RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
TRAF4-213ENST00000578917 NBPF1Q3BBV0 1214 aa9.36□□□□□ -0.91
TRAF4-213ENST00000578917 MST1RQ04912 1400 aa9.36□□□□□ -0.91
TRAF4-213ENST00000578917 TONSLQ96HA7 1378 aa9.36□□□□□ -0.91
TRAF4-213ENST00000578917 JCADQ9P266 1359 aa9.36□□□□□ -0.91
TRAF4-213ENST00000578917 C1orf167Q5SNV9 1468 aa9.35□□□□□ -0.91
TRAF4-213ENST00000578917 NRXN1Q9ULB1 1477 aa9.35□□□□□ -0.91
TRAF4-213ENST00000578917 XPCQ01831 940 aaPredicted RBP9.35□□□□□ -0.91
TRAF4-213ENST00000578917 PSME1Q06323 249 aa9.35□□□□□ -0.91
TRAF4-213ENST00000578917 NPHP3Q7Z494 1330 aa9.34□□□□□ -0.91
TRAF4-213ENST00000578917 XRN1Q8IZH2 1706 aaKnown RBP9.34□□□□□ -0.91
TRAF4-213ENST00000578917 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.34□□□□□ -0.91
TRAF4-213ENST00000578917 TECPR2O15040 1411 aa9.34□□□□□ -0.91
TRAF4-213ENST00000578917 XIRP1Q702N8 1843 aaKnown RBP9.34□□□□□ -0.91
TRAF4-213ENST00000578917 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
TRAF4-213ENST00000578917 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
TRAF4-213ENST00000578917 ROBO1Q9Y6N7 1651 aa9.34□□□□□ -0.91
TRAF4-213ENST00000578917 SPATA31A6Q5VVP1 1343 aa9.33□□□□□ -0.92
TRAF4-213ENST00000578917 WASLO00401 505 aaPredicted RBP9.33□□□□□ -0.92
TRAF4-213ENST00000578917 PLEKHG5O94827 1062 aa9.33□□□□□ -0.92
TRAF4-213ENST00000578917 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
TRAF4-213ENST00000578917 CCER1Q8TC90 406 aaPredicted RBP9.33□□□□□ -0.92
TRAF4-213ENST00000578917 PRAG1Q86YV5 1406 aa9.32□□□□□ -0.92
TRAF4-213ENST00000578917 ADAMTS2O95450 1211 aa9.32□□□□□ -0.92
TRAF4-213ENST00000578917 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
TRAF4-213ENST00000578917 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
TRAF4-213ENST00000578917 KRT28Q7Z3Y7 464 aa9.32□□□□□ -0.92
TRAF4-213ENST00000578917 NGDNQ8NEJ9 315 aaKnown RBP9.32□□□□□ -0.92
TRAF4-213ENST00000578917 CDK19Q9BWU1 502 aa9.32□□□□□ -0.92
TRAF4-213ENST00000578917 SRPK2P78362 688 aaKnown RBP9.31□□□□□ -0.92
TRAF4-213ENST00000578917 NGLY1Q96IV0 654 aa9.31□□□□□ -0.92
TRAF4-213ENST00000578917 ROCK2O75116 1388 aaKnown RBP9.31□□□□□ -0.92
TRAF4-213ENST00000578917 ASXL1Q8IXJ9 1541 aa9.31□□□□□ -0.92
TRAF4-213ENST00000578917 CENPJQ9HC77 1338 aaPredicted RBP9.31□□□□□ -0.92
TRAF4-213ENST00000578917 EIF3AQ14152 1382 aaKnown RBP9.3□□□□□ -0.92
TRAF4-213ENST00000578917 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
TRAF4-213ENST00000578917 NUDT16Q96DE0 195 aaKnown RBP9.3□□□□□ -0.92
TRAF4-213ENST00000578917 CARD11Q9BXL7 1154 aa9.3□□□□□ -0.92
TRAF4-213ENST00000578917 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
TRAF4-213ENST00000578917 IFT172Q9UG01 1749 aa9.29□□□□□ -0.92
TRAF4-213ENST00000578917 ZNF772Q68DY9 489 aaPredicted RBP9.29□□□□□ -0.92
TRAF4-213ENST00000578917 C8orf37Q96NL8 207 aa9.29□□□□□ -0.92
TRAF4-213ENST00000578917 PHLPP1O60346 1717 aa9.28□□□□□ -0.92
TRAF4-213ENST00000578917 LAMC1P11047 1609 aa9.28□□□□□ -0.92
TRAF4-213ENST00000578917 GPRASP1Q5JY77 1395 aa9.28□□□□□ -0.92
TRAF4-213ENST00000578917 NBPF8Q3BBV2 869 aa9.28□□□□□ -0.92
TRAF4-213ENST00000578917 SETD1AO15047 1707 aaKnown RBP9.28□□□□□ -0.92
TRAF4-213ENST00000578917 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
TRAF4-213ENST00000578917 CCDC61Q9Y6R9 512 aa9.27□□□□□ -0.93
TRAF4-213ENST00000578917 ADGRB1O14514 1584 aa9.27□□□□□ -0.93
TRAF4-213ENST00000578917 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
TRAF4-213ENST00000578917 EVC2Q86UK5 1308 aa9.27□□□□□ -0.93
TRAF4-213ENST00000578917 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
TRAF4-213ENST00000578917 PNPLA6Q8IY17 1366 aa9.26□□□□□ -0.93
TRAF4-213ENST00000578917 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
TRAF4-213ENST00000578917 CDC42BPGQ6DT37 1551 aa9.26□□□□□ -0.93
TRAF4-213ENST00000578917 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
TRAF4-213ENST00000578917 AHDC1Q5TGY3 1603 aaPredicted RBP9.26□□□□□ -0.93
TRAF4-213ENST00000578917 ANKARQ7Z5J8 1434 aa9.25□□□□□ -0.93
TRAF4-213ENST00000578917 POTEAQ6S8J7 498 aa9.25□□□□□ -0.93
TRAF4-213ENST00000578917 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
TRAF4-213ENST00000578917 AFF2P51816 1311 aa9.25□□□□□ -0.93
TRAF4-213ENST00000578917 SPATA31A3Q5VYP0 1347 aa9.25□□□□□ -0.93
TRAF4-213ENST00000578917 PRR36Q9H6K5 1346 aa9.25□□□□□ -0.93
TRAF4-213ENST00000578917 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
TRAF4-213ENST00000578917 RXRBP28702 533 aa9.24□□□□□ -0.93
TRAF4-213ENST00000578917 CABLES1Q8TDN4 633 aa9.24□□□□□ -0.93
TRAF4-213ENST00000578917 QTRT2Q9H974 415 aaKnown RBP9.24□□□□□ -0.93
TRAF4-213ENST00000578917 CABP1Q9NZU7 370 aa9.24□□□□□ -0.93
TRAF4-213ENST00000578917 ACEP12821 1306 aa9.24□□□□□ -0.93
TRAF4-213ENST00000578917 COL16A1Q07092 1604 aaPredicted RBP9.23□□□□□ -0.93
TRAF4-213ENST00000578917 USP21Q9UK80 565 aa9.23□□□□□ -0.93
TRAF4-213ENST00000578917 PLEKHG3A1L390 1219 aa9.22□□□□□ -0.93
TRAF4-213ENST00000578917 NUTM2GQ5VZR2 741 aa9.22□□□□□ -0.93
TRAF4-213ENST00000578917 ABTB2Q8N961 1025 aa9.22□□□□□ -0.93
TRAF4-213ENST00000578917 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
TRAF4-213ENST00000578917 ARHGEF10O15013 1369 aa9.22□□□□□ -0.93
TRAF4-213ENST00000578917 KNDC1Q76NI1 1749 aa9.22□□□□□ -0.93
TRAF4-213ENST00000578917 SLC24A1O60721 1099 aa9.21□□□□□ -0.94
TRAF4-213ENST00000578917 CCDC9Q9Y3X0 531 aaKnown RBP9.21□□□□□ -0.94
TRAF4-213ENST00000578917 SBNO1A3KN83 1393 aa9.21□□□□□ -0.94
TRAF4-213ENST00000578917 PXDNQ92626 1479 aa9.21□□□□□ -0.94
TRAF4-213ENST00000578917 LRP6O75581 1613 aa9.2□□□□□ -0.94
TRAF4-213ENST00000578917 ST20-MTHFSA0A0A6YYL1 179 aa9.2□□□□□ -0.94
TRAF4-213ENST00000578917 TRPC5Q9UL62 973 aaPredicted RBP9.2□□□□□ -0.94
TRAF4-213ENST00000578917 TULP4Q9NRJ4 1543 aa9.2□□□□□ -0.94
TRAF4-213ENST00000578917 RBM6P78332 1123 aaKnown RBP9.19□□□□□ -0.94
TRAF4-213ENST00000578917 FNBP4Q8N3X1 1017 aaPredicted RBP9.19□□□□□ -0.94
TRAF4-213ENST00000578917 ZNF692Q9BU19 519 aaPredicted RBP9.19□□□□□ -0.94
TRAF4-213ENST00000578917 TNS3Q68CZ2 1445 aa9.19□□□□□ -0.94
TRAF4-213ENST00000578917 PPIP5K1Q6PFW1 1433 aa9.19□□□□□ -0.94
TRAF4-213ENST00000578917 ZBTB7CA1YPR0 619 aa9.18□□□□□ -0.94
TRAF4-213ENST00000578917 NLRP6P59044 892 aa9.18□□□□□ -0.94
TRAF4-213ENST00000578917 NHSL1Q5SYE7 1610 aa9.18□□□□□ -0.94
TRAF4-213ENST00000578917 NLRP13Q86W25 1043 aa9.18□□□□□ -0.94
TRAF4-213ENST00000578917 PRDM11Q9NQV5 511 aa9.18□□□□□ -0.94
TRAF4-213ENST00000578917 FMN2Q9NZ56 1722 aa9.18□□□□□ -0.94
TRAF4-213ENST00000578917 KIAA1210Q9ULL0 1709 aa9.18□□□□□ -0.94
TRAF4-213ENST00000578917 FAM83GA6ND36 823 aa9.17□□□□□ -0.94
TRAF4-213ENST00000578917 ZC3H6P61129 1189 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms