RNA–Protein interactions for RNA: ENST00000579365.5

PSMD12-205, Transcript of proteasome 26S subunit, non-ATPase 12, human

TSL 4

Gene PSMD12, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD12-205	ENST00000579365	PRAM1	Q96QH2	718 aa		29.12	■■■□□ 2.25
PSMD12-205	ENST00000579365	TRAK1	Q9UPV9	953 aa		29.12	■■■□□ 2.25
PSMD12-205	ENST00000579365	C1orf167	Q5SNV9	1468 aa		29.11	■■■□□ 2.25
PSMD12-205	ENST00000579365	CDC42BPG	Q6DT37	1551 aa		29.11	■■■□□ 2.25
PSMD12-205	ENST00000579365	NBPF8	Q3BBV2	869 aa		29.06	■■■□□ 2.24
PSMD12-205	ENST00000579365	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.05	■■■□□ 2.24
PSMD12-205	ENST00000579365	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.03	■■■□□ 2.24
PSMD12-205	ENST00000579365	ORAI2	Q96SN7	254 aa		29.03	■■■□□ 2.24
PSMD12-205	ENST00000579365	POGK	Q9P215	609 aa		29.03	■■■□□ 2.24
PSMD12-205	ENST00000579365	COL16A1	Q07092	1604 aa	Predicted RBP	29.01	■■■□□ 2.23
PSMD12-205	ENST00000579365	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29	■■■□□ 2.23
PSMD12-205	ENST00000579365	TRPM1	Q7Z4N2	1603 aa		29	■■■□□ 2.23
PSMD12-205	ENST00000579365	TONSL	Q96HA7	1378 aa		29	■■■□□ 2.23
PSMD12-205	ENST00000579365	PHLPP1	O60346	1717 aa		28.99	■■■□□ 2.23
PSMD12-205	ENST00000579365	CLSPN	Q9HAW4	1339 aa		28.98	■■■□□ 2.23
PSMD12-205	ENST00000579365	FMN2	Q9NZ56	1722 aa		28.98	■■■□□ 2.23
PSMD12-205	ENST00000579365	ADGRB2	O60241	1585 aa		28.98	■■■□□ 2.23
PSMD12-205	ENST00000579365	DDX17	Q92841	729 aa	Known RBP	28.97	■■■□□ 2.23
PSMD12-205	ENST00000579365	NHSL1	Q5SYE7	1610 aa		28.97	■■■□□ 2.23
PSMD12-205	ENST00000579365	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.94	■■■□□ 2.22
PSMD12-205	ENST00000579365	GPRASP1	Q5JY77	1395 aa		28.94	■■■□□ 2.22
PSMD12-205	ENST00000579365	NUTM2F	A1L443	756 aa		28.94	■■■□□ 2.22
PSMD12-205	ENST00000579365	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.93	■■■□□ 2.22
PSMD12-205	ENST00000579365	ESCO1	Q5FWF5	840 aa		28.91	■■■□□ 2.22
PSMD12-205	ENST00000579365	SOS2	Q07890	1332 aa	Predicted RBP	28.9	■■■□□ 2.22
PSMD12-205	ENST00000579365	JCAD	Q9P266	1359 aa		28.89	■■■□□ 2.22
PSMD12-205	ENST00000579365	WASL	O00401	505 aa	Predicted RBP	28.89	■■■□□ 2.22
PSMD12-205	ENST00000579365	ROCK2	O75116	1388 aa	Known RBP	28.88	■■■□□ 2.21
PSMD12-205	ENST00000579365	USP32	Q8NFA0	1604 aa		28.88	■■■□□ 2.21
PSMD12-205	ENST00000579365	PRR36	Q9H6K5	1346 aa		28.88	■■■□□ 2.21
PSMD12-205	ENST00000579365	ANKAR	Q7Z5J8	1434 aa		28.87	■■■□□ 2.21
PSMD12-205	ENST00000579365	MED1	Q15648	1581 aa	Predicted RBP	28.87	■■■□□ 2.21
PSMD12-205	ENST00000579365	RGPD8	O14715	1765 aa	Predicted RBP	28.85	■■■□□ 2.21
PSMD12-205	ENST00000579365	RALGAPB	Q86X10	1494 aa		28.85	■■■□□ 2.21
PSMD12-205	ENST00000579365	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.85	■■■□□ 2.21
PSMD12-205	ENST00000579365	TIMELESS	Q9UNS1	1208 aa		28.84	■■■□□ 2.21
PSMD12-205	ENST00000579365	FOXO3	O43524	673 aa		28.83	■■■□□ 2.21
PSMD12-205	ENST00000579365	LRRC59	Q96AG4	307 aa	Known RBP	28.83	■■■□□ 2.21
PSMD12-205	ENST00000579365	PXDN	Q92626	1479 aa		28.82	■■■□□ 2.2
PSMD12-205	ENST00000579365	TULP4	Q9NRJ4	1543 aa		28.82	■■■□□ 2.2
PSMD12-205	ENST00000579365	NPHP3	Q7Z494	1330 aa		28.81	■■■□□ 2.2
PSMD12-205	ENST00000579365	PHF8	Q9UPP1	1060 aa		28.81	■■■□□ 2.2
PSMD12-205	ENST00000579365	DISP3	Q9P2K9	1392 aa		28.8	■■■□□ 2.2
PSMD12-205	ENST00000579365	CCER1	Q8TC90	406 aa	Predicted RBP	28.8	■■■□□ 2.2
PSMD12-205	ENST00000579365	CDK19	Q9BWU1	502 aa		28.8	■■■□□ 2.2
PSMD12-205	ENST00000579365	SHPRH	Q149N8	1683 aa		28.8	■■■□□ 2.2
PSMD12-205	ENST00000579365	EIF3A	Q14152	1382 aa	Known RBP	28.78	■■■□□ 2.2
PSMD12-205	ENST00000579365	PNPLA6	Q8IY17	1366 aa		28.77	■■■□□ 2.2
PSMD12-205	ENST00000579365	KIF1A	Q12756	1690 aa		28.77	■■■□□ 2.2
PSMD12-205	ENST00000579365	CARD11	Q9BXL7	1154 aa		28.77	■■■□□ 2.2
PSMD12-205	ENST00000579365	ATP7B	P35670	1465 aa		28.77	■■■□□ 2.2
PSMD12-205	ENST00000579365	SPATA31A6	Q5VVP1	1343 aa		28.76	■■■□□ 2.19
PSMD12-205	ENST00000579365	NUDT16	Q96DE0	195 aa	Known RBP	28.76	■■■□□ 2.19
PSMD12-205	ENST00000579365	XPC	Q01831	940 aa	Predicted RBP	28.75	■■■□□ 2.19
PSMD12-205	ENST00000579365	LRP6	O75581	1613 aa		28.74	■■■□□ 2.19
PSMD12-205	ENST00000579365	QRICH2	Q9H0J4	1663 aa		28.74	■■■□□ 2.19
PSMD12-205	ENST00000579365	PMFBP1	Q8TBY8	1022 aa		28.72	■■■□□ 2.19
PSMD12-205	ENST00000579365	KRT28	Q7Z3Y7	464 aa		28.71	■■■□□ 2.19
PSMD12-205	ENST00000579365	RGS17	Q9UGC6	210 aa	Predicted RBP	28.7	■■■□□ 2.18
PSMD12-205	ENST00000579365	SBNO2	Q9Y2G9	1366 aa		28.68	■■■□□ 2.18
PSMD12-205	ENST00000579365	SPATA31A3	Q5VYP0	1347 aa		28.68	■■■□□ 2.18
PSMD12-205	ENST00000579365	CABP2	Q9NPB3	220 aa		28.67	■■■□□ 2.18
PSMD12-205	ENST00000579365	CCDC61	Q9Y6R9	512 aa		28.67	■■■□□ 2.18
PSMD12-205	ENST00000579365	PLEKHG3	A1L390	1219 aa		28.66	■■■□□ 2.18
PSMD12-205	ENST00000579365	TOPAZ1	Q8N9V7	1692 aa		28.65	■■■□□ 2.18
PSMD12-205	ENST00000579365	SBNO1	A3KN83	1393 aa		28.64	■■■□□ 2.18
PSMD12-205	ENST00000579365	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.64	■■■□□ 2.18
PSMD12-205	ENST00000579365	PSME1	Q06323	249 aa		28.63	■■■□□ 2.17
PSMD12-205	ENST00000579365	POLR3A	O14802	1390 aa	Predicted RBP	28.62	■■■□□ 2.17
PSMD12-205	ENST00000579365	SRPK2	P78362	688 aa	Known RBP	28.62	■■■□□ 2.17
PSMD12-205	ENST00000579365	EVC2	Q86UK5	1308 aa		28.62	■■■□□ 2.17
PSMD12-205	ENST00000579365	ITSN1	Q15811	1721 aa		28.61	■■■□□ 2.17
PSMD12-205	ENST00000579365	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.61	■■■□□ 2.17
PSMD12-205	ENST00000579365	NUTM2E	B1AL46	878 aa	Predicted RBP	28.61	■■■□□ 2.17
PSMD12-205	ENST00000579365	ILDR2	Q71H61	639 aa		28.61	■■■□□ 2.17
PSMD12-205	ENST00000579365	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.61	■■■□□ 2.17
PSMD12-205	ENST00000579365	TESK2	Q96S53	571 aa		28.6	■■■□□ 2.17
PSMD12-205	ENST00000579365	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.6	■■■□□ 2.17
PSMD12-205	ENST00000579365	TNS3	Q68CZ2	1445 aa		28.6	■■■□□ 2.17
PSMD12-205	ENST00000579365	NGDN	Q8NEJ9	315 aa	Known RBP	28.59	■■■□□ 2.17
PSMD12-205	ENST00000579365	PHF23	Q9BUL5	403 aa	Predicted RBP	28.58	■■■□□ 2.17
PSMD12-205	ENST00000579365	ACE	P12821	1306 aa		28.58	■■■□□ 2.17
PSMD12-205	ENST00000579365	ST20-MTHFS	A0A0A6YYL1	179 aa		28.57	■■■□□ 2.16
PSMD12-205	ENST00000579365	PPIP5K1	Q6PFW1	1433 aa		28.56	■■■□□ 2.16
PSMD12-205	ENST00000579365	CABP1	Q9NZU7	370 aa		28.54	■■■□□ 2.16
PSMD12-205	ENST00000579365	USP47	Q96K76	1375 aa		28.52	■■■□□ 2.16
PSMD12-205	ENST00000579365	ALS2	Q96Q42	1657 aa		28.52	■■■□□ 2.16
PSMD12-205	ENST00000579365	POTEA	Q6S8J7	498 aa		28.51	■■■□□ 2.15
PSMD12-205	ENST00000579365	ARHGEF10	O15013	1369 aa		28.5	■■■□□ 2.15
PSMD12-205	ENST00000579365	MEX3C	Q5U5Q3	659 aa	Known RBP	28.5	■■■□□ 2.15
PSMD12-205	ENST00000579365	ADAMTS2	O95450	1211 aa		28.49	■■■□□ 2.15
PSMD12-205	ENST00000579365	PUS7	Q96PZ0	661 aa	Known RBP	28.48	■■■□□ 2.15
PSMD12-205	ENST00000579365	ATAD2	Q6PL18	1390 aa		28.48	■■■□□ 2.15
PSMD12-205	ENST00000579365	CABLES1	Q8TDN4	633 aa		28.47	■■■□□ 2.15
PSMD12-205	ENST00000579365	SSH2	Q76I76	1423 aa		28.45	■■■□□ 2.15
PSMD12-205	ENST00000579365	AFF2	P51816	1311 aa		28.44	■■■□□ 2.14
PSMD12-205	ENST00000579365	LMOD2	Q6P5Q4	547 aa		28.44	■■■□□ 2.14
PSMD12-205	ENST00000579365	C8orf37	Q96NL8	207 aa		28.44	■■■□□ 2.14
PSMD12-205	ENST00000579365	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.43	■■■□□ 2.14
PSMD12-205	ENST00000579365	USP6	P35125	1406 aa		28.43	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms