RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 MRE11P49959 708 aa13.36□□□□□ -0.27
RNF43-203ENST00000577716 THOC2Q8NI27 1593 aaKnown RBP13.36□□□□□ -0.27
RNF43-203ENST00000577716 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
RNF43-203ENST00000577716 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
RNF43-203ENST00000577716 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
RNF43-203ENST00000577716 SLFN5Q08AF3 891 aa13.36□□□□□ -0.27
RNF43-203ENST00000577716 NPHP1O15259 732 aa13.36□□□□□ -0.27
RNF43-203ENST00000577716 CDC45O75419 566 aa13.36□□□□□ -0.27
RNF43-203ENST00000577716 PRKAR2BP31323 418 aa13.36□□□□□ -0.27
RNF43-203ENST00000577716 TEFQ10587 303 aa13.36□□□□□ -0.27
RNF43-203ENST00000577716 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
RNF43-203ENST00000577716 MCTP1Q6DN14 999 aa13.35□□□□□ -0.27
RNF43-203ENST00000577716 RPRD2Q5VT52 1461 aaKnown RBP13.34□□□□□ -0.27
RNF43-203ENST00000577716 SCAPERQ9BY12 1400 aa13.34□□□□□ -0.27
RNF43-203ENST00000577716 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
RNF43-203ENST00000577716 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
RNF43-203ENST00000577716 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
RNF43-203ENST00000577716 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
RNF43-203ENST00000577716 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
RNF43-203ENST00000577716 KIF3AQ9Y496 699 aa13.32□□□□□ -0.28
RNF43-203ENST00000577716 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
RNF43-203ENST00000577716 WWC1Q8IX03 1113 aa13.32□□□□□ -0.28
RNF43-203ENST00000577716 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
RNF43-203ENST00000577716 C9orf78Q9NZ63 289 aaPredicted RBP13.32□□□□□ -0.28
RNF43-203ENST00000577716 MVPQ14764 893 aaKnown RBP13.32□□□□□ -0.28
RNF43-203ENST00000577716 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
RNF43-203ENST00000577716 RUFY2Q8WXA3 655 aa13.32□□□□□ -0.28
RNF43-203ENST00000577716 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
RNF43-203ENST00000577716 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
RNF43-203ENST00000577716 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
RNF43-203ENST00000577716 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
RNF43-203ENST00000577716 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
RNF43-203ENST00000577716 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
RNF43-203ENST00000577716 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
RNF43-203ENST00000577716 H3BQV1 296 aa13.3□□□□□ -0.28
RNF43-203ENST00000577716 TPM4P67936 248 aa13.3□□□□□ -0.28
RNF43-203ENST00000577716 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
RNF43-203ENST00000577716 PLEKHH2Q8IVE3 1493 aa13.3□□□□□ -0.28
RNF43-203ENST00000577716 CCDC141Q6ZP82 1450 aa13.3□□□□□ -0.28
RNF43-203ENST00000577716 NASPP49321 788 aaPredicted RBP13.3□□□□□ -0.28
RNF43-203ENST00000577716 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
RNF43-203ENST00000577716 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
RNF43-203ENST00000577716 PRAM1Q96QH2 718 aa13.3□□□□□ -0.28
RNF43-203ENST00000577716 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
RNF43-203ENST00000577716 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
RNF43-203ENST00000577716 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
RNF43-203ENST00000577716 CT47B1P0C2W7 299 aaPredicted RBP13.29□□□□□ -0.28
RNF43-203ENST00000577716 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
RNF43-203ENST00000577716 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
RNF43-203ENST00000577716 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
RNF43-203ENST00000577716 BECN2A8MW95 431 aa13.27□□□□□ -0.28
RNF43-203ENST00000577716 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.28
RNF43-203ENST00000577716 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.28
RNF43-203ENST00000577716 NUP153P49790 1475 aaKnown RBP13.27□□□□□ -0.29
RNF43-203ENST00000577716 NEK4P51957 841 aa13.27□□□□□ -0.29
RNF43-203ENST00000577716 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.29
RNF43-203ENST00000577716 RNF214Q8ND24 703 aa13.27□□□□□ -0.29
RNF43-203ENST00000577716 NEXNQ0ZGT2 675 aa13.27□□□□□ -0.29
RNF43-203ENST00000577716 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
RNF43-203ENST00000577716 MCM4P33991 863 aa13.26□□□□□ -0.29
RNF43-203ENST00000577716 RABEP1Q15276 862 aa13.26□□□□□ -0.29
RNF43-203ENST00000577716 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
RNF43-203ENST00000577716 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.26□□□□□ -0.29
RNF43-203ENST00000577716 FAM69CQ0P6D2 419 aa13.26□□□□□ -0.29
RNF43-203ENST00000577716 CABP1Q9NZU7 370 aa13.26□□□□□ -0.29
RNF43-203ENST00000577716 CTTNBP2Q8WZ74 1663 aa13.25□□□□□ -0.29
RNF43-203ENST00000577716 CCDC34Q96HJ3 373 aa13.25□□□□□ -0.29
RNF43-203ENST00000577716 UBTFL1P0CB47 393 aaPredicted RBP13.25□□□□□ -0.29
RNF43-203ENST00000577716 RARSP54136 660 aaKnown RBP13.24□□□□□ -0.29
RNF43-203ENST00000577716 TOMM22Q9NS69 142 aa13.24□□□□□ -0.29
RNF43-203ENST00000577716 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
RNF43-203ENST00000577716 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
RNF43-203ENST00000577716 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
RNF43-203ENST00000577716 HSP90AB4PQ58FF6 505 aa13.24□□□□□ -0.29
RNF43-203ENST00000577716 KIF14Q15058 1648 aa13.23□□□□□ -0.29
RNF43-203ENST00000577716 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
RNF43-203ENST00000577716 GNAI3P08754 354 aa13.23□□□□□ -0.29
RNF43-203ENST00000577716 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
RNF43-203ENST00000577716 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
RNF43-203ENST00000577716 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
RNF43-203ENST00000577716 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
RNF43-203ENST00000577716 BICD2Q8TD16 824 aa13.23□□□□□ -0.29
RNF43-203ENST00000577716 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
RNF43-203ENST00000577716 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
RNF43-203ENST00000577716 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
RNF43-203ENST00000577716 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
RNF43-203ENST00000577716 ERC2O15083 957 aa13.22□□□□□ -0.29
RNF43-203ENST00000577716 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
RNF43-203ENST00000577716 NLRP6P59044 892 aa13.22□□□□□ -0.29
RNF43-203ENST00000577716 SULT6B1Q6IMI4 303 aa13.22□□□□□ -0.29
RNF43-203ENST00000577716 MBD3O95983 291 aa13.21□□□□□ -0.29
RNF43-203ENST00000577716 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
RNF43-203ENST00000577716 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
RNF43-203ENST00000577716 ISY1Q9ULR0 285 aaKnown RBP13.21□□□□□ -0.29
RNF43-203ENST00000577716 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
RNF43-203ENST00000577716 ATP10BO94823 1461 aa13.21□□□□□ -0.3
RNF43-203ENST00000577716 SLC4A2P04920 1241 aa13.21□□□□□ -0.3
RNF43-203ENST00000577716 NKTRP30414 1462 aaKnown RBP13.21□□□□□ -0.3
RNF43-203ENST00000577716 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
RNF43-203ENST00000577716 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms