RNA–Protein interactions for RNA: ENST00000578006.5

RHBDL3-205, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,341 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-205ENST00000578006 KIAA1210Q9ULL0 1709 aa29.55■■■□□ 2.32
RHBDL3-205ENST00000578006 WAPLQ7Z5K2 1190 aa29.55■■■□□ 2.32
RHBDL3-205ENST00000578006 JCADQ9P266 1359 aa29.54■■■□□ 2.32
RHBDL3-205ENST00000578006 PLEKHH1Q9ULM0 1364 aa29.53■■■□□ 2.32
RHBDL3-205ENST00000578006 SHPRHQ149N8 1683 aa29.51■■■□□ 2.31
RHBDL3-205ENST00000578006 FMN2Q9NZ56 1722 aa29.5■■■□□ 2.31
RHBDL3-205ENST00000578006 ADGRB2O60241 1585 aa29.45■■■□□ 2.3
RHBDL3-205ENST00000578006 ARHGEF28Q8N1W1 1705 aaKnown RBP29.45■■■□□ 2.3
RHBDL3-205ENST00000578006 PRAM1Q96QH2 718 aa29.45■■■□□ 2.3
RHBDL3-205ENST00000578006 PHF23Q9BUL5 403 aaPredicted RBP29.44■■■□□ 2.3
RHBDL3-205ENST00000578006 POGKQ9P215 609 aa29.43■■■□□ 2.3
RHBDL3-205ENST00000578006 ORAI2Q96SN7 254 aa29.42■■■□□ 2.3
RHBDL3-205ENST00000578006 SIN3AQ96ST3 1273 aa29.42■■■□□ 2.3
RHBDL3-205ENST00000578006 TRAK1Q9UPV9 953 aa29.42■■■□□ 2.3
RHBDL3-205ENST00000578006 SPATA31A6Q5VVP1 1343 aa29.41■■■□□ 2.3
RHBDL3-205ENST00000578006 KIF1AQ12756 1690 aa29.39■■■□□ 2.3
RHBDL3-205ENST00000578006 LRRC59Q96AG4 307 aaKnown RBP29.39■■■□□ 2.3
RHBDL3-205ENST00000578006 L3MBTL2Q969R5 705 aa29.38■■■□□ 2.29
RHBDL3-205ENST00000578006 SAFB2Q14151 953 aaKnown RBP eCLIP29.37■■■□□ 2.29
RHBDL3-205ENST00000578006 ESCO1Q5FWF5 840 aa29.37■■■□□ 2.29
RHBDL3-205ENST00000578006 RGPD8O14715 1765 aaPredicted RBP29.36■■■□□ 2.29
RHBDL3-205ENST00000578006 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
RHBDL3-205ENST00000578006 DDX17Q92841 729 aaKnown RBP29.36■■■□□ 2.29
RHBDL3-205ENST00000578006 ILDR2Q71H61 639 aa29.35■■■□□ 2.29
RHBDL3-205ENST00000578006 SOS2Q07890 1332 aaPredicted RBP29.34■■■□□ 2.29
RHBDL3-205ENST00000578006 NPHP3Q7Z494 1330 aa29.34■■■□□ 2.29
RHBDL3-205ENST00000578006 NUTM2FA1L443 756 aa29.33■■■□□ 2.29
RHBDL3-205ENST00000578006 TRPM1Q7Z4N2 1603 aa29.32■■■□□ 2.28
RHBDL3-205ENST00000578006 ANKARQ7Z5J8 1434 aa29.32■■■□□ 2.28
RHBDL3-205ENST00000578006 EIF3AQ14152 1382 aaKnown RBP29.31■■■□□ 2.28
RHBDL3-205ENST00000578006 LRP6O75581 1613 aa29.31■■■□□ 2.28
RHBDL3-205ENST00000578006 USP32Q8NFA0 1604 aa29.29■■■□□ 2.28
RHBDL3-205ENST00000578006 PNPLA6Q8IY17 1366 aa29.29■■■□□ 2.28
RHBDL3-205ENST00000578006 PXDNQ92626 1479 aa29.29■■■□□ 2.28
RHBDL3-205ENST00000578006 NBPF1Q3BBV0 1214 aa29.27■■■□□ 2.28
RHBDL3-205ENST00000578006 MINK1Q8N4C8 1332 aaPredicted RBP29.27■■■□□ 2.28
RHBDL3-205ENST00000578006 TULP4Q9NRJ4 1543 aa29.27■■■□□ 2.28
RHBDL3-205ENST00000578006 COL22A1Q8NFW1 1626 aaPredicted RBP29.25■■■□□ 2.27
RHBDL3-205ENST00000578006 FOXO3O43524 673 aa29.24■■■□□ 2.27
RHBDL3-205ENST00000578006 HIRIP3Q9BW71 556 aaPredicted RBP29.24■■■□□ 2.27
RHBDL3-205ENST00000578006 ITSN1Q15811 1721 aa29.22■■■□□ 2.27
RHBDL3-205ENST00000578006 WASLO00401 505 aaPredicted RBP29.22■■■□□ 2.27
RHBDL3-205ENST00000578006 MEX3CQ5U5Q3 659 aaKnown RBP29.22■■■□□ 2.27
RHBDL3-205ENST00000578006 RGS17Q9UGC6 210 aaPredicted RBP29.22■■■□□ 2.27
RHBDL3-205ENST00000578006 PHF8Q9UPP1 1060 aa29.22■■■□□ 2.27
RHBDL3-205ENST00000578006 TONSLQ96HA7 1378 aa29.22■■■□□ 2.27
RHBDL3-205ENST00000578006 NUTM2BA6NNL0 878 aaPredicted RBP29.19■■■□□ 2.26
RHBDL3-205ENST00000578006 NUTM2EB1AL46 878 aaPredicted RBP29.19■■■□□ 2.26
RHBDL3-205ENST00000578006 NUTM2AQ8IVF1 878 aaPredicted RBP29.19■■■□□ 2.26
RHBDL3-205ENST00000578006 QRICH2Q9H0J4 1663 aa29.18■■■□□ 2.26
RHBDL3-205ENST00000578006 ROCK2O75116 1388 aaKnown RBP29.17■■■□□ 2.26
RHBDL3-205ENST00000578006 XPCQ01831 940 aaPredicted RBP29.16■■■□□ 2.26
RHBDL3-205ENST00000578006 CENPJQ9HC77 1338 aaPredicted RBP29.15■■■□□ 2.26
RHBDL3-205ENST00000578006 ATP7BP35670 1465 aa29.15■■■□□ 2.26
RHBDL3-205ENST00000578006 PRR36Q9H6K5 1346 aa29.14■■■□□ 2.26
RHBDL3-205ENST00000578006 KRT28Q7Z3Y7 464 aa29.13■■■□□ 2.25
RHBDL3-205ENST00000578006 SOCS7O14512 581 aa29.12■■■□□ 2.25
RHBDL3-205ENST00000578006 PSME1Q06323 249 aa29.12■■■□□ 2.25
RHBDL3-205ENST00000578006 TOPAZ1Q8N9V7 1692 aa29.12■■■□□ 2.25
RHBDL3-205ENST00000578006 GPRASP1Q5JY77 1395 aa29.12■■■□□ 2.25
RHBDL3-205ENST00000578006 SPATA31A3Q5VYP0 1347 aa29.11■■■□□ 2.25
RHBDL3-205ENST00000578006 TNS3Q68CZ2 1445 aa29.11■■■□□ 2.25
RHBDL3-205ENST00000578006 NBPF8Q3BBV2 869 aa29.1■■■□□ 2.25
RHBDL3-205ENST00000578006 ZNF772Q68DY9 489 aaPredicted RBP29.1■■■□□ 2.25
RHBDL3-205ENST00000578006 PMFBP1Q8TBY8 1022 aa29.1■■■□□ 2.25
RHBDL3-205ENST00000578006 SBNO1A3KN83 1393 aa29.1■■■□□ 2.25
RHBDL3-205ENST00000578006 MARF1Q9Y4F3 1742 aaKnown RBP29.1■■■□□ 2.25
RHBDL3-205ENST00000578006 POTEAQ6S8J7 498 aa29.09■■■□□ 2.25
RHBDL3-205ENST00000578006 CDK19Q9BWU1 502 aa29.09■■■□□ 2.25
RHBDL3-205ENST00000578006 PCGF6Q9BYE7 350 aa29.09■■■□□ 2.25
RHBDL3-205ENST00000578006 RALGAPBQ86X10 1494 aa29.09■■■□□ 2.25
RHBDL3-205ENST00000578006 TRPM3Q9HCF6 1732 aaPredicted RBP29.08■■■□□ 2.25
RHBDL3-205ENST00000578006 NUDT16Q96DE0 195 aaKnown RBP29.07■■■□□ 2.24
RHBDL3-205ENST00000578006 C8orf37Q96NL8 207 aa29.04■■■□□ 2.24
RHBDL3-205ENST00000578006 CLSPNQ9HAW4 1339 aa29.04■■■□□ 2.24
RHBDL3-205ENST00000578006 ARHGEF10O15013 1369 aa29.03■■■□□ 2.24
RHBDL3-205ENST00000578006 ADAMTS2O95450 1211 aa29.03■■■□□ 2.24
RHBDL3-205ENST00000578006 AFF2P51816 1311 aa29.03■■■□□ 2.24
RHBDL3-205ENST00000578006 ALS2Q96Q42 1657 aa29.02■■■□□ 2.24
RHBDL3-205ENST00000578006 NGDNQ8NEJ9 315 aaKnown RBP29.01■■■□□ 2.23
RHBDL3-205ENST00000578006 CCDC61Q9Y6R9 512 aa29.01■■■□□ 2.23
RHBDL3-205ENST00000578006 ABCA3Q99758 1704 aa29■■■□□ 2.23
RHBDL3-205ENST00000578006 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
RHBDL3-205ENST00000578006 CARD11Q9BXL7 1154 aa28.98■■■□□ 2.23
RHBDL3-205ENST00000578006 NGLY1Q96IV0 654 aa28.97■■■□□ 2.23
RHBDL3-205ENST00000578006 POLR3AO14802 1390 aaPredicted RBP28.97■■■□□ 2.23
RHBDL3-205ENST00000578006 EVC2Q86UK5 1308 aa28.96■■■□□ 2.23
RHBDL3-205ENST00000578006 SBNO2Q9Y2G9 1366 aa28.95■■■□□ 2.22
RHBDL3-205ENST00000578006 PLEKHG3A1L390 1219 aa28.94■■■□□ 2.22
RHBDL3-205ENST00000578006 LMOD2Q6P5Q4 547 aa28.94■■■□□ 2.22
RHBDL3-205ENST00000578006 PPIP5K1Q6PFW1 1433 aa28.94■■■□□ 2.22
RHBDL3-205ENST00000578006 CABP2Q9NPB3 220 aa28.93■■■□□ 2.22
RHBDL3-205ENST00000578006 FNBP4Q8N3X1 1017 aaPredicted RBP28.92■■■□□ 2.22
RHBDL3-205ENST00000578006 ACEP12821 1306 aa28.91■■■□□ 2.22
RHBDL3-205ENST00000578006 HAP1P54257 671 aaPredicted RBP28.91■■■□□ 2.22
RHBDL3-205ENST00000578006 TIMELESSQ9UNS1 1208 aa28.91■■■□□ 2.22
RHBDL3-205ENST00000578006 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.9■■■□□ 2.22
RHBDL3-205ENST00000578006 CRYBG1Q9Y4K1 1723 aa28.9■■■□□ 2.22
RHBDL3-205ENST00000578006 CDK12Q9NYV4 1490 aaPredicted RBP28.89■■■□□ 2.22
RHBDL3-205ENST00000578006 RXRBP28702 533 aa28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms