RNA–Protein interactions for RNA: ENST00000579021.1

RTTN-203, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-203ENST00000579021 METTL3Q86U44 580 aaKnown RBP8.99□□□□□ -0.97
RTTN-203ENST00000579021 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
RTTN-203ENST00000579021 MSS51Q4VC12 460 aa8.98□□□□□ -0.97
RTTN-203ENST00000579021 BRICD5Q6PL45 260 aa8.98□□□□□ -0.97
RTTN-203ENST00000579021 ARHGEF1Q92888 912 aaKnown RBP8.98□□□□□ -0.97
RTTN-203ENST00000579021 SALL2Q9Y467 1007 aaPredicted RBP8.98□□□□□ -0.97
RTTN-203ENST00000579021 FECHP22830 423 aa8.97□□□□□ -0.97
RTTN-203ENST00000579021 RNF19BQ6ZMZ0 732 aa8.96□□□□□ -0.98
RTTN-203ENST00000579021 IRF7Q92985 503 aa8.96□□□□□ -0.98
RTTN-203ENST00000579021 CFAP44Q96MT7 982 aa8.96□□□□□ -0.98
RTTN-203ENST00000579021 REPIN1Q9BWE0 567 aaKnown RBP8.96□□□□□ -0.98
RTTN-203ENST00000579021 DDX11L8A8MPP1 907 aa8.95□□□□□ -0.98
RTTN-203ENST00000579021 SUZ12Q15022 739 aaKnown RBP8.95□□□□□ -0.98
RTTN-203ENST00000579021 VEGFBP49765 207 aa8.94□□□□□ -0.98
RTTN-203ENST00000579021 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
RTTN-203ENST00000579021 DAXXQ9UER7 740 aaPredicted RBP8.94□□□□□ -0.98
RTTN-203ENST00000579021 GCGRP47871 477 aa8.92□□□□□ -0.98
RTTN-203ENST00000579021 NPAS3Q8IXF0 933 aa8.92□□□□□ -0.98
RTTN-203ENST00000579021 BMP1P13497 986 aa8.91□□□□□ -0.98
RTTN-203ENST00000579021 MMP16P51512 607 aa8.91□□□□□ -0.98
RTTN-203ENST00000579021 KCNV2Q8TDN2 545 aa8.91□□□□□ -0.98
RTTN-203ENST00000579021 ERBB4Q15303 1308 aa8.9□□□□□ -0.98
RTTN-203ENST00000579021 H3BM21 787 aa8.9□□□□□ -0.98
RTTN-203ENST00000579021 RC3H1Q5TC82 1133 aaKnown RBP8.9□□□□□ -0.98
RTTN-203ENST00000579021 HIC1Q14526 733 aa8.89□□□□□ -0.99
RTTN-203ENST00000579021 TRIM46Q7Z4K8 759 aa8.89□□□□□ -0.99
RTTN-203ENST00000579021 NLRP7Q8WX94 980 aa8.89□□□□□ -0.99
RTTN-203ENST00000579021 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
RTTN-203ENST00000579021 SKOR1P84550 965 aa8.88□□□□□ -0.99
RTTN-203ENST00000579021 SULF1Q8IWU6 871 aa8.87□□□□□ -0.99
RTTN-203ENST00000579021 GRIPAP1Q4V328 841 aa8.86□□□□□ -0.99
RTTN-203ENST00000579021 DXOO77932 396 aaKnown RBP8.85□□□□□ -0.99
RTTN-203ENST00000579021 WNT7BP56706 349 aa8.85□□□□□ -0.99
RTTN-203ENST00000579021 Q3C1V9 767 aa8.85□□□□□ -0.99
RTTN-203ENST00000579021 CCDC24Q8N4L8 307 aa8.85□□□□□ -0.99
RTTN-203ENST00000579021 CAPN5O15484 640 aaPredicted RBP8.83□□□□□ -1
RTTN-203ENST00000579021 USB1Q9BQ65 265 aaKnown RBP8.83□□□□□ -1
RTTN-203ENST00000579021 KCTD17Q8N5Z5 321 aa8.81□□□□□ -1
RTTN-203ENST00000579021 GNPATO15228 680 aa8.8□□□□□ -1
RTTN-203ENST00000579021 SEMA3EO15041 775 aa8.79□□□□□ -1
RTTN-203ENST00000579021 ZFP42Q96MM3 310 aa8.79□□□□□ -1
RTTN-203ENST00000579021 PHOX2BQ99453 314 aa8.79□□□□□ -1
RTTN-203ENST00000579021 WASF2Q9Y6W5 498 aa8.79□□□□□ -1
RTTN-203ENST00000579021 SIAH2O43255 324 aa8.78□□□□□ -1
RTTN-203ENST00000579021 KCNMA1Q12791 1236 aa8.78□□□□□ -1
RTTN-203ENST00000579021 EHBP1Q8NDI1 1231 aa8.78□□□□□ -1
RTTN-203ENST00000579021 GSK3AP49840 483 aa8.76□□□□□ -1.01
RTTN-203ENST00000579021 RBM26Q5T8P6 1007 aaKnown RBP8.75□□□□□ -1.01
RTTN-203ENST00000579021 GPR37O15354 613 aa8.74□□□□□ -1.01
RTTN-203ENST00000579021 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
RTTN-203ENST00000579021 HLA-CQ95604 372 aa8.73□□□□□ -1.01
RTTN-203ENST00000579021 SOBPA7XYQ1 873 aa8.71□□□□□ -1.02
RTTN-203ENST00000579021 KDM4AO75164 1064 aa8.71□□□□□ -1.02
RTTN-203ENST00000579021 CD46P15529 392 aa8.71□□□□□ -1.02
RTTN-203ENST00000579021 JUNDP17535 347 aa8.71□□□□□ -1.02
RTTN-203ENST00000579021 PTCRAQ6ISU1 281 aaPredicted RBP8.7□□□□□ -1.02
RTTN-203ENST00000579021 MRPL14Q6P1L8 145 aaKnown RBP8.7□□□□□ -1.02
RTTN-203ENST00000579021 TMEM151AQ8N4L1 468 aa8.7□□□□□ -1.02
RTTN-203ENST00000579021 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
RTTN-203ENST00000579021 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
RTTN-203ENST00000579021 P3H3Q8IVL6 736 aa8.68□□□□□ -1.02
RTTN-203ENST00000579021 NUDT12Q9BQG2 462 aa8.68□□□□□ -1.02
RTTN-203ENST00000579021 TLL2Q9Y6L7 1015 aa8.68□□□□□ -1.02
RTTN-203ENST00000579021 GDF11O95390 407 aa8.67□□□□□ -1.02
RTTN-203ENST00000579021 SH3BP2P78314 561 aa8.67□□□□□ -1.02
RTTN-203ENST00000579021 SCARF1Q14162 830 aa8.67□□□□□ -1.02
RTTN-203ENST00000579021 USP46P62068 366 aa8.66□□□□□ -1.02
RTTN-203ENST00000579021 RASSF7Q02833 373 aa8.66□□□□□ -1.02
RTTN-203ENST00000579021 HOXA2O43364 376 aa8.65□□□□□ -1.02
RTTN-203ENST00000579021 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
RTTN-203ENST00000579021 NNTQ13423 1086 aa8.65□□□□□ -1.02
RTTN-203ENST00000579021 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
RTTN-203ENST00000579021 TESPA1A2RU30 521 aaPredicted RBP8.64□□□□□ -1.03
RTTN-203ENST00000579021 TIMP2P16035 220 aa8.63□□□□□ -1.03
RTTN-203ENST00000579021 RNF225M0QZC1 329 aaPredicted RBP8.62□□□□□ -1.03
RTTN-203ENST00000579021 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
RTTN-203ENST00000579021 SMYD5Q6GMV2 418 aa8.62□□□□□ -1.03
RTTN-203ENST00000579021 ADH1CP00326 375 aa8.61□□□□□ -1.03
RTTN-203ENST00000579021 WDR4P57081 412 aaKnown RBP8.61□□□□□ -1.03
RTTN-203ENST00000579021 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
RTTN-203ENST00000579021 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
RTTN-203ENST00000579021 MAN1A2O60476 641 aa8.6□□□□□ -1.03
RTTN-203ENST00000579021 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
RTTN-203ENST00000579021 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
RTTN-203ENST00000579021 ADAMTS8Q9UP79 889 aa8.59□□□□□ -1.03
RTTN-203ENST00000579021 BAP1Q92560 729 aa8.58□□□□□ -1.04
RTTN-203ENST00000579021 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
RTTN-203ENST00000579021 MS4A1P11836 297 aa8.57□□□□□ -1.04
RTTN-203ENST00000579021 VARSP26640 1264 aaKnown RBP8.57□□□□□ -1.04
RTTN-203ENST00000579021 KRT76Q01546 638 aa8.57□□□□□ -1.04
RTTN-203ENST00000579021 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
RTTN-203ENST00000579021 MPNDQ8N594 471 aa8.57□□□□□ -1.04
RTTN-203ENST00000579021 KLF16Q9BXK1 252 aaPredicted RBP8.57□□□□□ -1.04
RTTN-203ENST00000579021 MDM2Q00987 491 aaPredicted RBP8.55□□□□□ -1.04
RTTN-203ENST00000579021 GPAT2Q6NUI2 795 aa8.55□□□□□ -1.04
RTTN-203ENST00000579021 ZNF511Q8NB15 262 aa8.55□□□□□ -1.04
RTTN-203ENST00000579021 CNTNAP3BQ96NU0 1288 aa8.55□□□□□ -1.04
RTTN-203ENST00000579021 CNTNAP3Q9BZ76 1288 aa8.55□□□□□ -1.04
RTTN-203ENST00000579021 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
RTTN-203ENST00000579021 ZIC2O95409 532 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms