RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
CIITA-211ENST00000576601 FOXD1Q16676 465 aa21.31■■□□□ 1
CIITA-211ENST00000576601 CCDC125Q86Z20 511 aa21.31■■□□□ 1
CIITA-211ENST00000576601 ROCK1Q13464 1354 aa21.31■■□□□ 1
CIITA-211ENST00000576601 ROBO2Q9HCK4 1378 aa21.31■■□□□ 1
CIITA-211ENST00000576601 CDC42BPGQ6DT37 1551 aa21.3■■□□□ 1
CIITA-211ENST00000576601 NUP155O75694 1391 aa21.29■■□□□ 1
CIITA-211ENST00000576601 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
CIITA-211ENST00000576601 RALGAPBQ86X10 1494 aa21.26■□□□□ 0.99
CIITA-211ENST00000576601 PPLO60437 1756 aa21.25■□□□□ 0.99
CIITA-211ENST00000576601 USP32Q8NFA0 1604 aa21.25■□□□□ 0.99
CIITA-211ENST00000576601 SLIT2O94813 1529 aa21.24■□□□□ 0.99
CIITA-211ENST00000576601 GJD4Q96KN9 370 aaPredicted RBP21.24■□□□□ 0.99
CIITA-211ENST00000576601 PLCH1Q4KWH8 1693 aa21.24■□□□□ 0.99
CIITA-211ENST00000576601 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
CIITA-211ENST00000576601 ABCA3Q99758 1704 aa21.23■□□□□ 0.99
CIITA-211ENST00000576601 DEFB132Q7Z7B7 95 aa21.21■□□□□ 0.99
CIITA-211ENST00000576601 NWD2Q9ULI1 1742 aa21.21■□□□□ 0.99
CIITA-211ENST00000576601 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
CIITA-211ENST00000576601 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
CIITA-211ENST00000576601 NPHP3Q7Z494 1330 aa21.17■□□□□ 0.98
CIITA-211ENST00000576601 RGPD8O14715 1765 aaPredicted RBP21.16■□□□□ 0.98
CIITA-211ENST00000576601 KIF1AQ12756 1690 aa21.15■□□□□ 0.98
CIITA-211ENST00000576601 XPCQ01831 940 aaPredicted RBP21.14■□□□□ 0.97
CIITA-211ENST00000576601 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.97
CIITA-211ENST00000576601 KNDC1Q76NI1 1749 aa21.14■□□□□ 0.97
CIITA-211ENST00000576601 NRAPQ86VF7 1730 aa21.13■□□□□ 0.97
CIITA-211ENST00000576601 UNC5CLQ8IV45 518 aa21.12■□□□□ 0.97
CIITA-211ENST00000576601 RGPD1P0DJD0 1748 aa21.11■□□□□ 0.97
CIITA-211ENST00000576601 TNS1Q9HBL0 1735 aaKnown RBP21.11■□□□□ 0.97
CIITA-211ENST00000576601 IFT172Q9UG01 1749 aa21.11■□□□□ 0.97
CIITA-211ENST00000576601 FOXO3O43524 673 aa21.1■□□□□ 0.97
CIITA-211ENST00000576601 ESCO1Q5FWF5 840 aa21.1■□□□□ 0.97
CIITA-211ENST00000576601 NAIPQ13075 1403 aa21.1■□□□□ 0.97
CIITA-211ENST00000576601 TECPR2O15040 1411 aa21.07■□□□□ 0.96
CIITA-211ENST00000576601 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
CIITA-211ENST00000576601 HRCP23327 699 aa21.06■□□□□ 0.96
CIITA-211ENST00000576601 ITGAEP38570 1179 aa21.06■□□□□ 0.96
CIITA-211ENST00000576601 SEPT12Q8IYM1 358 aa21.06■□□□□ 0.96
CIITA-211ENST00000576601 SPATA31A3Q5VYP0 1347 aa21.05■□□□□ 0.96
CIITA-211ENST00000576601 UTRNP46939 3433 aa21.04■□□□□ 0.96
CIITA-211ENST00000576601 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
CIITA-211ENST00000576601 LRPPRCP42704 1394 aaKnown RBP21.03■□□□□ 0.96
CIITA-211ENST00000576601 ONECUT3O60422 494 aaPredicted RBP21.03■□□□□ 0.96
CIITA-211ENST00000576601 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.96
CIITA-211ENST00000576601 VPS72Q15906 364 aa21.02■□□□□ 0.96
CIITA-211ENST00000576601 SF3B2Q13435 895 aaKnown RBP21.01■□□□□ 0.95
CIITA-211ENST00000576601 TNS3Q68CZ2 1445 aa21.01■□□□□ 0.95
CIITA-211ENST00000576601 NUTM2FA1L443 756 aa21■□□□□ 0.95
CIITA-211ENST00000576601 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
CIITA-211ENST00000576601 PLEKHH1Q9ULM0 1364 aa20.99■□□□□ 0.95
CIITA-211ENST00000576601 KRT27Q7Z3Y8 459 aa20.99■□□□□ 0.95
CIITA-211ENST00000576601 CRYBG1Q9Y4K1 1723 aa20.98■□□□□ 0.95
CIITA-211ENST00000576601 TRPM3Q9HCF6 1732 aaPredicted RBP20.98■□□□□ 0.95
CIITA-211ENST00000576601 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
CIITA-211ENST00000576601 RPGRIP1LQ68CZ1 1315 aa20.96■□□□□ 0.95
CIITA-211ENST00000576601 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.95
CIITA-211ENST00000576601 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
CIITA-211ENST00000576601 RREB1Q92766 1687 aa20.95■□□□□ 0.94
CIITA-211ENST00000576601 ALS2Q96Q42 1657 aa20.95■□□□□ 0.94
CIITA-211ENST00000576601 BAG6P46379 1132 aa20.94■□□□□ 0.94
CIITA-211ENST00000576601 CABLES1Q8TDN4 633 aa20.94■□□□□ 0.94
CIITA-211ENST00000576601 COL14A1Q05707 1796 aaKnown RBP20.94■□□□□ 0.94
CIITA-211ENST00000576601 NRXN1Q9ULB1 1477 aa20.93■□□□□ 0.94
CIITA-211ENST00000576601 NUP188Q5SRE5 1749 aa20.92■□□□□ 0.94
CIITA-211ENST00000576601 KRT28Q7Z3Y7 464 aa20.91■□□□□ 0.94
CIITA-211ENST00000576601 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
CIITA-211ENST00000576601 ABCC11Q96J66 1382 aa20.91■□□□□ 0.94
CIITA-211ENST00000576601 EN1Q05925 392 aaPredicted RBP20.9■□□□□ 0.94
CIITA-211ENST00000576601 R3HDM1Q15032 1099 aaKnown RBP20.9■□□□□ 0.94
CIITA-211ENST00000576601 ADGRB2O60241 1585 aa20.89■□□□□ 0.94
CIITA-211ENST00000576601 SBNO1A3KN83 1393 aa20.89■□□□□ 0.93
CIITA-211ENST00000576601 CCDC9Q9Y3X0 531 aaKnown RBP20.89■□□□□ 0.93
CIITA-211ENST00000576601 STK26Q9P289 416 aa20.88■□□□□ 0.93
CIITA-211ENST00000576601 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
CIITA-211ENST00000576601 FAM83GA6ND36 823 aa20.87■□□□□ 0.93
CIITA-211ENST00000576601 FAM98CQ17RN3 349 aaKnown RBP20.87■□□□□ 0.93
CIITA-211ENST00000576601 SPATA31E1Q6ZUB1 1445 aa20.87■□□□□ 0.93
CIITA-211ENST00000576601 FAM182BQ5T319 152 aa20.86■□□□□ 0.93
CIITA-211ENST00000576601 YTHDC2Q9H6S0 1430 aaKnown RBP20.86■□□□□ 0.93
CIITA-211ENST00000576601 ARHGEF10O15013 1369 aa20.85■□□□□ 0.93
CIITA-211ENST00000576601 PLEKHG5O94827 1062 aa20.84■□□□□ 0.93
CIITA-211ENST00000576601 HAP1P54257 671 aaPredicted RBP20.84■□□□□ 0.93
CIITA-211ENST00000576601 TMEM132EQ6IEE7 984 aa20.83■□□□□ 0.93
CIITA-211ENST00000576601 PHF8Q9UPP1 1060 aa20.83■□□□□ 0.93
CIITA-211ENST00000576601 A0A0G2JS52 829 aa20.82■□□□□ 0.92
CIITA-211ENST00000576601 MYT1Q01538 1121 aa20.82■□□□□ 0.92
CIITA-211ENST00000576601 CAMTA1Q9Y6Y1 1673 aa20.81■□□□□ 0.92
CIITA-211ENST00000576601 EZH2Q15910 746 aaKnown RBP20.8■□□□□ 0.92
CIITA-211ENST00000576601 BTG4Q9NY30 223 aa20.79■□□□□ 0.92
CIITA-211ENST00000576601 SPATA31A5Q5VU36 1347 aa20.78■□□□□ 0.92
CIITA-211ENST00000576601 SPATA31A7Q8IWB4 1347 aa20.78■□□□□ 0.92
CIITA-211ENST00000576601 PHRF1Q9P1Y6 1649 aaKnown RBP20.78■□□□□ 0.92
CIITA-211ENST00000576601 CEP350Q5VT06 3117 aa20.78■□□□□ 0.92
CIITA-211ENST00000576601 ANKRD30BQ9BXX2 1392 aa20.78■□□□□ 0.92
CIITA-211ENST00000576601 YY1P25490 414 aa20.78■□□□□ 0.92
CIITA-211ENST00000576601 PSME1Q06323 249 aa20.78■□□□□ 0.92
CIITA-211ENST00000576601 CAMKK2Q96RR4 588 aa20.78■□□□□ 0.92
CIITA-211ENST00000576601 ANKARQ7Z5J8 1434 aa20.76■□□□□ 0.91
CIITA-211ENST00000576601 LMOD2Q6P5Q4 547 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms