RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 STK26Q9P289 416 aa17■□□□□ 0.31
SSH2-208ENST00000579040 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
SSH2-208ENST00000579040 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
SSH2-208ENST00000579040 ZNF772Q68DY9 489 aaPredicted RBP16.99■□□□□ 0.31
SSH2-208ENST00000579040 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
SSH2-208ENST00000579040 SOS2Q07890 1332 aaPredicted RBP16.98■□□□□ 0.31
SSH2-208ENST00000579040 DDX17Q92841 729 aaKnown RBP16.98■□□□□ 0.31
SSH2-208ENST00000579040 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
SSH2-208ENST00000579040 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
SSH2-208ENST00000579040 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
SSH2-208ENST00000579040 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
SSH2-208ENST00000579040 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
SSH2-208ENST00000579040 WAPLQ7Z5K2 1190 aa16.96■□□□□ 0.31
SSH2-208ENST00000579040 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
SSH2-208ENST00000579040 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.3
SSH2-208ENST00000579040 KIF1AQ12756 1690 aa16.95■□□□□ 0.3
SSH2-208ENST00000579040 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
SSH2-208ENST00000579040 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
SSH2-208ENST00000579040 NPHP3Q7Z494 1330 aa16.95■□□□□ 0.3
SSH2-208ENST00000579040 CFAP70Q5T0N1 1121 aa16.94■□□□□ 0.3
SSH2-208ENST00000579040 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
SSH2-208ENST00000579040 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
SSH2-208ENST00000579040 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
SSH2-208ENST00000579040 PXDNQ92626 1479 aa16.93■□□□□ 0.3
SSH2-208ENST00000579040 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
SSH2-208ENST00000579040 AFF2P51816 1311 aa16.91■□□□□ 0.3
SSH2-208ENST00000579040 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
SSH2-208ENST00000579040 CDK12Q9NYV4 1490 aaPredicted RBP16.9■□□□□ 0.3
SSH2-208ENST00000579040 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
SSH2-208ENST00000579040 DCAF11Q8TEB1 546 aa16.88■□□□□ 0.29
SSH2-208ENST00000579040 C8orf37Q96NL8 207 aa16.88■□□□□ 0.29
SSH2-208ENST00000579040 FOXO3O43524 673 aa16.87■□□□□ 0.29
SSH2-208ENST00000579040 RXRBP28702 533 aa16.87■□□□□ 0.29
SSH2-208ENST00000579040 PRAM1Q96QH2 718 aa16.87■□□□□ 0.29
SSH2-208ENST00000579040 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
SSH2-208ENST00000579040 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
SSH2-208ENST00000579040 POGKQ9P215 609 aa16.85■□□□□ 0.29
SSH2-208ENST00000579040 ANKARQ7Z5J8 1434 aa16.85■□□□□ 0.29
SSH2-208ENST00000579040 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
SSH2-208ENST00000579040 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
SSH2-208ENST00000579040 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
SSH2-208ENST00000579040 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
SSH2-208ENST00000579040 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
SSH2-208ENST00000579040 XPCQ01831 940 aaPredicted RBP16.83■□□□□ 0.28
SSH2-208ENST00000579040 EIF3AQ14152 1382 aaKnown RBP16.82■□□□□ 0.28
SSH2-208ENST00000579040 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSH2-208ENST00000579040 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
SSH2-208ENST00000579040 TRAK1Q9UPV9 953 aa16.82■□□□□ 0.28
SSH2-208ENST00000579040 SPATA31A3Q5VYP0 1347 aa16.81■□□□□ 0.28
SSH2-208ENST00000579040 RBM6P78332 1123 aaKnown RBP16.81■□□□□ 0.28
SSH2-208ENST00000579040 QTRT2Q9H974 415 aaKnown RBP16.81■□□□□ 0.28
SSH2-208ENST00000579040 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
SSH2-208ENST00000579040 FNBP4Q8N3X1 1017 aaPredicted RBP16.8■□□□□ 0.28
SSH2-208ENST00000579040 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
SSH2-208ENST00000579040 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
SSH2-208ENST00000579040 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.79■□□□□ 0.28
SSH2-208ENST00000579040 PSME1Q06323 249 aa16.79■□□□□ 0.28
SSH2-208ENST00000579040 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
SSH2-208ENST00000579040 SBNO1A3KN83 1393 aa16.78■□□□□ 0.28
SSH2-208ENST00000579040 USP21Q9UK80 565 aa16.78■□□□□ 0.28
SSH2-208ENST00000579040 RGS12O14924 1447 aa16.78■□□□□ 0.28
SSH2-208ENST00000579040 ABCA3Q99758 1704 aa16.77■□□□□ 0.28
SSH2-208ENST00000579040 TRPC5Q9UL62 973 aaPredicted RBP16.77■□□□□ 0.28
SSH2-208ENST00000579040 ATRNO75882 1429 aa16.77■□□□□ 0.27
SSH2-208ENST00000579040 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
SSH2-208ENST00000579040 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
SSH2-208ENST00000579040 ARHGEF10O15013 1369 aa16.76■□□□□ 0.27
SSH2-208ENST00000579040 WASLO00401 505 aaPredicted RBP16.75■□□□□ 0.27
SSH2-208ENST00000579040 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
SSH2-208ENST00000579040 BCL9LQ86UU0 1499 aa16.74■□□□□ 0.27
SSH2-208ENST00000579040 UPF1Q92900 1129 aaKnown RBP eCLIP16.74■□□□□ 0.27
SSH2-208ENST00000579040 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
SSH2-208ENST00000579040 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
SSH2-208ENST00000579040 PRR36Q9H6K5 1346 aa16.72■□□□□ 0.27
SSH2-208ENST00000579040 SLIT2O94813 1529 aa16.72■□□□□ 0.27
SSH2-208ENST00000579040 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
SSH2-208ENST00000579040 GPRASP1Q5JY77 1395 aa16.72■□□□□ 0.27
SSH2-208ENST00000579040 ATP7BP35670 1465 aa16.71■□□□□ 0.27
SSH2-208ENST00000579040 PLCH1Q4KWH8 1693 aa16.71■□□□□ 0.27
SSH2-208ENST00000579040 TOPAZ1Q8N9V7 1692 aa16.7■□□□□ 0.26
SSH2-208ENST00000579040 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
SSH2-208ENST00000579040 LMOD2Q6P5Q4 547 aa16.68■□□□□ 0.26
SSH2-208ENST00000579040 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
SSH2-208ENST00000579040 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
SSH2-208ENST00000579040 UNC5CLQ8IV45 518 aa16.67■□□□□ 0.26
SSH2-208ENST00000579040 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
SSH2-208ENST00000579040 GLI3P10071 1580 aa16.66■□□□□ 0.26
SSH2-208ENST00000579040 NBPF1Q3BBV0 1214 aa16.66■□□□□ 0.26
SSH2-208ENST00000579040 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
SSH2-208ENST00000579040 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
SSH2-208ENST00000579040 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
SSH2-208ENST00000579040 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
SSH2-208ENST00000579040 TRPM1Q7Z4N2 1603 aa16.65■□□□□ 0.26
SSH2-208ENST00000579040 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
SSH2-208ENST00000579040 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
SSH2-208ENST00000579040 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
SSH2-208ENST00000579040 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
SSH2-208ENST00000579040 NRAPQ86VF7 1730 aa16.63■□□□□ 0.25
SSH2-208ENST00000579040 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
SSH2-208ENST00000579040 POLR3AO14802 1390 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms