RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 CDC42BPGQ6DT37 1551 aa38.23■■■■□ 3.71
PPP4R1-204ENST00000577393 PRAM1Q96QH2 718 aa38.21■■■■□ 3.71
PPP4R1-204ENST00000577393 NEUROD1Q13562 356 aa38.2■■■■□ 3.71
PPP4R1-204ENST00000577393 ORAI2Q96SN7 254 aa38.2■■■■□ 3.71
PPP4R1-204ENST00000577393 TRAK1Q9UPV9 953 aa38.2■■■■□ 3.71
PPP4R1-204ENST00000577393 JCADQ9P266 1359 aa38.19■■■■□ 3.7
PPP4R1-204ENST00000577393 DLC1Q96QB1 1528 aa38.19■■■■□ 3.7
PPP4R1-204ENST00000577393 SAFB2Q14151 953 aaKnown RBP eCLIP38.17■■■■□ 3.7
PPP4R1-204ENST00000577393 DDX17Q92841 729 aaKnown RBP38.17■■■■□ 3.7
PPP4R1-204ENST00000577393 L3MBTL2Q969R5 705 aa38.17■■■■□ 3.7
PPP4R1-204ENST00000577393 POGKQ9P215 609 aa38.17■■■■□ 3.7
PPP4R1-204ENST00000577393 NHSL1Q5SYE7 1610 aa38.15■■■■□ 3.7
PPP4R1-204ENST00000577393 NUTM2FA1L443 756 aa38.12■■■■□ 3.69
PPP4R1-204ENST00000577393 ILDR2Q71H61 639 aa38.11■■■■□ 3.69
PPP4R1-204ENST00000577393 PHF23Q9BUL5 403 aaPredicted RBP38.11■■■■□ 3.69
PPP4R1-204ENST00000577393 ESCO1Q5FWF5 840 aa38.1■■■■□ 3.69
PPP4R1-204ENST00000577393 KIAA1210Q9ULL0 1709 aa38.07■■■■□ 3.69
PPP4R1-204ENST00000577393 FMN2Q9NZ56 1722 aa38.06■■■■□ 3.68
PPP4R1-204ENST00000577393 NBPF1Q3BBV0 1214 aa38.05■■■■□ 3.68
PPP4R1-204ENST00000577393 LRRC59Q96AG4 307 aaKnown RBP38.05■■■■□ 3.68
PPP4R1-204ENST00000577393 SPATA31A6Q5VVP1 1343 aa38.02■■■■□ 3.68
PPP4R1-204ENST00000577393 SHPRHQ149N8 1683 aa38.01■■■■□ 3.68
PPP4R1-204ENST00000577393 SOS2Q07890 1332 aaPredicted RBP38■■■■□ 3.67
PPP4R1-204ENST00000577393 MINK1Q8N4C8 1332 aaPredicted RBP38■■■■□ 3.67
PPP4R1-204ENST00000577393 HIRIP3Q9BW71 556 aaPredicted RBP37.99■■■■□ 3.67
PPP4R1-204ENST00000577393 ARHGEF28Q8N1W1 1705 aaKnown RBP37.98■■■■□ 3.67
PPP4R1-204ENST00000577393 NPHP3Q7Z494 1330 aa37.96■■■■□ 3.67
PPP4R1-204ENST00000577393 FOXO3O43524 673 aa37.96■■■■□ 3.67
PPP4R1-204ENST00000577393 ADGRB2O60241 1585 aa37.96■■■■□ 3.67
PPP4R1-204ENST00000577393 RGS17Q9UGC6 210 aaPredicted RBP37.93■■■■□ 3.66
PPP4R1-204ENST00000577393 LRP6O75581 1613 aa37.93■■■■□ 3.66
PPP4R1-204ENST00000577393 PNPLA6Q8IY17 1366 aa37.93■■■■□ 3.66
PPP4R1-204ENST00000577393 RGPD8O14715 1765 aaPredicted RBP37.91■■■■□ 3.66
PPP4R1-204ENST00000577393 NUTM2BA6NNL0 878 aaPredicted RBP37.9■■■■□ 3.66
PPP4R1-204ENST00000577393 NUTM2EB1AL46 878 aaPredicted RBP37.9■■■■□ 3.66
PPP4R1-204ENST00000577393 NUTM2AQ8IVF1 878 aaPredicted RBP37.9■■■■□ 3.66
PPP4R1-204ENST00000577393 WASLO00401 505 aaPredicted RBP37.89■■■■□ 3.66
PPP4R1-204ENST00000577393 XPCQ01831 940 aaPredicted RBP37.89■■■■□ 3.66
PPP4R1-204ENST00000577393 PCGF6Q9BYE7 350 aa37.89■■■■□ 3.66
PPP4R1-204ENST00000577393 PHF8Q9UPP1 1060 aa37.89■■■■□ 3.66
PPP4R1-204ENST00000577393 ANKARQ7Z5J8 1434 aa37.87■■■■□ 3.65
PPP4R1-204ENST00000577393 PXDNQ92626 1479 aa37.87■■■■□ 3.65
PPP4R1-204ENST00000577393 KIF1AQ12756 1690 aa37.86■■■■□ 3.65
PPP4R1-204ENST00000577393 MEX3CQ5U5Q3 659 aaKnown RBP37.86■■■■□ 3.65
PPP4R1-204ENST00000577393 TONSLQ96HA7 1378 aa37.85■■■■□ 3.65
PPP4R1-204ENST00000577393 TRPM1Q7Z4N2 1603 aa37.84■■■■□ 3.65
PPP4R1-204ENST00000577393 USP32Q8NFA0 1604 aa37.84■■■■□ 3.65
PPP4R1-204ENST00000577393 NBPF8Q3BBV2 869 aa37.84■■■■□ 3.65
PPP4R1-204ENST00000577393 EIF3AQ14152 1382 aaKnown RBP37.83■■■■□ 3.65
PPP4R1-204ENST00000577393 PRR36Q9H6K5 1346 aa37.82■■■■□ 3.64
PPP4R1-204ENST00000577393 TULP4Q9NRJ4 1543 aa37.81■■■■□ 3.64
PPP4R1-204ENST00000577393 KRT28Q7Z3Y7 464 aa37.79■■■■□ 3.64
PPP4R1-204ENST00000577393 PMFBP1Q8TBY8 1022 aa37.79■■■■□ 3.64
PPP4R1-204ENST00000577393 ROCK2O75116 1388 aaKnown RBP37.79■■■■□ 3.64
PPP4R1-204ENST00000577393 CENPJQ9HC77 1338 aaPredicted RBP37.77■■■■□ 3.64
PPP4R1-204ENST00000577393 POTEAQ6S8J7 498 aa37.75■■■■□ 3.63
PPP4R1-204ENST00000577393 CDK19Q9BWU1 502 aa37.75■■■■□ 3.63
PPP4R1-204ENST00000577393 SPATA31A3Q5VYP0 1347 aa37.72■■■■□ 3.63
PPP4R1-204ENST00000577393 PSME1Q06323 249 aa37.72■■■■□ 3.63
PPP4R1-204ENST00000577393 NUDT16Q96DE0 195 aaKnown RBP37.71■■■■□ 3.63
PPP4R1-204ENST00000577393 COL22A1Q8NFW1 1626 aaPredicted RBP37.7■■■■□ 3.63
PPP4R1-204ENST00000577393 ADAMTS2O95450 1211 aa37.68■■■■□ 3.62
PPP4R1-204ENST00000577393 ATP7BP35670 1465 aa37.68■■■■□ 3.62
PPP4R1-204ENST00000577393 GPRASP1Q5JY77 1395 aa37.68■■■■□ 3.62
PPP4R1-204ENST00000577393 SOCS7O14512 581 aa37.67■■■■□ 3.62
PPP4R1-204ENST00000577393 C8orf37Q96NL8 207 aa37.65■■■■□ 3.62
PPP4R1-204ENST00000577393 QRICH2Q9H0J4 1663 aa37.65■■■■□ 3.62
PPP4R1-204ENST00000577393 ZNF772Q68DY9 489 aaPredicted RBP37.64■■■■□ 3.62
PPP4R1-204ENST00000577393 SBNO1A3KN83 1393 aa37.64■■■■□ 3.62
PPP4R1-204ENST00000577393 NGDNQ8NEJ9 315 aaKnown RBP37.63■■■■□ 3.61
PPP4R1-204ENST00000577393 AFF2P51816 1311 aa37.62■■■■□ 3.61
PPP4R1-204ENST00000577393 TNS3Q68CZ2 1445 aa37.62■■■■□ 3.61
PPP4R1-204ENST00000577393 CARD11Q9BXL7 1154 aa37.61■■■■□ 3.61
PPP4R1-204ENST00000577393 RALGAPBQ86X10 1494 aa37.6■■■■□ 3.61
PPP4R1-204ENST00000577393 CCDC61Q9Y6R9 512 aa37.6■■■■□ 3.61
PPP4R1-204ENST00000577393 ITSN1Q15811 1721 aa37.6■■■■□ 3.61
PPP4R1-204ENST00000577393 SRPK2P78362 688 aaKnown RBP37.59■■■■□ 3.61
PPP4R1-204ENST00000577393 LMOD2Q6P5Q4 547 aa37.57■■■■□ 3.6
PPP4R1-204ENST00000577393 NGLY1Q96IV0 654 aa37.57■■■■□ 3.6
PPP4R1-204ENST00000577393 CABP2Q9NPB3 220 aa37.57■■■■□ 3.6
PPP4R1-204ENST00000577393 CLSPNQ9HAW4 1339 aa37.56■■■■□ 3.6
PPP4R1-204ENST00000577393 ARHGEF10O15013 1369 aa37.54■■■■□ 3.6
PPP4R1-204ENST00000577393 TOPAZ1Q8N9V7 1692 aa37.53■■■■□ 3.6
PPP4R1-204ENST00000577393 TRPM3Q9HCF6 1732 aaPredicted RBP37.53■■■■□ 3.6
PPP4R1-204ENST00000577393 PLEKHG3A1L390 1219 aa37.52■■■■□ 3.6
PPP4R1-204ENST00000577393 EVC2Q86UK5 1308 aa37.52■■■■□ 3.6
PPP4R1-204ENST00000577393 ACEP12821 1306 aa37.5■■■■□ 3.59
PPP4R1-204ENST00000577393 PLEKHG5O94827 1062 aa37.49■■■■□ 3.59
PPP4R1-204ENST00000577393 CABLES1Q8TDN4 633 aa37.49■■■■□ 3.59
PPP4R1-204ENST00000577393 POLR3AO14802 1390 aaPredicted RBP37.49■■■■□ 3.59
PPP4R1-204ENST00000577393 PAK3O75914 559 aaPredicted RBP37.47■■■■□ 3.59
PPP4R1-204ENST00000577393 PPIP5K1Q6PFW1 1433 aa37.46■■■■□ 3.59
PPP4R1-204ENST00000577393 FNBP4Q8N3X1 1017 aaPredicted RBP37.46■■■■□ 3.59
PPP4R1-204ENST00000577393 HAP1P54257 671 aaPredicted RBP37.45■■■■□ 3.59
PPP4R1-204ENST00000577393 ALS2Q96Q42 1657 aa37.44■■■■□ 3.58
PPP4R1-204ENST00000577393 MARF1Q9Y4F3 1742 aaKnown RBP37.44■■■■□ 3.58
PPP4R1-204ENST00000577393 QTRT2Q9H974 415 aaKnown RBP37.43■■■■□ 3.58
PPP4R1-204ENST00000577393 USP21Q9UK80 565 aa37.43■■■■□ 3.58
PPP4R1-204ENST00000577393 TIMELESSQ9UNS1 1208 aa37.43■■■■□ 3.58
PPP4R1-204ENST00000577393 RXRBP28702 533 aa37.42■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms