RNA–Protein interactions for RNA: ENST00000577857.5

ACADVL-208, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 4

Gene ACADVL, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-208	ENST00000577857	ADGRB1	O14514	1584 aa		33.05	■■■□□ 2.88
ACADVL-208	ENST00000577857	PHF23	Q9BUL5	403 aa	Predicted RBP	33.05	■■■□□ 2.88
ACADVL-208	ENST00000577857	ILDR2	Q71H61	639 aa		33.03	■■■□□ 2.88
ACADVL-208	ENST00000577857	DLC1	Q96QB1	1528 aa		33	■■■□□ 2.87
ACADVL-208	ENST00000577857	NHSL1	Q5SYE7	1610 aa		32.99	■■■□□ 2.87
ACADVL-208	ENST00000577857	PRAM1	Q96QH2	718 aa		32.99	■■■□□ 2.87
ACADVL-208	ENST00000577857	ORAI2	Q96SN7	254 aa		32.98	■■■□□ 2.87
ACADVL-208	ENST00000577857	DDX17	Q92841	729 aa	Known RBP	32.96	■■■□□ 2.87
ACADVL-208	ENST00000577857	POGK	Q9P215	609 aa		32.95	■■■□□ 2.87
ACADVL-208	ENST00000577857	TRAK1	Q9UPV9	953 aa		32.95	■■■□□ 2.87
ACADVL-208	ENST00000577857	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.94	■■■□□ 2.86
ACADVL-208	ENST00000577857	SIN3A	Q96ST3	1273 aa		32.93	■■■□□ 2.86
ACADVL-208	ENST00000577857	SPATA31A6	Q5VVP1	1343 aa		32.93	■■■□□ 2.86
ACADVL-208	ENST00000577857	ESCO1	Q5FWF5	840 aa		32.92	■■■□□ 2.86
ACADVL-208	ENST00000577857	LRRC59	Q96AG4	307 aa	Known RBP	32.91	■■■□□ 2.86
ACADVL-208	ENST00000577857	NUTM2F	A1L443	756 aa		32.9	■■■□□ 2.86
ACADVL-208	ENST00000577857	SHPRH	Q149N8	1683 aa		32.9	■■■□□ 2.86
ACADVL-208	ENST00000577857	NEUROD1	Q13562	356 aa		32.87	■■■□□ 2.85
ACADVL-208	ENST00000577857	L3MBTL2	Q969R5	705 aa		32.87	■■■□□ 2.85
ACADVL-208	ENST00000577857	FMN2	Q9NZ56	1722 aa		32.87	■■■□□ 2.85
ACADVL-208	ENST00000577857	SOS2	Q07890	1332 aa	Predicted RBP	32.86	■■■□□ 2.85
ACADVL-208	ENST00000577857	NPHP3	Q7Z494	1330 aa		32.84	■■■□□ 2.85
ACADVL-208	ENST00000577857	KIAA1210	Q9ULL0	1709 aa		32.84	■■■□□ 2.85
ACADVL-208	ENST00000577857	LRP6	O75581	1613 aa		32.84	■■■□□ 2.85
ACADVL-208	ENST00000577857	RGS17	Q9UGC6	210 aa	Predicted RBP	32.82	■■■□□ 2.84
ACADVL-208	ENST00000577857	ADGRB2	O60241	1585 aa		32.82	■■■□□ 2.84
ACADVL-208	ENST00000577857	PNPLA6	Q8IY17	1366 aa		32.81	■■■□□ 2.84
ACADVL-208	ENST00000577857	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.79	■■■□□ 2.84
ACADVL-208	ENST00000577857	FOXO3	O43524	673 aa		32.79	■■■□□ 2.84
ACADVL-208	ENST00000577857	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.79	■■■□□ 2.84
ACADVL-208	ENST00000577857	NBPF1	Q3BBV0	1214 aa		32.78	■■■□□ 2.84
ACADVL-208	ENST00000577857	MEX3C	Q5U5Q3	659 aa	Known RBP	32.78	■■■□□ 2.84
ACADVL-208	ENST00000577857	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.77	■■■□□ 2.84
ACADVL-208	ENST00000577857	NUTM2E	B1AL46	878 aa	Predicted RBP	32.77	■■■□□ 2.84
ACADVL-208	ENST00000577857	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.77	■■■□□ 2.84
ACADVL-208	ENST00000577857	PXDN	Q92626	1479 aa		32.76	■■■□□ 2.84
ACADVL-208	ENST00000577857	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.76	■■■□□ 2.83
ACADVL-208	ENST00000577857	ANKAR	Q7Z5J8	1434 aa		32.76	■■■□□ 2.83
ACADVL-208	ENST00000577857	KIF1A	Q12756	1690 aa		32.74	■■■□□ 2.83
ACADVL-208	ENST00000577857	EIF3A	Q14152	1382 aa	Known RBP	32.73	■■■□□ 2.83
ACADVL-208	ENST00000577857	XPC	Q01831	940 aa	Predicted RBP	32.73	■■■□□ 2.83
ACADVL-208	ENST00000577857	PHF8	Q9UPP1	1060 aa		32.73	■■■□□ 2.83
ACADVL-208	ENST00000577857	SOCS7	O14512	581 aa		32.72	■■■□□ 2.83
ACADVL-208	ENST00000577857	WASL	O00401	505 aa	Predicted RBP	32.7	■■■□□ 2.83
ACADVL-208	ENST00000577857	TULP4	Q9NRJ4	1543 aa		32.67	■■■□□ 2.82
ACADVL-208	ENST00000577857	USP32	Q8NFA0	1604 aa		32.67	■■■□□ 2.82
ACADVL-208	ENST00000577857	POTEA	Q6S8J7	498 aa		32.66	■■■□□ 2.82
ACADVL-208	ENST00000577857	RGPD8	O14715	1765 aa	Predicted RBP	32.65	■■■□□ 2.82
ACADVL-208	ENST00000577857	PRR36	Q9H6K5	1346 aa		32.64	■■■□□ 2.82
ACADVL-208	ENST00000577857	TONSL	Q96HA7	1378 aa		32.63	■■■□□ 2.81
ACADVL-208	ENST00000577857	KRT28	Q7Z3Y7	464 aa		32.63	■■■□□ 2.81
ACADVL-208	ENST00000577857	TRPM1	Q7Z4N2	1603 aa		32.62	■■■□□ 2.81
ACADVL-208	ENST00000577857	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.62	■■■□□ 2.81
ACADVL-208	ENST00000577857	ZNF772	Q68DY9	489 aa	Predicted RBP	32.61	■■■□□ 2.81
ACADVL-208	ENST00000577857	PMFBP1	Q8TBY8	1022 aa		32.61	■■■□□ 2.81
ACADVL-208	ENST00000577857	ROCK2	O75116	1388 aa	Known RBP	32.6	■■■□□ 2.81
ACADVL-208	ENST00000577857	SPATA31A3	Q5VYP0	1347 aa		32.6	■■■□□ 2.81
ACADVL-208	ENST00000577857	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.6	■■■□□ 2.81
ACADVL-208	ENST00000577857	PSME1	Q06323	249 aa		32.6	■■■□□ 2.81
ACADVL-208	ENST00000577857	ADAMTS2	O95450	1211 aa		32.59	■■■□□ 2.81
ACADVL-208	ENST00000577857	C8orf37	Q96NL8	207 aa		32.58	■■■□□ 2.81
ACADVL-208	ENST00000577857	CDK19	Q9BWU1	502 aa		32.57	■■■□□ 2.8
ACADVL-208	ENST00000577857	ATP7B	P35670	1465 aa		32.56	■■■□□ 2.8
ACADVL-208	ENST00000577857	NBPF8	Q3BBV2	869 aa		32.56	■■■□□ 2.8
ACADVL-208	ENST00000577857	AFF2	P51816	1311 aa		32.55	■■■□□ 2.8
ACADVL-208	ENST00000577857	TNS3	Q68CZ2	1445 aa		32.55	■■■□□ 2.8
ACADVL-208	ENST00000577857	NUDT16	Q96DE0	195 aa	Known RBP	32.55	■■■□□ 2.8
ACADVL-208	ENST00000577857	SBNO1	A3KN83	1393 aa		32.55	■■■□□ 2.8
ACADVL-208	ENST00000577857	GPRASP1	Q5JY77	1395 aa		32.51	■■■□□ 2.79
ACADVL-208	ENST00000577857	PCGF6	Q9BYE7	350 aa		32.51	■■■□□ 2.79
ACADVL-208	ENST00000577857	NGDN	Q8NEJ9	315 aa	Known RBP	32.5	■■■□□ 2.79
ACADVL-208	ENST00000577857	NGLY1	Q96IV0	654 aa		32.5	■■■□□ 2.79
ACADVL-208	ENST00000577857	ARHGEF10	O15013	1369 aa		32.48	■■■□□ 2.79
ACADVL-208	ENST00000577857	QRICH2	Q9H0J4	1663 aa		32.47	■■■□□ 2.79
ACADVL-208	ENST00000577857	ITSN1	Q15811	1721 aa		32.47	■■■□□ 2.79
ACADVL-208	ENST00000577857	CCDC61	Q9Y6R9	512 aa		32.47	■■■□□ 2.79
ACADVL-208	ENST00000577857	SRPK2	P78362	688 aa	Known RBP	32.46	■■■□□ 2.79
ACADVL-208	ENST00000577857	LMOD2	Q6P5Q4	547 aa		32.46	■■■□□ 2.79
ACADVL-208	ENST00000577857	RALGAPB	Q86X10	1494 aa		32.45	■■■□□ 2.79
ACADVL-208	ENST00000577857	CARD11	Q9BXL7	1154 aa		32.42	■■■□□ 2.78
ACADVL-208	ENST00000577857	TOPAZ1	Q8N9V7	1692 aa		32.41	■■■□□ 2.78
ACADVL-208	ENST00000577857	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.41	■■■□□ 2.78
ACADVL-208	ENST00000577857	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.41	■■■□□ 2.78
ACADVL-208	ENST00000577857	RXRB	P28702	533 aa		32.4	■■■□□ 2.78
ACADVL-208	ENST00000577857	CABP2	Q9NPB3	220 aa		32.4	■■■□□ 2.78
ACADVL-208	ENST00000577857	PLEKHG3	A1L390	1219 aa		32.39	■■■□□ 2.78
ACADVL-208	ENST00000577857	HAP1	P54257	671 aa	Predicted RBP	32.39	■■■□□ 2.78
ACADVL-208	ENST00000577857	USP21	Q9UK80	565 aa		32.39	■■■□□ 2.78
ACADVL-208	ENST00000577857	POLR3A	O14802	1390 aa	Predicted RBP	32.39	■■■□□ 2.78
ACADVL-208	ENST00000577857	EVC2	Q86UK5	1308 aa		32.38	■■■□□ 2.77
ACADVL-208	ENST00000577857	CABLES1	Q8TDN4	633 aa		32.38	■■■□□ 2.77
ACADVL-208	ENST00000577857	ACE	P12821	1306 aa		32.37	■■■□□ 2.77
ACADVL-208	ENST00000577857	PLEKHG5	O94827	1062 aa		32.37	■■■□□ 2.77
ACADVL-208	ENST00000577857	QTRT2	Q9H974	415 aa	Known RBP	32.37	■■■□□ 2.77
ACADVL-208	ENST00000577857	PAK3	O75914	559 aa	Predicted RBP	32.36	■■■□□ 2.77
ACADVL-208	ENST00000577857	PPIP5K1	Q6PFW1	1433 aa		32.35	■■■□□ 2.77
ACADVL-208	ENST00000577857	CLSPN	Q9HAW4	1339 aa		32.35	■■■□□ 2.77
ACADVL-208	ENST00000577857	MARF1	Q9Y4F3	1742 aa	Known RBP	32.34	■■■□□ 2.77
ACADVL-208	ENST00000577857	ALS2	Q96Q42	1657 aa		32.34	■■■□□ 2.77
ACADVL-208	ENST00000577857	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.31	■■■□□ 2.76

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