RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 ADGRF5Q8IZF2 1346 aa13.92□□□□□ -0.18
LINC00271-204ENST00000579057 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC00271-204ENST00000579057 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
LINC00271-204ENST00000579057 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
LINC00271-204ENST00000579057 RXRBP28702 533 aa13.9□□□□□ -0.18
LINC00271-204ENST00000579057 TECPR2O15040 1411 aa13.9□□□□□ -0.19
LINC00271-204ENST00000579057 SRCAPQ6ZRS2 3230 aa13.89□□□□□ -0.19
LINC00271-204ENST00000579057 KNDC1Q76NI1 1749 aa13.89□□□□□ -0.19
LINC00271-204ENST00000579057 EP400Q96L91 3159 aa13.89□□□□□ -0.19
LINC00271-204ENST00000579057 CCDC144AA2RUR9 1427 aa13.89□□□□□ -0.19
LINC00271-204ENST00000579057 RGS12O14924 1447 aa13.89□□□□□ -0.19
LINC00271-204ENST00000579057 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
LINC00271-204ENST00000579057 PXDNQ92626 1479 aa13.87□□□□□ -0.19
LINC00271-204ENST00000579057 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
LINC00271-204ENST00000579057 PIK3C2GO75747 1445 aa13.87□□□□□ -0.19
LINC00271-204ENST00000579057 LRPPRCP42704 1394 aaKnown RBP13.86□□□□□ -0.19
LINC00271-204ENST00000579057 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
LINC00271-204ENST00000579057 MYOM2P54296 1465 aa13.86□□□□□ -0.19
LINC00271-204ENST00000579057 ABCC11Q96J66 1382 aa13.85□□□□□ -0.19
LINC00271-204ENST00000579057 ANKRD30BQ9BXX2 1392 aa13.85□□□□□ -0.19
LINC00271-204ENST00000579057 PLEKHH1Q9ULM0 1364 aa13.85□□□□□ -0.19
LINC00271-204ENST00000579057 FMN2Q9NZ56 1722 aa13.85□□□□□ -0.19
LINC00271-204ENST00000579057 ADAMTS2O95450 1211 aa13.85□□□□□ -0.19
LINC00271-204ENST00000579057 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
LINC00271-204ENST00000579057 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
LINC00271-204ENST00000579057 QTRT2Q9H974 415 aaKnown RBP13.85□□□□□ -0.19
LINC00271-204ENST00000579057 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
LINC00271-204ENST00000579057 RBM6P78332 1123 aaKnown RBP13.84□□□□□ -0.19
LINC00271-204ENST00000579057 NRXN1Q9ULB1 1477 aa13.83□□□□□ -0.2
LINC00271-204ENST00000579057 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
LINC00271-204ENST00000579057 STK26Q9P289 416 aa13.83□□□□□ -0.2
LINC00271-204ENST00000579057 YTHDC2Q9H6S0 1430 aaKnown RBP13.82□□□□□ -0.2
LINC00271-204ENST00000579057 RGPD8O14715 1765 aaPredicted RBP13.82□□□□□ -0.2
LINC00271-204ENST00000579057 ESCO1Q5FWF5 840 aa13.82□□□□□ -0.2
LINC00271-204ENST00000579057 FNBP4Q8N3X1 1017 aaPredicted RBP13.82□□□□□ -0.2
LINC00271-204ENST00000579057 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
LINC00271-204ENST00000579057 ATRNO75882 1429 aa13.81□□□□□ -0.2
LINC00271-204ENST00000579057 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
LINC00271-204ENST00000579057 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
LINC00271-204ENST00000579057 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
LINC00271-204ENST00000579057 FOXO3O43524 673 aa13.8□□□□□ -0.2
LINC00271-204ENST00000579057 XPCQ01831 940 aaPredicted RBP13.8□□□□□ -0.2
LINC00271-204ENST00000579057 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
LINC00271-204ENST00000579057 USP21Q9UK80 565 aa13.79□□□□□ -0.2
LINC00271-204ENST00000579057 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
LINC00271-204ENST00000579057 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
LINC00271-204ENST00000579057 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
LINC00271-204ENST00000579057 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
LINC00271-204ENST00000579057 CFAP70Q5T0N1 1121 aa13.76□□□□□ -0.21
LINC00271-204ENST00000579057 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
LINC00271-204ENST00000579057 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
LINC00271-204ENST00000579057 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
LINC00271-204ENST00000579057 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
LINC00271-204ENST00000579057 SLIT2O94813 1529 aa13.74□□□□□ -0.21
LINC00271-204ENST00000579057 RAB3GAP2Q9H2M9 1393 aa13.74□□□□□ -0.21
LINC00271-204ENST00000579057 DLC1Q96QB1 1528 aa13.74□□□□□ -0.21
LINC00271-204ENST00000579057 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
LINC00271-204ENST00000579057 GLI3P10071 1580 aa13.73□□□□□ -0.21
LINC00271-204ENST00000579057 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
LINC00271-204ENST00000579057 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
LINC00271-204ENST00000579057 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
LINC00271-204ENST00000579057 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
LINC00271-204ENST00000579057 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
LINC00271-204ENST00000579057 PRAM1Q96QH2 718 aa13.71□□□□□ -0.21
LINC00271-204ENST00000579057 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.22
LINC00271-204ENST00000579057 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
LINC00271-204ENST00000579057 BRWD3Q6RI45 1802 aa13.7□□□□□ -0.22
LINC00271-204ENST00000579057 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
LINC00271-204ENST00000579057 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
LINC00271-204ENST00000579057 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
LINC00271-204ENST00000579057 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC00271-204ENST00000579057 GJD4Q96KN9 370 aaPredicted RBP13.69□□□□□ -0.22
LINC00271-204ENST00000579057 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
LINC00271-204ENST00000579057 ANKARQ7Z5J8 1434 aa13.68□□□□□ -0.22
LINC00271-204ENST00000579057 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
LINC00271-204ENST00000579057 SBNO1A3KN83 1393 aa13.68□□□□□ -0.22
LINC00271-204ENST00000579057 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
LINC00271-204ENST00000579057 ALS2Q96Q42 1657 aa13.67□□□□□ -0.22
LINC00271-204ENST00000579057 CABLES1Q8TDN4 633 aa13.67□□□□□ -0.22
LINC00271-204ENST00000579057 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
LINC00271-204ENST00000579057 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
LINC00271-204ENST00000579057 CRYBG1Q9Y4K1 1723 aa13.65□□□□□ -0.22
LINC00271-204ENST00000579057 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
LINC00271-204ENST00000579057 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
LINC00271-204ENST00000579057 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
LINC00271-204ENST00000579057 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
LINC00271-204ENST00000579057 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
LINC00271-204ENST00000579057 ARHGEF10O15013 1369 aa13.63□□□□□ -0.23
LINC00271-204ENST00000579057 PSME1Q06323 249 aa13.63□□□□□ -0.23
LINC00271-204ENST00000579057 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
LINC00271-204ENST00000579057 POGKQ9P215 609 aa13.63□□□□□ -0.23
LINC00271-204ENST00000579057 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
LINC00271-204ENST00000579057 VPS72Q15906 364 aa13.62□□□□□ -0.23
LINC00271-204ENST00000579057 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
LINC00271-204ENST00000579057 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
LINC00271-204ENST00000579057 ONECUT3O60422 494 aaPredicted RBP13.61□□□□□ -0.23
LINC00271-204ENST00000579057 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
LINC00271-204ENST00000579057 KDM2AQ9Y2K7 1162 aa13.61□□□□□ -0.23
LINC00271-204ENST00000579057 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
LINC00271-204ENST00000579057 CCDC125Q86Z20 511 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms