RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 POM121CA8CG34 1229 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 NCLP19338 710 aaKnown RBP6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 LSM11P83369 360 aaKnown RBP eCLIP6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 CFAP70Q5T0N1 1121 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 PACS2Q86VP3 889 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 MRRFQ96E11 262 aaKnown RBP6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 POLR3GLQ9BT43 218 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 KIAA1468Q9P260 1216 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 RABGEF1Q9UJ41 708 aa6.33□□□□□ -1.4
GAPLINC-201ENST00000578664 BHMG1C9JSJ3 638 aaPredicted RBP6.32□□□□□ -1.4
GAPLINC-201ENST00000578664 DIXDC1Q155Q3 683 aa6.32□□□□□ -1.4
GAPLINC-201ENST00000578664 MYSM1Q5VVJ2 828 aa6.32□□□□□ -1.4
GAPLINC-201ENST00000578664 B4GALNT3Q6L9W6 998 aa6.32□□□□□ -1.4
GAPLINC-201ENST00000578664 MTMR14Q8NCE2 650 aa6.32□□□□□ -1.4
GAPLINC-201ENST00000578664 TATDN2Q93075 761 aa6.32□□□□□ -1.4
GAPLINC-201ENST00000578664 POTEMA6NI47 508 aa6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 NBPF26B4DH59 902 aa6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 RFX1P22670 979 aa6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 HDGFL1Q5TGJ6 251 aa6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 POTEGQ6S5H5 508 aa6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 NUDT18Q6ZVK8 323 aa6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 RBM46Q8TBY0 533 aaKnown RBP6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 SREK1Q8WXA9 508 aaKnown RBP6.31□□□□□ -1.4
GAPLINC-201ENST00000578664 TMEM88BA6NKF7 163 aa6.3□□□□□ -1.4
GAPLINC-201ENST00000578664 HRO43593 1189 aa6.3□□□□□ -1.4
GAPLINC-201ENST00000578664 ATG7O95352 703 aa6.3□□□□□ -1.4
GAPLINC-201ENST00000578664 ABL2P42684 1182 aa6.3□□□□□ -1.4
GAPLINC-201ENST00000578664 ADGRD1Q6QNK2 874 aa6.3□□□□□ -1.4
GAPLINC-201ENST00000578664 PPP1R12CQ9BZL4 782 aa6.3□□□□□ -1.4
GAPLINC-201ENST00000578664 TCF3P15923 654 aa6.29□□□□□ -1.4
GAPLINC-201ENST00000578664 MDM2Q00987 491 aaPredicted RBP6.29□□□□□ -1.4
GAPLINC-201ENST00000578664 ANKRD13AQ8IZ07 590 aa6.29□□□□□ -1.4
GAPLINC-201ENST00000578664 FAM217BQ9NTX9 383 aaPredicted RBP6.29□□□□□ -1.4
GAPLINC-201ENST00000578664 PNMA3Q9UL41 463 aa6.29□□□□□ -1.4
GAPLINC-201ENST00000578664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 CARNS1A5YM72 827 aa6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 RCCD1A6NED2 376 aa6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 SMARCA5O60264 1052 aaPredicted RBP6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 WASHC4Q2M389 1173 aa6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 TUSC1Q2TAM9 212 aa6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 DNAJC14Q6Y2X3 702 aaPredicted RBP6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 CCER1Q8TC90 406 aaPredicted RBP6.28□□□□□ -1.4
GAPLINC-201ENST00000578664 SMAPO00193 183 aa6.27□□□□□ -1.41
GAPLINC-201ENST00000578664 ZNF16P17020 682 aaPredicted RBP6.27□□□□□ -1.41
GAPLINC-201ENST00000578664 LAPTM4BQ86VI4 370 aa6.27□□□□□ -1.41
GAPLINC-201ENST00000578664 CDAN1Q8IWY9 1227 aa6.27□□□□□ -1.41
GAPLINC-201ENST00000578664 TMEM134Q9H6X4 195 aa6.27□□□□□ -1.41
GAPLINC-201ENST00000578664 VAMP1P23763 118 aa6.26□□□□□ -1.41
GAPLINC-201ENST00000578664 DNAJB2P25686 324 aa6.26□□□□□ -1.41
GAPLINC-201ENST00000578664 FAM98CQ17RN3 349 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-201ENST00000578664 NLRP7Q8WX94 980 aa6.26□□□□□ -1.41
GAPLINC-201ENST00000578664 UBXN4Q92575 508 aa6.26□□□□□ -1.41
GAPLINC-201ENST00000578664 CWC22Q9HCG8 908 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-201ENST00000578664 SEPT9Q9UHD8 586 aaPredicted RBP6.26□□□□□ -1.41
GAPLINC-201ENST00000578664 FBXO31Q5XUX0 539 aaPredicted RBP6.25□□□□□ -1.41
GAPLINC-201ENST00000578664 ANKRD13DQ6ZTN6 518 aa6.25□□□□□ -1.41
GAPLINC-201ENST00000578664 DHX37Q8IY37 1157 aaKnown RBP6.25□□□□□ -1.41
GAPLINC-201ENST00000578664 ADAMTS19Q8TE59 1207 aa6.25□□□□□ -1.41
GAPLINC-201ENST00000578664 TBC1D2Q9BYX2 928 aa6.25□□□□□ -1.41
GAPLINC-201ENST00000578664 NBPF3Q9H094 633 aa6.25□□□□□ -1.41
GAPLINC-201ENST00000578664 TBC1D2BQ9UPU7 963 aa6.25□□□□□ -1.41
GAPLINC-201ENST00000578664 PALM3A6NDB9 673 aaPredicted RBP6.24□□□□□ -1.41
GAPLINC-201ENST00000578664 ZC3H6P61129 1189 aaKnown RBP6.24□□□□□ -1.41
GAPLINC-201ENST00000578664 ZC3H4Q9UPT8 1303 aaKnown RBP6.24□□□□□ -1.41
GAPLINC-201ENST00000578664 LMOD1P29536 600 aaPredicted RBP6.23□□□□□ -1.41
GAPLINC-201ENST00000578664 BCL2L13Q9BXK5 485 aa6.23□□□□□ -1.41
GAPLINC-201ENST00000578664 ARID4BQ4LE39 1312 aaPredicted RBP6.23□□□□□ -1.41
GAPLINC-201ENST00000578664 SF3A1Q15459 793 aaKnown RBP6.22□□□□□ -1.41
GAPLINC-201ENST00000578664 RIC3Q7Z5B4 369 aa6.22□□□□□ -1.41
GAPLINC-201ENST00000578664 MRPL50Q8N5N7 158 aaKnown RBP6.22□□□□□ -1.41
GAPLINC-201ENST00000578664 ZFRQ96KR1 1074 aaKnown RBP6.22□□□□□ -1.41
GAPLINC-201ENST00000578664 ALG2Q9H553 416 aa6.22□□□□□ -1.41
GAPLINC-201ENST00000578664 PCDH10Q9P2E7 1040 aa6.22□□□□□ -1.41
GAPLINC-201ENST00000578664 SWT1Q5T5J6 900 aaKnown RBP6.21□□□□□ -1.42
GAPLINC-201ENST00000578664 CERS3Q8IU89 383 aa6.21□□□□□ -1.42
GAPLINC-201ENST00000578664 LIMD1Q9UGP4 676 aa6.21□□□□□ -1.42
GAPLINC-201ENST00000578664 CD46P15529 392 aa6.2□□□□□ -1.42
GAPLINC-201ENST00000578664 ARID4AP29374 1257 aaPredicted RBP6.2□□□□□ -1.42
GAPLINC-201ENST00000578664 ELOAQ14241 798 aaKnown RBP6.2□□□□□ -1.42
GAPLINC-201ENST00000578664 ZNF326Q5BKZ1 582 aaKnown RBP6.2□□□□□ -1.42
GAPLINC-201ENST00000578664 TFIP11Q9UBB9 837 aaKnown RBP6.2□□□□□ -1.42
GAPLINC-201ENST00000578664 NDUFB9Q9Y6M9 179 aa6.2□□□□□ -1.42
GAPLINC-201ENST00000578664 ANKRD62A6NC57 917 aa6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 SPTLC1O15269 473 aa6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 SLC10A3P09131 477 aa6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 GJA5P36382 358 aa6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 NOM1Q5C9Z4 860 aaKnown RBP6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 CC2D2BQ6DHV5 1058 aa6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 SAMD7Q7Z3H4 446 aa6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 SULF1Q8IWU6 871 aa6.19□□□□□ -1.42
GAPLINC-201ENST00000578664 SOX11P35716 441 aa6.18□□□□□ -1.42
GAPLINC-201ENST00000578664 UBE2Q2Q8WVN8 375 aa6.18□□□□□ -1.42
GAPLINC-201ENST00000578664 HIRIP3Q9BW71 556 aaPredicted RBP6.18□□□□□ -1.42
GAPLINC-201ENST00000578664 SOWAHBA6NEL2 793 aa6.17□□□□□ -1.42
GAPLINC-201ENST00000578664 HDGFP51858 240 aaKnown RBP6.17□□□□□ -1.42
GAPLINC-201ENST00000578664 PHLDB3Q6NSJ2 640 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms