RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	RBM6	P78332	1123 aa	Known RBP	19.88	■□□□□ 0.77
CSNK1D-208	ENST00000578501	LRRC59	Q96AG4	307 aa	Known RBP	19.88	■□□□□ 0.77
CSNK1D-208	ENST00000578501	DCAF11	Q8TEB1	546 aa		19.87	■□□□□ 0.77
CSNK1D-208	ENST00000578501	QTRT2	Q9H974	415 aa	Known RBP	19.87	■□□□□ 0.77
CSNK1D-208	ENST00000578501	LAMC1	P11047	1609 aa		19.87	■□□□□ 0.77
CSNK1D-208	ENST00000578501	DHX57	Q6P158	1386 aa	Known RBP	19.86	■□□□□ 0.77
CSNK1D-208	ENST00000578501	CFAP70	Q5T0N1	1121 aa		19.86	■□□□□ 0.77
CSNK1D-208	ENST00000578501	TMEM132E	Q6IEE7	984 aa		19.86	■□□□□ 0.77
CSNK1D-208	ENST00000578501	ASXL1	Q8IXJ9	1541 aa		19.86	■□□□□ 0.77
CSNK1D-208	ENST00000578501	SIRT1	Q96EB6	747 aa		19.85	■□□□□ 0.77
CSNK1D-208	ENST00000578501	YTHDC2	Q9H6S0	1430 aa	Known RBP	19.85	■□□□□ 0.77
CSNK1D-208	ENST00000578501	NGLY1	Q96IV0	654 aa		19.84	■□□□□ 0.77
CSNK1D-208	ENST00000578501	C8orf37	Q96NL8	207 aa		19.83	■□□□□ 0.77
CSNK1D-208	ENST00000578501	STK26	Q9P289	416 aa		19.83	■□□□□ 0.77
CSNK1D-208	ENST00000578501	KDM2A	Q9Y2K7	1162 aa		19.83	■□□□□ 0.77
CSNK1D-208	ENST00000578501	MST1R	Q04912	1400 aa		19.83	■□□□□ 0.76
CSNK1D-208	ENST00000578501	KNDC1	Q76NI1	1749 aa		19.82	■□□□□ 0.76
CSNK1D-208	ENST00000578501	NALCN	Q8IZF0	1738 aa		19.82	■□□□□ 0.76
CSNK1D-208	ENST00000578501	RGS12	O14924	1447 aa		19.81	■□□□□ 0.76
CSNK1D-208	ENST00000578501	WAPL	Q7Z5K2	1190 aa		19.78	■□□□□ 0.76
CSNK1D-208	ENST00000578501	ATAD2	Q6PL18	1390 aa		19.78	■□□□□ 0.76
CSNK1D-208	ENST00000578501	ADGRB1	O14514	1584 aa		19.78	■□□□□ 0.76
CSNK1D-208	ENST00000578501	ZRANB1	Q9UGI0	708 aa		19.77	■□□□□ 0.76
CSNK1D-208	ENST00000578501	C1orf167	Q5SNV9	1468 aa		19.76	■□□□□ 0.75
CSNK1D-208	ENST00000578501	DLC1	Q96QB1	1528 aa		19.76	■□□□□ 0.75
CSNK1D-208	ENST00000578501	CDC42BPG	Q6DT37	1551 aa		19.75	■□□□□ 0.75
CSNK1D-208	ENST00000578501	PNPLA6	Q8IY17	1366 aa		19.75	■□□□□ 0.75
CSNK1D-208	ENST00000578501	PLEKHH1	Q9ULM0	1364 aa		19.75	■□□□□ 0.75
CSNK1D-208	ENST00000578501	NHSL1	Q5SYE7	1610 aa		19.74	■□□□□ 0.75
CSNK1D-208	ENST00000578501	SIN3A	Q96ST3	1273 aa		19.73	■□□□□ 0.75
CSNK1D-208	ENST00000578501	ADAMTS2	O95450	1211 aa		19.71	■□□□□ 0.75
CSNK1D-208	ENST00000578501	CCDC125	Q86Z20	511 aa		19.71	■□□□□ 0.75
CSNK1D-208	ENST00000578501	L3MBTL2	Q969R5	705 aa		19.71	■□□□□ 0.75
CSNK1D-208	ENST00000578501	PRAM1	Q96QH2	718 aa		19.71	■□□□□ 0.75
CSNK1D-208	ENST00000578501	TRPC5	Q9UL62	973 aa	Predicted RBP	19.71	■□□□□ 0.75
CSNK1D-208	ENST00000578501	USP21	Q9UK80	565 aa		19.7	■□□□□ 0.74
CSNK1D-208	ENST00000578501	KIAA1210	Q9ULL0	1709 aa		19.69	■□□□□ 0.74
CSNK1D-208	ENST00000578501	TRAK1	Q9UPV9	953 aa		19.69	■□□□□ 0.74
CSNK1D-208	ENST00000578501	NEUROD1	Q13562	356 aa		19.68	■□□□□ 0.74
CSNK1D-208	ENST00000578501	DDX17	Q92841	729 aa	Known RBP	19.68	■□□□□ 0.74
CSNK1D-208	ENST00000578501	POGK	Q9P215	609 aa		19.68	■□□□□ 0.74
CSNK1D-208	ENST00000578501	ORAI2	Q96SN7	254 aa		19.67	■□□□□ 0.74
CSNK1D-208	ENST00000578501	FNBP4	Q8N3X1	1017 aa	Predicted RBP	19.66	■□□□□ 0.74
CSNK1D-208	ENST00000578501	ESCO1	Q5FWF5	840 aa		19.64	■□□□□ 0.73
CSNK1D-208	ENST00000578501	FMN2	Q9NZ56	1722 aa		19.63	■□□□□ 0.73
CSNK1D-208	ENST00000578501	SOS2	Q07890	1332 aa	Predicted RBP	19.63	■□□□□ 0.73
CSNK1D-208	ENST00000578501	SAFB2	Q14151	953 aa	Known RBP eCLIP	19.63	■□□□□ 0.73
CSNK1D-208	ENST00000578501	ADGRB2	O60241	1585 aa		19.62	■□□□□ 0.73
CSNK1D-208	ENST00000578501	NBPF1	Q3BBV0	1214 aa		19.62	■□□□□ 0.73
CSNK1D-208	ENST00000578501	NPHP3	Q7Z494	1330 aa		19.61	■□□□□ 0.73
CSNK1D-208	ENST00000578501	ATRN	O75882	1429 aa		19.6	■□□□□ 0.73
CSNK1D-208	ENST00000578501	NUTM2F	A1L443	756 aa		19.6	■□□□□ 0.73
CSNK1D-208	ENST00000578501	ARHGEF28	Q8N1W1	1705 aa	Known RBP	19.59	■□□□□ 0.73
CSNK1D-208	ENST00000578501	ANKAR	Q7Z5J8	1434 aa		19.59	■□□□□ 0.73
CSNK1D-208	ENST00000578501	EIF3A	Q14152	1382 aa	Known RBP	19.57	■□□□□ 0.72
CSNK1D-208	ENST00000578501	MINK1	Q8N4C8	1332 aa	Predicted RBP	19.57	■□□□□ 0.72
CSNK1D-208	ENST00000578501	WASL	O00401	505 aa	Predicted RBP	19.57	■□□□□ 0.72
CSNK1D-208	ENST00000578501	SRCAP	Q6ZRS2	3230 aa		19.57	■□□□□ 0.72
CSNK1D-208	ENST00000578501	FOXO3	O43524	673 aa		19.56	■□□□□ 0.72
CSNK1D-208	ENST00000578501	HIRIP3	Q9BW71	556 aa	Predicted RBP	19.56	■□□□□ 0.72
CSNK1D-208	ENST00000578501	TONSL	Q96HA7	1378 aa		19.56	■□□□□ 0.72
CSNK1D-208	ENST00000578501	KIF1A	Q12756	1690 aa		19.56	■□□□□ 0.72
CSNK1D-208	ENST00000578501	PXDN	Q92626	1479 aa		19.55	■□□□□ 0.72
CSNK1D-208	ENST00000578501	PCGF6	Q9BYE7	350 aa		19.55	■□□□□ 0.72
CSNK1D-208	ENST00000578501	PHF8	Q9UPP1	1060 aa		19.55	■□□□□ 0.72
CSNK1D-208	ENST00000578501	TRPM1	Q7Z4N2	1603 aa		19.54	■□□□□ 0.72
CSNK1D-208	ENST00000578501	TULP4	Q9NRJ4	1543 aa		19.53	■□□□□ 0.72
CSNK1D-208	ENST00000578501	GJD4	Q96KN9	370 aa	Predicted RBP	19.53	■□□□□ 0.72
CSNK1D-208	ENST00000578501	NBPF8	Q3BBV2	869 aa		19.52	■□□□□ 0.72
CSNK1D-208	ENST00000578501	ROCK2	O75116	1388 aa	Known RBP	19.52	■□□□□ 0.72
CSNK1D-208	ENST00000578501	USP32	Q8NFA0	1604 aa		19.51	■□□□□ 0.71
CSNK1D-208	ENST00000578501	BCL9L	Q86UU0	1499 aa		19.51	■□□□□ 0.71
CSNK1D-208	ENST00000578501	COL22A1	Q8NFW1	1626 aa	Predicted RBP	19.51	■□□□□ 0.71
CSNK1D-208	ENST00000578501	CLSPN	Q9HAW4	1339 aa		19.51	■□□□□ 0.71
CSNK1D-208	ENST00000578501	CENPJ	Q9HC77	1338 aa	Predicted RBP	19.51	■□□□□ 0.71
CSNK1D-208	ENST00000578501	RGPD8	O14715	1765 aa	Predicted RBP	19.5	■□□□□ 0.71
CSNK1D-208	ENST00000578501	GPRASP1	Q5JY77	1395 aa		19.5	■□□□□ 0.71
CSNK1D-208	ENST00000578501	BLM	P54132	1417 aa	Predicted RBP	19.5	■□□□□ 0.71
CSNK1D-208	ENST00000578501	PRR36	Q9H6K5	1346 aa		19.5	■□□□□ 0.71
CSNK1D-208	ENST00000578501	SF3B2	Q13435	895 aa	Known RBP	19.49	■□□□□ 0.71
CSNK1D-208	ENST00000578501	XPC	Q01831	940 aa	Predicted RBP	19.48	■□□□□ 0.71
CSNK1D-208	ENST00000578501	PSME1	Q06323	249 aa		19.48	■□□□□ 0.71
CSNK1D-208	ENST00000578501	KRT28	Q7Z3Y7	464 aa		19.48	■□□□□ 0.71
CSNK1D-208	ENST00000578501	CDK19	Q9BWU1	502 aa		19.48	■□□□□ 0.71
CSNK1D-208	ENST00000578501	SPATA31A3	Q5VYP0	1347 aa		19.47	■□□□□ 0.71
CSNK1D-208	ENST00000578501	SBNO1	A3KN83	1393 aa		19.46	■□□□□ 0.71
CSNK1D-208	ENST00000578501	NUDT16	Q96DE0	195 aa	Known RBP	19.46	■□□□□ 0.71
CSNK1D-208	ENST00000578501	UNC5CL	Q8IV45	518 aa		19.45	■□□□□ 0.7
CSNK1D-208	ENST00000578501	PMFBP1	Q8TBY8	1022 aa		19.45	■□□□□ 0.7
CSNK1D-208	ENST00000578501	ATP7B	P35670	1465 aa		19.45	■□□□□ 0.7
CSNK1D-208	ENST00000578501	RALGAPB	Q86X10	1494 aa		19.44	■□□□□ 0.7
CSNK1D-208	ENST00000578501	CCDC61	Q9Y6R9	512 aa		19.44	■□□□□ 0.7
CSNK1D-208	ENST00000578501	TIMELESS	Q9UNS1	1208 aa		19.43	■□□□□ 0.7
CSNK1D-208	ENST00000578501	TNS3	Q68CZ2	1445 aa		19.42	■□□□□ 0.7
CSNK1D-208	ENST00000578501	QRICH2	Q9H0J4	1663 aa		19.42	■□□□□ 0.7
CSNK1D-208	ENST00000578501	CARD11	Q9BXL7	1154 aa		19.41	■□□□□ 0.7
CSNK1D-208	ENST00000578501	ITSN1	Q15811	1721 aa		19.41	■□□□□ 0.7
CSNK1D-208	ENST00000578501	PLEKHG3	A1L390	1219 aa		19.4	■□□□□ 0.7
CSNK1D-208	ENST00000578501	DEFB132	Q7Z7B7	95 aa		19.4	■□□□□ 0.7
CSNK1D-208	ENST00000578501	NGDN	Q8NEJ9	315 aa	Known RBP	19.4	■□□□□ 0.7

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