RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.52□□□□□ -1.377e-10■■■■□ 24.2
PTPRM-206ENST00000578093 ZNF777Q9ULD5 760 aaPredicted RBP6.52□□□□□ -1.37
PTPRM-206ENST00000578093 VWDEQ8N2E2 1590 aa6.52□□□□□ -1.37
PTPRM-206ENST00000578093 SPAG9O60271 1321 aaKnown RBP6.51□□□□□ -1.37
PTPRM-206ENST00000578093 IFFO2Q5TF58 517 aa6.51□□□□□ -1.37
PTPRM-206ENST00000578093 A2ML1A8K2U0 1454 aa6.51□□□□□ -1.37
PTPRM-206ENST00000578093 KIAA1107Q9UPP5 1409 aa6.5□□□□□ -1.37
PTPRM-206ENST00000578093 EHBP1L1Q8N3D4 1523 aa6.5□□□□□ -1.37
PTPRM-206ENST00000578093 KDM5DQ9BY66 1539 aa6.5□□□□□ -1.37
PTPRM-206ENST00000578093 PLEKHH2Q8IVE3 1493 aa6.5□□□□□ -1.37
PTPRM-206ENST00000578093 MBD5Q9P267 1494 aa6.5□□□□□ -1.37
PTPRM-206ENST00000578093 UBAP1LF5GYI3 381 aa6.5□□□□□ -1.37
PTPRM-206ENST00000578093 L3MBTL3Q96JM7 780 aaPredicted RBP6.5□□□□□ -1.37
PTPRM-206ENST00000578093 IQGAP1P46940 1657 aa6.49□□□□□ -1.37
PTPRM-206ENST00000578093 ZC3H13Q5T200 1668 aaKnown RBP6.49□□□□□ -1.37
PTPRM-206ENST00000578093 CEP152O94986 1710 aa6.49□□□□□ -1.37
PTPRM-206ENST00000578093 CPS1P31327 1500 aa6.49□□□□□ -1.37
PTPRM-206ENST00000578093 ZNF644Q9H582 1327 aaPredicted RBP6.49□□□□□ -1.37
PTPRM-206ENST00000578093 XIRP1Q702N8 1843 aaKnown RBP6.48□□□□□ -1.37
PTPRM-206ENST00000578093 PZPP20742 1482 aa6.48□□□□□ -1.37
PTPRM-206ENST00000578093 DEPDC5O75140 1603 aa6.48□□□□□ -1.37
PTPRM-206ENST00000578093 MROH1Q8NDA8 1641 aa6.48□□□□□ -1.37
PTPRM-206ENST00000578093 RNF17Q9BXT8 1623 aaKnown RBP6.48□□□□□ -1.37
PTPRM-206ENST00000578093 A0A0G2JS52 829 aa6.48□□□□□ -1.37
PTPRM-206ENST00000578093 GGT6Q6P531 493 aa6.48□□□□□ -1.37
PTPRM-206ENST00000578093 CAMSAP2Q08AD1 1489 aa6.47□□□□□ -1.37
PTPRM-206ENST00000578093 SHANK2Q9UPX8 1470 aa6.47□□□□□ -1.37
PTPRM-206ENST00000578093 CCNB3Q8WWL7 1395 aa6.47□□□□□ -1.37
PTPRM-206ENST00000578093 HSPA1LP34931 641 aa6.47□□□□□ -1.37
PTPRM-206ENST00000578093 DOK7Q18PE1 504 aa6.47□□□□□ -1.37
PTPRM-206ENST00000578093 ZNF775Q96BV0 537 aaPredicted RBP6.47□□□□□ -1.37
PTPRM-206ENST00000578093 SYNMO15061 1565 aa6.47□□□□□ -1.37
PTPRM-206ENST00000578093 CCDC141Q6ZP82 1450 aa6.47□□□□□ -1.37
PTPRM-206ENST00000578093 MTUS2Q5JR59 1369 aa6.46□□□□□ -1.37
PTPRM-206ENST00000578093 TNRQ92752 1358 aa6.46□□□□□ -1.37
PTPRM-206ENST00000578093 FAM135AQ9P2D6 1515 aa6.46□□□□□ -1.37
PTPRM-206ENST00000578093 G3V3G9 751 aa6.46□□□□□ -1.38
PTPRM-206ENST00000578093 PPP1R37O75864 691 aa6.46□□□□□ -1.38
PTPRM-206ENST00000578093 FBXO31Q5XUX0 539 aaPredicted RBP6.46□□□□□ -1.38
PTPRM-206ENST00000578093 UBR1Q8IWV7 1749 aa6.46□□□□□ -1.38
PTPRM-206ENST00000578093 MS4A4AQ96JQ5 239 aa6.46□□□□□ -1.38
PTPRM-206ENST00000578093 UGGT1Q9NYU2 1555 aa6.46□□□□□ -1.38
PTPRM-206ENST00000578093 CFDP1Q9UEE9 299 aaPredicted RBP6.46□□□□□ -1.38
PTPRM-206ENST00000578093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.45□□□□□ -1.38
PTPRM-206ENST00000578093 ARHGEF5Q12774 1597 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 CFAP65Q6ZU64 1925 aaKnown RBP6.45□□□□□ -1.38
PTPRM-206ENST00000578093 RTEL1-TNFRSF6BF6WH68 1400 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 CEP162Q5TB80 1403 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 PIP4K2BP78356 416 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 WDR70Q9NW82 654 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 MED14O60244 1454 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 NCOA2Q15596 1464 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 ABCC3O15438 1527 aa6.45□□□□□ -1.38
PTPRM-206ENST00000578093 DHX29Q7Z478 1369 aaKnown RBP6.44□□□□□ -1.38
PTPRM-206ENST00000578093 NPHP4O75161 1426 aaPredicted RBP6.44□□□□□ -1.38
PTPRM-206ENST00000578093 EIF2AK4Q9P2K8 1649 aaKnown RBP6.44□□□□□ -1.38
PTPRM-206ENST00000578093 TRAF7Q6Q0C0 670 aa6.44□□□□□ -1.38
PTPRM-206ENST00000578093 KDM2AQ9Y2K7 1162 aa6.44□□□□□ -1.38
PTPRM-206ENST00000578093 NLRP1Q9C000 1473 aa6.44□□□□□ -1.38
PTPRM-206ENST00000578093 LRRC7Q96NW7 1537 aa6.44□□□□□ -1.38
PTPRM-206ENST00000578093 MAST1Q9Y2H9 1570 aa6.44□□□□□ -1.38
PTPRM-206ENST00000578093 CROCC2H7BZ55 1655 aa6.42□□□□□ -1.38
PTPRM-206ENST00000578093 SETD1AO15047 1707 aaKnown RBP6.42□□□□□ -1.38
PTPRM-206ENST00000578093 ERVK-7P63135 1459 aa6.42□□□□□ -1.38
PTPRM-206ENST00000578093 MIA2Q96PC5 1412 aa6.42□□□□□ -1.38
PTPRM-206ENST00000578093 PIK3C2BO00750 1634 aa6.41□□□□□ -1.38
PTPRM-206ENST00000578093 KIF3BO15066 747 aa6.41□□□□□ -1.38
PTPRM-206ENST00000578093 PDE4AP27815 886 aa6.41□□□□□ -1.38
PTPRM-206ENST00000578093 PRDM15P57071 1507 aaPredicted RBP6.4□□□□□ -1.38
PTPRM-206ENST00000578093 DPY19L2Q6NUT2 758 aa6.4□□□□□ -1.38
PTPRM-206ENST00000578093 CADPS2Q86UW7 1296 aa6.4□□□□□ -1.38
PTPRM-206ENST00000578093 BOLA1Q9Y3E2 137 aa6.4□□□□□ -1.38
PTPRM-206ENST00000578093 TOM1O60784 492 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 GPR153Q6NV75 609 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 POTEEQ6S8J3 1075 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 MICALL2Q8IY33 904 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 WASHC2CQ9Y4E1 1318 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 SCAF11Q99590 1463 aaKnown RBP6.39□□□□□ -1.39
PTPRM-206ENST00000578093 ARHGAP23Q9P227 1491 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 SLIT1O75093 1534 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 MAP3K1Q13233 1512 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 ROBO1Q9Y6N7 1651 aa6.39□□□□□ -1.39
PTPRM-206ENST00000578093 ANKLE2Q86XL3 938 aa6.38□□□□□ -1.39
PTPRM-206ENST00000578093 LRRC9Q6ZRR7 1453 aa6.38□□□□□ -1.39
PTPRM-206ENST00000578093 MYO5BQ9ULV0 1848 aa6.38□□□□□ -1.39
PTPRM-206ENST00000578093 BCANQ96GW7 911 aa6.37□□□□□ -1.39
PTPRM-206ENST00000578093 ZSWIM6Q9HCJ5 1215 aa6.37□□□□□ -1.39
PTPRM-206ENST00000578093 RGS17Q9UGC6 210 aaPredicted RBP6.37□□□□□ -1.39
PTPRM-206ENST00000578093 NWD1Q149M9 1564 aa6.36□□□□□ -1.39
PTPRM-206ENST00000578093 DUOX2Q9NRD8 1548 aa6.36□□□□□ -1.39
PTPRM-206ENST00000578093 RIMBP2O15034 1052 aa6.36□□□□□ -1.39
PTPRM-206ENST00000578093 THEMISQ8N1K5 641 aaPredicted RBP6.36□□□□□ -1.39
PTPRM-206ENST00000578093 TMC2Q8TDI7 906 aa6.36□□□□□ -1.39
PTPRM-206ENST00000578093 LARP6Q9BRS8 491 aaKnown RBP6.36□□□□□ -1.39
PTPRM-206ENST00000578093 KDM5AP29375 1690 aaKnown RBP6.36□□□□□ -1.39
PTPRM-206ENST00000578093 LTKP29376 864 aa6.35□□□□□ -1.39
PTPRM-206ENST00000578093 ADGRB3O60242 1522 aa6.35□□□□□ -1.39
PTPRM-206ENST00000578093 PHLPP1O60346 1717 aa6.34□□□□□ -1.39
PTPRM-206ENST00000578093 TET3O43151 1660 aa6.34□□□□□ -1.39
PTPRM-206ENST00000578093 GCC2Q8IWJ2 1684 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms