaPredicted RBP25.29■■□□□ 1.64
MSL1-206ENST00000579565 ILDR1Q86SU0 546 aaPredicted RBP25.29■■□□□ 1.64
MSL1-206ENST00000579565 CENPJQ9HC77 1338 aaPredicted RBP25.28■■□□□ 1.64
MSL1-206ENST00000579565 MST1RQ04912 1400 aa25.27■■□□□ 1.64
MSL1-206ENST00000579565 ADGRB2O60241 1585 aa25.26■■□□□ 1.63
MSL1-206ENST00000579565 HIRIP3Q9BW71 556 aaPredicted RBP25.26■■□□□ 1.63
MSL1-206ENST00000579565 ROBO1Q9Y6N7 1651 aa25.25■■□□□ 1.63
MSL1-206ENST00000579565 QRICH2Q9H0J4 1663 aa25.24■■□□□ 1.63
MSL1-206ENST00000579565 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
MSL1-206ENST00000579565 NUTM2FA1L443 756 aa25.21■■□□□ 1.63
MSL1-206ENST00000579565 C1orf167Q5SNV9 1468 aa25.21■■□□□ 1.63
MSL1-206ENST00000579565 WASLO00401 505 aaPredicted RBP25.17■■□□□ 1.62
MSL1-206ENST00000579565 BRINP3Q76B58 766 aa25.17■■□□□ 1.62
MSL1-206ENST00000579565 USP47Q96K76 1375 aa25.15■■□□□ 1.62
MSL1-206ENST00000579565 TULP4Q9NRJ4 1543 aa25.14■■□□□ 1.62
MSL1-206ENST00000579565 ESCO1Q5FWF5 840 aa25.14■■□□□ 1.62
MSL1-206ENST00000579565 ANKARQ7Z5J8 1434 aa25.14■■□□□ 1.61
MSL1-206ENST00000579565 HSPA1LP34931 641 aa25.13■■□□□ 1.61
MSL1-206ENST00000579565 ORAI2Q96SN7 254 aa25.13■■□□□ 1.61
MSL1-206ENST00000579565 CDK19Q9BWU1 502 aa25.12■■□□□ 1.61
MSL1-206ENST00000579565 PHLPP1O60346 1717 aa25.1■■□□□ 1.61
MSL1-206ENST00000579565 SRPK2P78362 688 aaKnown RBP25.1■■□□□ 1.61
MSL1-206ENST00000579565 EVC2Q86UK5 1308 aa25.1■■□□□ 1.61
MSL1-206ENST00000579565 USP32Q8NFA0 1604 aa25.1■■□□□ 1.61
MSL1-206ENST00000579565 AHDC1Q5TGY3 1603 aaPredicted RBP25.09■■□□□ 1.61
MSL1-206ENST00000579565 KIF1AQ12756 1690 aa25.08■■□□□ 1.61
MSL1-206ENST00000579565 SBNO2Q9Y2G9 1366 aa25.08■■□□□ 1.61
MSL1-206ENST00000579565 ST20-MTHFSA0A0A6YYL1 179 aa25.08■■□□□ 1.61
MSL1-206ENST00000579565 RGPD8O14715 1765 aaPredicted RBP25.08■■□□□ 1.61
MSL1-206ENST00000579565 NHSL1Q5SYE7 1610 aa25.07■■□□□ 1.6
MSL1-206ENST00000579565 ATP7BP35670 1465 aa25.07■■□□□ 1.6
MSL1-206ENST00000579565 PRR36Q9H6K5 1346 aa25.06■■□□□ 1.6
MSL1-206ENST00000579565 ITSN1Q15811 1721 aa25.06■■□□□ 1.6
MSL1-206ENST00000579565 NUDT16Q96DE0 195 aaKnown RBP25.05■■□□□ 1.6
MSL1-206ENST00000579565 CABP2Q9NPB3 220 aa25.05■■□□□ 1.6
MSL1-206ENST00000579565 PHF8Q9UPP1 1060 aa25.05■■□□□ 1.6
MSL1-206ENST00000579565 DDX17Q92841 729 aaKnown RBP25.04■■□□□ 1.6
MSL1-206ENST00000579565 COL16A1Q07092 1604 aaPredicted RBP25.02■■□□□ 1.6
MSL1-206ENST00000579565 NPHP3Q7Z494 1330 aa25.02■■□□□ 1.6
MSL1-206ENST00000579565 TOPAZ1Q8N9V7 1692 aa25.01■■□□□ 1.59
MSL1-206ENST00000579565 FOXO3O43524 673 aa25.01■■□□□ 1.59
MSL1-206ENST00000579565 EIF4G2P78344 907 aaKnown RBP eCLIP25.01■■□□□ 1.59
MSL1-206ENST00000579565 PMFBP1Q8TBY8 1022 aa25.01■■□□□ 1.59
MSL1-206ENST00000579565 TESK2Q96S53 571 aa25■■□□□ 1.59
MSL1-206ENST00000579565 SLC24A1O60721 1099 aa24.99■■□□□ 1.59
MSL1-206ENST00000579565 CCDC61Q9Y6R9 512 aa24.99■■□□□ 1.59
MSL1-206ENST00000579565 PPIP5K1Q6PFW1 1433 aa24.98■■□□□ 1.59
MSL1-206ENST00000579565 XPCQ01831 940 aaPredicted RBP24.97■■□□□ 1.59
MSL1-206ENST00000579565 NGDNQ8NEJ9 315 aaKnown RBP24.97■■□□□ 1.59
MSL1-206ENST00000579565 ATAD2Q6PL18 1390 aa24.96■■□□□ 1.59
MSL1-206ENST00000579565 HSPA5P11021 654 aaKnown RBP24.95■■□□□ 1.59
MSL1-206ENST00000579565 TMF1P82094 1093 aa24.95■■□□□ 1.59
MSL1-206ENST00000579565 PXDNQ92626 1479 aa24.95■■□□□ 1.58
MSL1-206ENST00000579565 PSME1Q06323 249 aa24.95■■□□□ 1.58
MSL1-206ENST00000579565 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
MSL1-206ENST00000579565 JCADQ9P266 1359 aa24.93■■□□□ 1.58
MSL1-206ENST00000579565 LRRC59Q96AG4 307 aaKnown RBP24.93■■□□□ 1.58
MSL1-206ENST00000579565 DISP3Q9P2K9 1392 aa24.92■■□□□ 1.58
MSL1-206ENST00000579565 KRT28Q7Z3Y7 464 aa24.92■■□□□ 1.58
MSL1-206ENST00000579565 PLEKHG3A1L390 1219 aa24.9■■□□□ 1.58
MSL1-206ENST00000579565 CABP1Q9NZU7 370 aa24.9■■□□□ 1.58
MSL1-206ENST00000579565 ACEP12821 1306 aa24.89■■□□□ 1.58
MSL1-206ENST00000579565 POLR3AO14802 1390 aaPredicted RBP24.89■■□□□ 1.58
MSL1-206ENST00000579565 CDCA8Q53HL2 280 aa24.88■■□□□ 1.57
MSL1-206ENST00000579565 SHPRHQ149N8 1683 aa24.88■■□□□ 1.57
MSL1-206ENST00000579565 TMC1Q8TDI8 760 aa24.87■■□□□ 1.57
MSL1-206ENST00000579565 PUS7Q96PZ0 661 aaKnown RBP24.87■■□□□ 1.57
MSL1-206ENST00000579565 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
MSL1-206ENST00000579565 TNS3Q68CZ2 1445 aa24.86■■□□□ 1.57
MSL1-206ENST00000579565 PNPLA6Q8IY17 1366 aa24.86■■□□□ 1.57
MSL1-206ENST00000579565 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
MSL1-206ENST00000579565 LMOD2Q6P5Q4 547 aa24.85■■□□□ 1.57
MSL1-206ENST00000579565 PAK3O75914 559 aaPredicted RBP24.84■■□□□ 1.57
MSL1-206ENST00000579565 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
MSL1-206ENST00000579565 SPATA31A3Q5VYP0 1347 aa24.83■■□□□ 1.57
MSL1-206ENST00000579565 POLR3GLQ9BT43 218 aa24.82■■□□□ 1.56
MSL1-206ENST00000579565 NINLQ9Y2I6 1382 aa24.82■■□□□ 1.56
MSL1-206ENST00000579565 SPATA31A6Q5VVP1 1343 aa24.81■■□□□ 1.56
MSL1-206ENST00000579565 ARHGEF10O15013 1369 aa24.8■■□□□ 1.56
MSL1-206ENST00000579565 USP6P35125 1406 aa24.79■■□□□ 1.56
MSL1-206ENST00000579565 NUTM2BA6NNL0 878 aaPredicted RBP24.78■■□□□ 1.56
MSL1-206ENST00000579565 NUTM2EB1AL46 878 aaPredicted RBP24.78■■□□□ 1.56
MSL1-206ENST00000579565 HDGFL2Q7Z4V5 671 aaPredicted RBP24.78■■□□□ 1.56
MSL1-206ENST00000579565 NUTM2AQ8IVF1 878 aaPredicted RBP24.78■■□□□ 1.56
MSL1-206ENST00000579565 SLC12A5Q9H2X9 1139 aa24.78■■□□□ 1.56
MSL1-206ENST00000579565 AKAP12Q02952 1782 aa24.78■■□□□ 1.56
MSL1-206ENST00000579565 COL22A1Q8NFW1 1626 aaPredicted RBP24.78■■□□□ 1.56
MSL1-206ENST00000579565 TERF2IPQ9NYB0 399 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms