RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 CCDC192P0DO97 292 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 IBSPP21815 317 aaPredicted RBP5.31□□□□□ -1.56
CDH8-205ENST00000577730 ZKSCAN2Q63HK3 967 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 RTF1Q92541 710 aaKnown RBP5.31□□□□□ -1.56
CDH8-205ENST00000577730 GBP3Q9H0R5 595 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 RSPH14Q9UHP6 348 aa5.31□□□□□ -1.56
CDH8-205ENST00000577730 K7ELQ4 463 aaPredicted RBP5.3□□□□□ -1.56
CDH8-205ENST00000577730 TSR1Q2NL82 804 aaKnown RBP5.3□□□□□ -1.56
CDH8-205ENST00000577730 C10orf67Q8IYJ2 551 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 NAT10Q9H0A0 1025 aaKnown RBP5.3□□□□□ -1.56
CDH8-205ENST00000577730 STK31Q9BXU1 1019 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 TAOK2Q9UL54 1235 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 MICALCLQ6ZW33 695 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 CNPY4Q8N129 248 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 CDC45O75419 566 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 IPO7O95373 1038 aaKnown RBP5.3□□□□□ -1.56
CDH8-205ENST00000577730 NOLC1Q14978 699 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDH8-205ENST00000577730 SF3A1Q15459 793 aaKnown RBP5.3□□□□□ -1.56
CDH8-205ENST00000577730 CERS3Q8IU89 383 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 DRC1Q96MC2 740 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 PTPN14Q15678 1187 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 PAXBP1Q9Y5B6 917 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 TEX2Q8IWB9 1127 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 SYCE3A1L190 88 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 GBP6Q6ZN66 633 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 DCAF11Q8TEB1 546 aa5.3□□□□□ -1.56
CDH8-205ENST00000577730 ARID4AP29374 1257 aaPredicted RBP5.29□□□□□ -1.56
CDH8-205ENST00000577730 GBP2P32456 591 aaPredicted RBP5.29□□□□□ -1.56
CDH8-205ENST00000577730 ANKRD45Q5TZF3 282 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 LRCH2Q5VUJ6 765 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 ZNF397Q8NF99 534 aaPredicted RBP5.29□□□□□ -1.56
CDH8-205ENST00000577730 KIF18AQ8NI77 898 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.29□□□□□ -1.56
CDH8-205ENST00000577730 CCDC73Q6ZRK6 1079 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 DDX19BQ9UMR2 479 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 H3BQV1 296 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 KLHL40Q2TBA0 621 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 IFFO2Q5TF58 517 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 MAP2K2P36507 400 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 UVSSAQ2YD98 709 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 INTS3Q68E01 1043 aaKnown RBP5.29□□□□□ -1.56
CDH8-205ENST00000577730 LRRCC1Q9C099 1032 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 FHAD1B1AJZ9 1412 aa5.29□□□□□ -1.56
CDH8-205ENST00000577730 NINLQ9Y2I6 1382 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 TNPO1Q92973 898 aaKnown RBP5.28□□□□□ -1.56
CDH8-205ENST00000577730 SMC3Q9UQE7 1217 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 CHMP3Q9Y3E7 222 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 EFCC1Q9HA90 598 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 NOL7Q9UMY1 257 aaKnown RBP5.28□□□□□ -1.56
CDH8-205ENST00000577730 SMC2O95347 1197 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 SUDS3Q9H7L9 328 aaPredicted RBP5.28□□□□□ -1.56
CDH8-205ENST00000577730 PDZRN3Q9UPQ7 1066 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 A0A1B0GUA9 196 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 TSPY4P0CV99 314 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 TSPY10P0CW01 314 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 ATP6V1AP38606 617 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 MICALL1Q8N3F8 863 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 NGEFQ8N5V2 710 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 CAGE1Q8TC20 777 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 LRRFIP2Q9Y608 721 aaKnown RBP5.28□□□□□ -1.56
CDH8-205ENST00000577730 CHMP4CQ96CF2 233 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 TBC1D2Q9BYX2 928 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 VPS37CA5D8V6 355 aaPredicted RBP5.28□□□□□ -1.56
CDH8-205ENST00000577730 STAC3Q96MF2 364 aa5.28□□□□□ -1.56
CDH8-205ENST00000577730 CLSTN1O94985 981 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.27□□□□□ -1.57
CDH8-205ENST00000577730 NEMFO60524 1076 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 CHGAP10645 457 aaKnown RBP5.27□□□□□ -1.57
CDH8-205ENST00000577730 MYRIPQ8NFW9 859 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 PSMD1Q99460 953 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 POTEB2H3BUK9 544 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 MCM2P49736 904 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 RGL3Q3MIN7 710 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 MORC1Q86VD1 984 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 C16orf45Q96MC5 204 aaPredicted RBP5.27□□□□□ -1.57
CDH8-205ENST00000577730 NEXNQ0ZGT2 675 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 CCDC146Q8IYE0 955 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 AP1ARQ63HQ0 302 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 FMNL3Q8IVF7 1028 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 TMX1Q9H3N1 280 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 KIF7Q2M1P5 1343 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 CCDC7Q96M83 1385 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 KANK4Q5T7N3 995 aaPredicted RBP5.27□□□□□ -1.57
CDH8-205ENST00000577730 L3MBTL2Q969R5 705 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 USP25Q9UHP3 1055 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 RPAINQ86UA6 219 aa5.27□□□□□ -1.57
CDH8-205ENST00000577730 DZIP1LQ8IYY4 767 aaKnown RBP5.27□□□□□ -1.57
CDH8-205ENST00000577730 SMARCC1Q92922 1105 aaPredicted RBP5.26□□□□□ -1.57
CDH8-205ENST00000577730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDH8-205ENST00000577730 V9GYY5 206 aaPredicted RBP5.26□□□□□ -1.57
CDH8-205ENST00000577730 PDILTQ8N807 584 aa5.26□□□□□ -1.57
CDH8-205ENST00000577730 RNF187Q5TA31 235 aaPredicted RBP5.26□□□□□ -1.57
CDH8-205ENST00000577730 KRBA2Q6ZNG9 492 aa5.26□□□□□ -1.57
CDH8-205ENST00000577730 BRMS1Q9HCU9 246 aa5.26□□□□□ -1.57
CDH8-205ENST00000577730 WDR33Q9C0J8 1336 aaKnown RBP5.26□□□□□ -1.57
CDH8-205ENST00000577730 PPM1EQ8WY54 764 aa5.26□□□□□ -1.57
CDH8-205ENST00000577730 EZRP15311 586 aaKnown RBP5.25□□□□□ -1.57
CDH8-205ENST00000577730 ENOX2Q16206 610 aaKnown RBP5.25□□□□□ -1.57
CDH8-205ENST00000577730 CEP135Q66GS9 1140 aa5.25□□□□□ -1.57
CDH8-205ENST00000577730 RBM33Q96EV2 1170 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms