RNA–Protein interactions for RNA: ENST00000578016.1

CYB561-208, Transcript of cytochrome b561, human

TSL 4

Gene CYB561, Length 530 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561-208	ENST00000578016	ADGRB1	O14514	1584 aa		28.11	■■■□□ 2.09
CYB561-208	ENST00000578016	MST1R	Q04912	1400 aa		28.11	■■■□□ 2.09
CYB561-208	ENST00000578016	PRAM1	Q96QH2	718 aa		28.11	■■■□□ 2.09
CYB561-208	ENST00000578016	BRINP3	Q76B58	766 aa		28.08	■■■□□ 2.09
CYB561-208	ENST00000578016	NBPF1	Q3BBV0	1214 aa		28.06	■■■□□ 2.08
CYB561-208	ENST00000578016	TONSL	Q96HA7	1378 aa		28.06	■■■□□ 2.08
CYB561-208	ENST00000578016	DLC1	Q96QB1	1528 aa		28.05	■■■□□ 2.08
CYB561-208	ENST00000578016	PHLPP1	O60346	1717 aa		28.04	■■■□□ 2.08
CYB561-208	ENST00000578016	KIAA1210	Q9ULL0	1709 aa		28.04	■■■□□ 2.08
CYB561-208	ENST00000578016	C1orf167	Q5SNV9	1468 aa		28.04	■■■□□ 2.08
CYB561-208	ENST00000578016	NUTM2F	A1L443	756 aa		28.04	■■■□□ 2.08
CYB561-208	ENST00000578016	CDC42BPG	Q6DT37	1551 aa		28.02	■■■□□ 2.08
CYB561-208	ENST00000578016	ORAI2	Q96SN7	254 aa		28	■■■□□ 2.07
CYB561-208	ENST00000578016	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.98	■■■□□ 2.07
CYB561-208	ENST00000578016	ESCO1	Q5FWF5	840 aa		27.98	■■■□□ 2.07
CYB561-208	ENST00000578016	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.98	■■■□□ 2.07
CYB561-208	ENST00000578016	DDX17	Q92841	729 aa	Known RBP	27.96	■■■□□ 2.07
CYB561-208	ENST00000578016	AHDC1	Q5TGY3	1603 aa	Predicted RBP	27.95	■■■□□ 2.06
CYB561-208	ENST00000578016	NBPF8	Q3BBV2	869 aa		27.94	■■■□□ 2.06
CYB561-208	ENST00000578016	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.93	■■■□□ 2.06
CYB561-208	ENST00000578016	FMN2	Q9NZ56	1722 aa		27.92	■■■□□ 2.06
CYB561-208	ENST00000578016	COL16A1	Q07092	1604 aa	Predicted RBP	27.92	■■■□□ 2.06
CYB561-208	ENST00000578016	ROCK2	O75116	1388 aa	Known RBP	27.91	■■■□□ 2.06
CYB561-208	ENST00000578016	CCER1	Q8TC90	406 aa	Predicted RBP	27.91	■■■□□ 2.06
CYB561-208	ENST00000578016	TRPM1	Q7Z4N2	1603 aa		27.91	■■■□□ 2.06
CYB561-208	ENST00000578016	JCAD	Q9P266	1359 aa		27.89	■■■□□ 2.06
CYB561-208	ENST00000578016	NHSL1	Q5SYE7	1610 aa		27.89	■■■□□ 2.05
CYB561-208	ENST00000578016	MED1	Q15648	1581 aa	Predicted RBP	27.86	■■■□□ 2.05
CYB561-208	ENST00000578016	WASL	O00401	505 aa	Predicted RBP	27.86	■■■□□ 2.05
CYB561-208	ENST00000578016	CLSPN	Q9HAW4	1339 aa		27.86	■■■□□ 2.05
CYB561-208	ENST00000578016	FOXO3	O43524	673 aa		27.85	■■■□□ 2.05
CYB561-208	ENST00000578016	LRRC59	Q96AG4	307 aa	Known RBP	27.85	■■■□□ 2.05
CYB561-208	ENST00000578016	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.85	■■■□□ 2.05
CYB561-208	ENST00000578016	ADGRB2	O60241	1585 aa		27.85	■■■□□ 2.05
CYB561-208	ENST00000578016	RGPD8	O14715	1765 aa	Predicted RBP	27.83	■■■□□ 2.05
CYB561-208	ENST00000578016	PHF8	Q9UPP1	1060 aa		27.83	■■■□□ 2.05
CYB561-208	ENST00000578016	NPHP3	Q7Z494	1330 aa		27.83	■■■□□ 2.05
CYB561-208	ENST00000578016	XPC	Q01831	940 aa	Predicted RBP	27.82	■■■□□ 2.04
CYB561-208	ENST00000578016	EIF3A	Q14152	1382 aa	Known RBP	27.82	■■■□□ 2.04
CYB561-208	ENST00000578016	PHF23	Q9BUL5	403 aa	Predicted RBP	27.81	■■■□□ 2.04
CYB561-208	ENST00000578016	CDK19	Q9BWU1	502 aa		27.8	■■■□□ 2.04
CYB561-208	ENST00000578016	CARD11	Q9BXL7	1154 aa		27.8	■■■□□ 2.04
CYB561-208	ENST00000578016	ANKAR	Q7Z5J8	1434 aa		27.79	■■■□□ 2.04
CYB561-208	ENST00000578016	SOS2	Q07890	1332 aa	Predicted RBP	27.79	■■■□□ 2.04
CYB561-208	ENST00000578016	PMFBP1	Q8TBY8	1022 aa		27.78	■■■□□ 2.04
CYB561-208	ENST00000578016	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.77	■■■□□ 2.04
CYB561-208	ENST00000578016	NUTM2E	B1AL46	878 aa	Predicted RBP	27.77	■■■□□ 2.04
CYB561-208	ENST00000578016	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.77	■■■□□ 2.04
CYB561-208	ENST00000578016	KIF1A	Q12756	1690 aa		27.77	■■■□□ 2.04
CYB561-208	ENST00000578016	SPATA31A6	Q5VVP1	1343 aa		27.76	■■■□□ 2.03
CYB561-208	ENST00000578016	PRR36	Q9H6K5	1346 aa		27.76	■■■□□ 2.03
CYB561-208	ENST00000578016	USP32	Q8NFA0	1604 aa		27.76	■■■□□ 2.03
CYB561-208	ENST00000578016	TULP4	Q9NRJ4	1543 aa		27.76	■■■□□ 2.03
CYB561-208	ENST00000578016	GPRASP1	Q5JY77	1395 aa		27.75	■■■□□ 2.03
CYB561-208	ENST00000578016	SHPRH	Q149N8	1683 aa		27.75	■■■□□ 2.03
CYB561-208	ENST00000578016	KRT28	Q7Z3Y7	464 aa		27.75	■■■□□ 2.03
CYB561-208	ENST00000578016	NUDT16	Q96DE0	195 aa	Known RBP	27.75	■■■□□ 2.03
CYB561-208	ENST00000578016	RALGAPB	Q86X10	1494 aa		27.75	■■■□□ 2.03
CYB561-208	ENST00000578016	QRICH2	Q9H0J4	1663 aa		27.75	■■■□□ 2.03
CYB561-208	ENST00000578016	TIMELESS	Q9UNS1	1208 aa		27.74	■■■□□ 2.03
CYB561-208	ENST00000578016	SRPK2	P78362	688 aa	Known RBP	27.73	■■■□□ 2.03
CYB561-208	ENST00000578016	PSME1	Q06323	249 aa		27.73	■■■□□ 2.03
CYB561-208	ENST00000578016	MEX3C	Q5U5Q3	659 aa	Known RBP	27.73	■■■□□ 2.03
CYB561-208	ENST00000578016	PNPLA6	Q8IY17	1366 aa		27.73	■■■□□ 2.03
CYB561-208	ENST00000578016	PXDN	Q92626	1479 aa		27.71	■■■□□ 2.03
CYB561-208	ENST00000578016	NGDN	Q8NEJ9	315 aa	Known RBP	27.69	■■■□□ 2.02
CYB561-208	ENST00000578016	CABP2	Q9NPB3	220 aa		27.68	■■■□□ 2.02
CYB561-208	ENST00000578016	EVC2	Q86UK5	1308 aa		27.67	■■■□□ 2.02
CYB561-208	ENST00000578016	ATP7B	P35670	1465 aa		27.66	■■■□□ 2.02
CYB561-208	ENST00000578016	LRP6	O75581	1613 aa		27.66	■■■□□ 2.02
CYB561-208	ENST00000578016	LMOD2	Q6P5Q4	547 aa		27.65	■■■□□ 2.02
CYB561-208	ENST00000578016	CCDC61	Q9Y6R9	512 aa		27.65	■■■□□ 2.02
CYB561-208	ENST00000578016	ITSN1	Q15811	1721 aa		27.64	■■■□□ 2.02
CYB561-208	ENST00000578016	SPATA31A3	Q5VYP0	1347 aa		27.64	■■■□□ 2.01
CYB561-208	ENST00000578016	PLEKHG5	O94827	1062 aa		27.61	■■■□□ 2.01
CYB561-208	ENST00000578016	ADAMTS2	O95450	1211 aa		27.6	■■■□□ 2.01
CYB561-208	ENST00000578016	SBNO1	A3KN83	1393 aa		27.59	■■■□□ 2.01
CYB561-208	ENST00000578016	PAK3	O75914	559 aa	Predicted RBP	27.58	■■■□□ 2.01
CYB561-208	ENST00000578016	RGS17	Q9UGC6	210 aa	Predicted RBP	27.58	■■■□□ 2.01
CYB561-208	ENST00000578016	ACE	P12821	1306 aa		27.58	■■■□□ 2.01
CYB561-208	ENST00000578016	TNS3	Q68CZ2	1445 aa		27.58	■■■□□ 2
CYB561-208	ENST00000578016	PLEKHG3	A1L390	1219 aa		27.57	■■■□□ 2
CYB561-208	ENST00000578016	PPIP5K1	Q6PFW1	1433 aa		27.57	■■■□□ 2
CYB561-208	ENST00000578016	C8orf37	Q96NL8	207 aa		27.56	■■■□□ 2
CYB561-208	ENST00000578016	TOPAZ1	Q8N9V7	1692 aa		27.56	■■■□□ 2
CYB561-208	ENST00000578016	ST20-MTHFS	A0A0A6YYL1	179 aa		27.55	■■■□□ 2
CYB561-208	ENST00000578016	CABP1	Q9NZU7	370 aa		27.55	■■■□□ 2
CYB561-208	ENST00000578016	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.55	■■■□□ 2
CYB561-208	ENST00000578016	HAP1	P54257	671 aa	Predicted RBP	27.54	■■■□□ 2
CYB561-208	ENST00000578016	SBNO2	Q9Y2G9	1366 aa		27.53	■■■□□ 2
CYB561-208	ENST00000578016	ARHGEF10	O15013	1369 aa		27.52	■■■□□ 2
CYB561-208	ENST00000578016	NGLY1	Q96IV0	654 aa		27.52	■■■□□ 2
CYB561-208	ENST00000578016	POLR3A	O14802	1390 aa	Predicted RBP	27.51	■■□□□ 1.99
CYB561-208	ENST00000578016	CABLES1	Q8TDN4	633 aa		27.51	■■□□□ 1.99
CYB561-208	ENST00000578016	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.5	■■□□□ 1.99
CYB561-208	ENST00000578016	USP47	Q96K76	1375 aa		27.5	■■□□□ 1.99
CYB561-208	ENST00000578016	AFF2	P51816	1311 aa		27.5	■■□□□ 1.99
CYB561-208	ENST00000578016	POTEA	Q6S8J7	498 aa		27.5	■■□□□ 1.99
CYB561-208	ENST00000578016	ZNF772	Q68DY9	489 aa	Predicted RBP	27.48	■■□□□ 1.99
CYB561-208	ENST00000578016	ATAD2	Q6PL18	1390 aa		27.48	■■□□□ 1.99

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