RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 ADAMTS2O95450 1211 aa15.96■□□□□ 0.15
CSNK1D-210ENST00000579308 RGL3Q3MIN7 710 aa15.96■□□□□ 0.15
CSNK1D-210ENST00000579308 NGLY1Q96IV0 654 aa15.96■□□□□ 0.15
CSNK1D-210ENST00000579308 WAPLQ7Z5K2 1190 aa15.95■□□□□ 0.14
CSNK1D-210ENST00000579308 FNBP4Q8N3X1 1017 aaPredicted RBP15.95■□□□□ 0.14
CSNK1D-210ENST00000579308 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
CSNK1D-210ENST00000579308 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
CSNK1D-210ENST00000579308 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
CSNK1D-210ENST00000579308 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
CSNK1D-210ENST00000579308 LRPPRCP42704 1394 aaKnown RBP15.93■□□□□ 0.14
CSNK1D-210ENST00000579308 STK26Q9P289 416 aa15.93■□□□□ 0.14
CSNK1D-210ENST00000579308 RGS12O14924 1447 aa15.93■□□□□ 0.14
CSNK1D-210ENST00000579308 TECPR2O15040 1411 aa15.93■□□□□ 0.14
CSNK1D-210ENST00000579308 TMEM132EQ6IEE7 984 aa15.92■□□□□ 0.14
CSNK1D-210ENST00000579308 PPLO60437 1756 aa15.92■□□□□ 0.14
CSNK1D-210ENST00000579308 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
CSNK1D-210ENST00000579308 FOXO3O43524 673 aa15.91■□□□□ 0.14
CSNK1D-210ENST00000579308 USP21Q9UK80 565 aa15.91■□□□□ 0.14
CSNK1D-210ENST00000579308 SIRT1Q96EB6 747 aa15.9■□□□□ 0.14
CSNK1D-210ENST00000579308 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-210ENST00000579308 PLEKHH1Q9ULM0 1364 aa15.89■□□□□ 0.13
CSNK1D-210ENST00000579308 C14orf93Q9H972 538 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-210ENST00000579308 MYOM2P54296 1465 aa15.89■□□□□ 0.13
CSNK1D-210ENST00000579308 PXDNQ92626 1479 aa15.89■□□□□ 0.13
CSNK1D-210ENST00000579308 CDC42BPGQ6DT37 1551 aa15.88■□□□□ 0.13
CSNK1D-210ENST00000579308 PIK3C2GO75747 1445 aa15.88■□□□□ 0.13
CSNK1D-210ENST00000579308 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-210ENST00000579308 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
CSNK1D-210ENST00000579308 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-210ENST00000579308 ATRNO75882 1429 aa15.86■□□□□ 0.13
CSNK1D-210ENST00000579308 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-210ENST00000579308 BCL9LQ86UU0 1499 aa15.85■□□□□ 0.13
CSNK1D-210ENST00000579308 COL22A1Q8NFW1 1626 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-210ENST00000579308 SRCAPQ6ZRS2 3230 aa15.84■□□□□ 0.13
CSNK1D-210ENST00000579308 ADRA2BP18089 450 aa15.83■□□□□ 0.12
CSNK1D-210ENST00000579308 CFAP70Q5T0N1 1121 aa15.83■□□□□ 0.12
CSNK1D-210ENST00000579308 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.12
CSNK1D-210ENST00000579308 NRXN1Q9ULB1 1477 aa15.83■□□□□ 0.12
CSNK1D-210ENST00000579308 ATAD2Q6PL18 1390 aa15.81■□□□□ 0.12
CSNK1D-210ENST00000579308 KRT28Q7Z3Y7 464 aa15.81■□□□□ 0.12
CSNK1D-210ENST00000579308 GJD4Q96KN9 370 aaPredicted RBP15.81■□□□□ 0.12
CSNK1D-210ENST00000579308 DHX57Q6P158 1386 aaKnown RBP15.8■□□□□ 0.12
CSNK1D-210ENST00000579308 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
CSNK1D-210ENST00000579308 UNC5CLQ8IV45 518 aa15.78■□□□□ 0.12
CSNK1D-210ENST00000579308 PRAM1Q96QH2 718 aa15.78■□□□□ 0.12
CSNK1D-210ENST00000579308 PHF8Q9UPP1 1060 aa15.78■□□□□ 0.12
CSNK1D-210ENST00000579308 EP400Q96L91 3159 aa15.77■□□□□ 0.11
CSNK1D-210ENST00000579308 KNDC1Q76NI1 1749 aa15.77■□□□□ 0.11
CSNK1D-210ENST00000579308 PSME1Q06323 249 aa15.76■□□□□ 0.11
CSNK1D-210ENST00000579308 SLIT2O94813 1529 aa15.76■□□□□ 0.11
CSNK1D-210ENST00000579308 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
CSNK1D-210ENST00000579308 SAFB2Q14151 953 aaKnown RBP eCLIP15.75■□□□□ 0.111e-12■■■■■ 37.9
CSNK1D-210ENST00000579308 CCDC125Q86Z20 511 aa15.75■□□□□ 0.11
CSNK1D-210ENST00000579308 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
CSNK1D-210ENST00000579308 FMN2Q9NZ56 1722 aa15.74■□□□□ 0.11
CSNK1D-210ENST00000579308 CABLES1Q8TDN4 633 aa15.74■□□□□ 0.11
CSNK1D-210ENST00000579308 POGKQ9P215 609 aa15.73■□□□□ 0.11
CSNK1D-210ENST00000579308 RALGAPBQ86X10 1494 aa15.72■□□□□ 0.11
CSNK1D-210ENST00000579308 TNS3Q68CZ2 1445 aa15.72■□□□□ 0.11
CSNK1D-210ENST00000579308 ONECUT3O60422 494 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-210ENST00000579308 KIF1AQ12756 1690 aa15.71■□□□□ 0.11
CSNK1D-210ENST00000579308 VPS72Q15906 364 aa15.71■□□□□ 0.11
CSNK1D-210ENST00000579308 DLC1Q96QB1 1528 aa15.71■□□□□ 0.11
CSNK1D-210ENST00000579308 ANKARQ7Z5J8 1434 aa15.7■□□□□ 0.1
CSNK1D-210ENST00000579308 FAM83GA6ND36 823 aa15.7■□□□□ 0.1
CSNK1D-210ENST00000579308 HRCP23327 699 aa15.7■□□□□ 0.1
CSNK1D-210ENST00000579308 PMFBP1Q8TBY8 1022 aa15.7■□□□□ 0.1
CSNK1D-210ENST00000579308 TRAK1Q9UPV9 953 aa15.7■□□□□ 0.1
CSNK1D-210ENST00000579308 ADGRB1O14514 1584 aa15.7■□□□□ 0.1
CSNK1D-210ENST00000579308 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
CSNK1D-210ENST00000579308 ARHGEF10O15013 1369 aa15.69■□□□□ 0.1
CSNK1D-210ENST00000579308 GLI3P10071 1580 aa15.68■□□□□ 0.1
CSNK1D-210ENST00000579308 SEPT12Q8IYM1 358 aa15.68■□□□□ 0.1
CSNK1D-210ENST00000579308 DCAF11Q8TEB1 546 aa15.68■□□□□ 0.1
CSNK1D-210ENST00000579308 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-210ENST00000579308 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
CSNK1D-210ENST00000579308 KDM2AQ9Y2K7 1162 aa15.68■□□□□ 0.1
CSNK1D-210ENST00000579308 PRR36Q9H6K5 1346 aa15.68■□□□□ 0.1
CSNK1D-210ENST00000579308 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-210ENST00000579308 LMOD2Q6P5Q4 547 aa15.67■□□□□ 0.1
CSNK1D-210ENST00000579308 MARF1Q9Y4F3 1742 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-210ENST00000579308 USP32Q8NFA0 1604 aa15.66■□□□□ 0.1
CSNK1D-210ENST00000579308 WASLO00401 505 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-210ENST00000579308 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-210ENST00000579308 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.65■□□□□ 0.1
CSNK1D-210ENST00000579308 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
CSNK1D-210ENST00000579308 ADGRB2O60241 1585 aa15.64■□□□□ 0.09
CSNK1D-210ENST00000579308 BLMP54132 1417 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-210ENST00000579308 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
CSNK1D-210ENST00000579308 GPRASP1Q5JY77 1395 aa15.62■□□□□ 0.09
CSNK1D-210ENST00000579308 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-210ENST00000579308 KRT27Q7Z3Y8 459 aa15.62■□□□□ 0.09
CSNK1D-210ENST00000579308 DEFB132Q7Z7B7 95 aa15.61■□□□□ 0.09
CSNK1D-210ENST00000579308 BTG4Q9NY30 223 aa15.61■□□□□ 0.09
CSNK1D-210ENST00000579308 CCDC9Q9Y3X0 531 aaKnown RBP15.61■□□□□ 0.09
CSNK1D-210ENST00000579308 TULP4Q9NRJ4 1543 aa15.6■□□□□ 0.09
CSNK1D-210ENST00000579308 NGDNQ8NEJ9 315 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-210ENST00000579308 NUDT16Q96DE0 195 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-210ENST00000579308 FAM98CQ17RN3 349 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-210ENST00000579308 SPATA31A5Q5VU36 1347 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms