RNA–Protein interactions for RNA: ENST00000577268.1

CCDC178-206, Transcript of coiled-coil domain containing 178, humanhuman

TSL 5

Gene CCDC178, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-206ENST00000577268 PHOX2BQ99453 314 aa10.69□□□□□ -0.7
CCDC178-206ENST00000577268 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
CCDC178-206ENST00000577268 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
CCDC178-206ENST00000577268 SMCPP49901 116 aaPredicted RBP10.67□□□□□ -0.7
CCDC178-206ENST00000577268 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
CCDC178-206ENST00000577268 WIPF1O43516 503 aa10.66□□□□□ -0.7
CCDC178-206ENST00000577268 WNT7AO00755 349 aa10.65□□□□□ -0.7
CCDC178-206ENST00000577268 Q3C1V9 767 aa10.65□□□□□ -0.7
CCDC178-206ENST00000577268 LCE2CQ5TA81 110 aa10.64□□□□□ -0.71
CCDC178-206ENST00000577268 SNIP1Q8TAD8 396 aaKnown RBP10.64□□□□□ -0.71
CCDC178-206ENST00000577268 SMPD1P17405 629 aa10.62□□□□□ -0.71
CCDC178-206ENST00000577268 TRIM32Q13049 653 aa10.62□□□□□ -0.71
CCDC178-206ENST00000577268 MMP16P51512 607 aa10.61□□□□□ -0.71
CCDC178-206ENST00000577268 GPIHBP1Q8IV16 184 aa10.61□□□□□ -0.71
CCDC178-206ENST00000577268 LOC100996750A0A140TA64 210 aa10.6□□□□□ -0.71
CCDC178-206ENST00000577268 KRTAP4-6Q9BYQ5 205 aa10.6□□□□□ -0.71
CCDC178-206ENST00000577268 MRGPRX2Q96LB1 330 aa10.59□□□□□ -0.71
CCDC178-206ENST00000577268 USB1Q9BQ65 265 aaKnown RBP10.59□□□□□ -0.71
CCDC178-206ENST00000577268 CD46P15529 392 aa10.58□□□□□ -0.72
CCDC178-206ENST00000577268 INSM1Q01101 510 aaPredicted RBP10.58□□□□□ -0.72
CCDC178-206ENST00000577268 ATP13A2Q9NQ11 1180 aa10.58□□□□□ -0.72
CCDC178-206ENST00000577268 J3QL48 77 aa10.57□□□□□ -0.72
CCDC178-206ENST00000577268 KDM4AO75164 1064 aa10.56□□□□□ -0.72
CCDC178-206ENST00000577268 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
CCDC178-206ENST00000577268 DXOO77932 396 aaKnown RBP10.55□□□□□ -0.72
CCDC178-206ENST00000577268 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
CCDC178-206ENST00000577268 SENP2Q9HC62 589 aa10.55□□□□□ -0.72
CCDC178-206ENST00000577268 SNRPBP14678 240 aaKnown RBP10.54□□□□□ -0.72
CCDC178-206ENST00000577268 RC3H1Q5TC82 1133 aaKnown RBP10.53□□□□□ -0.72
CCDC178-206ENST00000577268 HPS1Q92902 700 aa10.53□□□□□ -0.72
CCDC178-206ENST00000577268 USP46P62068 366 aa10.52□□□□□ -0.73
CCDC178-206ENST00000577268 TRIM47Q96LD4 638 aa10.52□□□□□ -0.73
CCDC178-206ENST00000577268 TERTO14746 1132 aaKnown RBP10.51□□□□□ -0.73
CCDC178-206ENST00000577268 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
CCDC178-206ENST00000577268 WNT7BP56706 349 aa10.5□□□□□ -0.73
CCDC178-206ENST00000577268 MAP2K5Q13163 448 aa10.5□□□□□ -0.73
CCDC178-206ENST00000577268 HLA-CQ95604 372 aa10.5□□□□□ -0.73
CCDC178-206ENST00000577268 IRF6O14896 467 aa10.49□□□□□ -0.73
CCDC178-206ENST00000577268 MDM2Q00987 491 aaPredicted RBP10.49□□□□□ -0.73
CCDC178-206ENST00000577268 KIFC2Q96AC6 838 aa10.49□□□□□ -0.73
CCDC178-206ENST00000577268 SKOR1P84550 965 aa10.48□□□□□ -0.73
CCDC178-206ENST00000577268 HOXA2O43364 376 aa10.46□□□□□ -0.73
CCDC178-206ENST00000577268 ALDH1A1P00352 501 aa10.45□□□□□ -0.74
CCDC178-206ENST00000577268 MINK1Q8N4C8 1332 aaPredicted RBP10.44□□□□□ -0.74
CCDC178-206ENST00000577268 JUNDP17535 347 aa10.44□□□□□ -0.74
CCDC178-206ENST00000577268 GUCA2AQ02747 115 aa10.43□□□□□ -0.74
CCDC178-206ENST00000577268 SYMPKQ92797 1274 aaKnown RBP10.43□□□□□ -0.74
CCDC178-206ENST00000577268 TULP1O00294 542 aaPredicted RBP10.42□□□□□ -0.74
CCDC178-206ENST00000577268 PTCRAQ6ISU1 281 aaPredicted RBP10.4□□□□□ -0.74
CCDC178-206ENST00000577268 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
CCDC178-206ENST00000577268 EHBP1Q8NDI1 1231 aa10.4□□□□□ -0.74
CCDC178-206ENST00000577268 SLC16A10Q8TF71 515 aa10.4□□□□□ -0.74
CCDC178-206ENST00000577268 NUDT12Q9BQG2 462 aa10.4□□□□□ -0.74
CCDC178-206ENST00000577268 SIAH2O43255 324 aa10.39□□□□□ -0.75
CCDC178-206ENST00000577268 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
CCDC178-206ENST00000577268 CLCN1P35523 988 aa10.39□□□□□ -0.75
CCDC178-206ENST00000577268 RETREG3Q86VR2 466 aa10.39□□□□□ -0.75
CCDC178-206ENST00000577268 GPCPD1Q9NPB8 672 aa10.39□□□□□ -0.75
CCDC178-206ENST00000577268 HAP1P54257 671 aaPredicted RBP10.38□□□□□ -0.75
CCDC178-206ENST00000577268 FAM217BQ9NTX9 383 aaPredicted RBP10.38□□□□□ -0.75
CCDC178-206ENST00000577268 WASF2Q9Y6W5 498 aa10.38□□□□□ -0.75
CCDC178-206ENST00000577268 CAPN5O15484 640 aaPredicted RBP10.37□□□□□ -0.75
CCDC178-206ENST00000577268 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
CCDC178-206ENST00000577268 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
CCDC178-206ENST00000577268 NXF1Q9UBU9 619 aaKnown RBP10.37□□□□□ -0.75
CCDC178-206ENST00000577268 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
CCDC178-206ENST00000577268 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
CCDC178-206ENST00000577268 FDX1P10109 184 aa10.34□□□□□ -0.75
CCDC178-206ENST00000577268 BMP1P13497 986 aa10.34□□□□□ -0.75
CCDC178-206ENST00000577268 TRIM46Q7Z4K8 759 aa10.34□□□□□ -0.75
CCDC178-206ENST00000577268 MS4A1P11836 297 aa10.33□□□□□ -0.76
CCDC178-206ENST00000577268 GMPRP36959 345 aa10.33□□□□□ -0.76
CCDC178-206ENST00000577268 SH3BP2P78314 561 aa10.33□□□□□ -0.76
CCDC178-206ENST00000577268 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
CCDC178-206ENST00000577268 CCNYL3P0C7X3 344 aa10.32□□□□□ -0.76
CCDC178-206ENST00000577268 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
CCDC178-206ENST00000577268 NPAS3Q8IXF0 933 aa10.31□□□□□ -0.76
CCDC178-206ENST00000577268 ZSCAN1Q8NBB4 408 aa10.3□□□□□ -0.76
CCDC178-206ENST00000577268 IRF7Q92985 503 aa10.3□□□□□ -0.76
CCDC178-206ENST00000577268 EVA1BQ9NVM1 165 aa10.29□□□□□ -0.76
CCDC178-206ENST00000577268 PTPRNQ16849 979 aa10.28□□□□□ -0.76
CCDC178-206ENST00000577268 BAP1Q92560 729 aa10.28□□□□□ -0.76
CCDC178-206ENST00000577268 UNC93B1Q9H1C4 597 aa10.28□□□□□ -0.76
CCDC178-206ENST00000577268 SSTR3P32745 418 aaPredicted RBP10.27□□□□□ -0.77
CCDC178-206ENST00000577268 VEGFBP49765 207 aa10.27□□□□□ -0.77
CCDC178-206ENST00000577268 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
CCDC178-206ENST00000577268 KCNH2Q12809 1159 aa10.26□□□□□ -0.77
CCDC178-206ENST00000577268 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
CCDC178-206ENST00000577268 ZFP42Q96MM3 310 aa10.26□□□□□ -0.77
CCDC178-206ENST00000577268 PLEKHG3A1L390 1219 aa10.25□□□□□ -0.77
CCDC178-206ENST00000577268 H3BM21 787 aa10.25□□□□□ -0.77
CCDC178-206ENST00000577268 NDUFV2P19404 249 aa10.24□□□□□ -0.77
CCDC178-206ENST00000577268 VARSP26640 1264 aaKnown RBP10.24□□□□□ -0.77
CCDC178-206ENST00000577268 PRR7Q8TB68 274 aa10.24□□□□□ -0.77
CCDC178-206ENST00000577268 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
CCDC178-206ENST00000577268 MPNDQ8N594 471 aa10.23□□□□□ -0.77
CCDC178-206ENST00000577268 TLL2Q9Y6L7 1015 aa10.23□□□□□ -0.77
CCDC178-206ENST00000577268 NNTQ13423 1086 aa10.22□□□□□ -0.77
CCDC178-206ENST00000577268 ZNF511Q8NB15 262 aa10.22□□□□□ -0.77
CCDC178-206ENST00000577268 ERBB4Q15303 1308 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms