RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 XIRP1Q702N8 1843 aaKnown RBP21.43■■□□□ 1.02
TRAPPC1-207ENST00000575639 NBPF1Q3BBV0 1214 aa21.42■■□□□ 1.02
TRAPPC1-207ENST00000575639 ADGRB1O14514 1584 aa21.41■■□□□ 1.02
TRAPPC1-207ENST00000575639 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
TRAPPC1-207ENST00000575639 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
TRAPPC1-207ENST00000575639 TIMELESSQ9UNS1 1208 aa21.38■■□□□ 1.01
TRAPPC1-207ENST00000575639 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
TRAPPC1-207ENST00000575639 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC1-207ENST00000575639 BRINP3Q76B58 766 aa21.36■■□□□ 1.01
TRAPPC1-207ENST00000575639 MST1RQ04912 1400 aa21.36■■□□□ 1.01
TRAPPC1-207ENST00000575639 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
TRAPPC1-207ENST00000575639 POTEAQ6S8J7 498 aa21.35■■□□□ 1.01
TRAPPC1-207ENST00000575639 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
TRAPPC1-207ENST00000575639 C1orf167Q5SNV9 1468 aa21.32■■□□□ 1
TRAPPC1-207ENST00000575639 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
TRAPPC1-207ENST00000575639 MINK1Q8N4C8 1332 aaPredicted RBP21.32■■□□□ 1
TRAPPC1-207ENST00000575639 ESCO1Q5FWF5 840 aa21.31■■□□□ 1
TRAPPC1-207ENST00000575639 NUTM2FA1L443 756 aa21.3■■□□□ 1
TRAPPC1-207ENST00000575639 HIRIP3Q9BW71 556 aaPredicted RBP21.3■■□□□ 1
TRAPPC1-207ENST00000575639 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
TRAPPC1-207ENST00000575639 ORAI2Q96SN7 254 aa21.29■■□□□ 1
TRAPPC1-207ENST00000575639 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
TRAPPC1-207ENST00000575639 NALCNQ8IZF0 1738 aa21.29■■□□□ 1
TRAPPC1-207ENST00000575639 CDC42BPGQ6DT37 1551 aa21.28■■□□□ 1
TRAPPC1-207ENST00000575639 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
TRAPPC1-207ENST00000575639 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
TRAPPC1-207ENST00000575639 WASLO00401 505 aaPredicted RBP21.27■■□□□ 1
TRAPPC1-207ENST00000575639 EIF3AQ14152 1382 aaKnown RBP21.26■□□□□ 0.99
TRAPPC1-207ENST00000575639 GPRASP1Q5JY77 1395 aa21.25■□□□□ 0.99
TRAPPC1-207ENST00000575639 LRRC59Q96AG4 307 aaKnown RBP21.22■□□□□ 0.99
TRAPPC1-207ENST00000575639 NPHP3Q7Z494 1330 aa21.22■□□□□ 0.99
TRAPPC1-207ENST00000575639 RALGAPBQ86X10 1494 aa21.21■□□□□ 0.99
TRAPPC1-207ENST00000575639 DDX17Q92841 729 aaKnown RBP21.21■□□□□ 0.99
TRAPPC1-207ENST00000575639 CDK19Q9BWU1 502 aa21.21■□□□□ 0.99
TRAPPC1-207ENST00000575639 PHF8Q9UPP1 1060 aa21.21■□□□□ 0.99
TRAPPC1-207ENST00000575639 FOXO3O43524 673 aa21.2■□□□□ 0.98
TRAPPC1-207ENST00000575639 JCADQ9P266 1359 aa21.2■□□□□ 0.98
TRAPPC1-207ENST00000575639 ANKARQ7Z5J8 1434 aa21.2■□□□□ 0.98
TRAPPC1-207ENST00000575639 TRPM1Q7Z4N2 1603 aa21.19■□□□□ 0.98
TRAPPC1-207ENST00000575639 AHDC1Q5TGY3 1603 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC1-207ENST00000575639 SRPK2P78362 688 aaKnown RBP21.17■□□□□ 0.98
TRAPPC1-207ENST00000575639 NUDT16Q96DE0 195 aaKnown RBP21.17■□□□□ 0.98
TRAPPC1-207ENST00000575639 SOS2Q07890 1332 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC1-207ENST00000575639 ADGRB2O60241 1585 aa21.17■□□□□ 0.98
TRAPPC1-207ENST00000575639 EVC2Q86UK5 1308 aa21.16■□□□□ 0.98
TRAPPC1-207ENST00000575639 ARHGEF28Q8N1W1 1705 aaKnown RBP21.15■□□□□ 0.98
TRAPPC1-207ENST00000575639 PRR36Q9H6K5 1346 aa21.14■□□□□ 0.97
TRAPPC1-207ENST00000575639 PSME1Q06323 249 aa21.14■□□□□ 0.97
TRAPPC1-207ENST00000575639 PMFBP1Q8TBY8 1022 aa21.14■□□□□ 0.97
TRAPPC1-207ENST00000575639 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.97
TRAPPC1-207ENST00000575639 PHLPP1O60346 1717 aa21.13■□□□□ 0.97
TRAPPC1-207ENST00000575639 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
TRAPPC1-207ENST00000575639 KRT28Q7Z3Y7 464 aa21.13■□□□□ 0.97
TRAPPC1-207ENST00000575639 TULP4Q9NRJ4 1543 aa21.13■□□□□ 0.97
TRAPPC1-207ENST00000575639 SPATA31A6Q5VVP1 1343 aa21.12■□□□□ 0.97
TRAPPC1-207ENST00000575639 XPCQ01831 940 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC1-207ENST00000575639 NGDNQ8NEJ9 315 aaKnown RBP21.12■□□□□ 0.97
TRAPPC1-207ENST00000575639 CABP2Q9NPB3 220 aa21.12■□□□□ 0.97
TRAPPC1-207ENST00000575639 FMN2Q9NZ56 1722 aa21.12■□□□□ 0.97
TRAPPC1-207ENST00000575639 UPF1Q92900 1129 aaKnown RBP eCLIP21.11■□□□□ 0.97
TRAPPC1-207ENST00000575639 COL16A1Q07092 1604 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC1-207ENST00000575639 SBNO2Q9Y2G9 1366 aa21.09■□□□□ 0.97
TRAPPC1-207ENST00000575639 ST20-MTHFSA0A0A6YYL1 179 aa21.08■□□□□ 0.97
TRAPPC1-207ENST00000575639 PLEKHG3A1L390 1219 aa21.07■□□□□ 0.96
TRAPPC1-207ENST00000575639 NHSL1Q5SYE7 1610 aa21.06■□□□□ 0.96
TRAPPC1-207ENST00000575639 PNPLA6Q8IY17 1366 aa21.06■□□□□ 0.96
TRAPPC1-207ENST00000575639 ATP7BP35670 1465 aa21.06■□□□□ 0.96
TRAPPC1-207ENST00000575639 NUTM2BA6NNL0 878 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC1-207ENST00000575639 NUTM2EB1AL46 878 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC1-207ENST00000575639 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
TRAPPC1-207ENST00000575639 NUTM2AQ8IVF1 878 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC1-207ENST00000575639 USP47Q96K76 1375 aa21.05■□□□□ 0.96
TRAPPC1-207ENST00000575639 PXDNQ92626 1479 aa21.05■□□□□ 0.96
TRAPPC1-207ENST00000575639 SPATA31A3Q5VYP0 1347 aa21.04■□□□□ 0.96
TRAPPC1-207ENST00000575639 KIF1AQ12756 1690 aa21.04■□□□□ 0.96
TRAPPC1-207ENST00000575639 SBNO1A3KN83 1393 aa21.03■□□□□ 0.96
TRAPPC1-207ENST00000575639 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
TRAPPC1-207ENST00000575639 CABP1Q9NZU7 370 aa21.03■□□□□ 0.96
TRAPPC1-207ENST00000575639 ATAD2Q6PL18 1390 aa21.02■□□□□ 0.96
TRAPPC1-207ENST00000575639 ACEP12821 1306 aa21.02■□□□□ 0.95
TRAPPC1-207ENST00000575639 PAK3O75914 559 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC1-207ENST00000575639 PUS7Q96PZ0 661 aaKnown RBP21.01■□□□□ 0.95
TRAPPC1-207ENST00000575639 TESK2Q96S53 571 aa21.01■□□□□ 0.95
TRAPPC1-207ENST00000575639 QRICH2Q9H0J4 1663 aa21.01■□□□□ 0.95
TRAPPC1-207ENST00000575639 PPIP5K1Q6PFW1 1433 aa21.01■□□□□ 0.95
TRAPPC1-207ENST00000575639 USP32Q8NFA0 1604 aa21■□□□□ 0.95
TRAPPC1-207ENST00000575639 POLR3AO14802 1390 aaPredicted RBP20.99■□□□□ 0.95
TRAPPC1-207ENST00000575639 ARHGEF10O15013 1369 aa20.99■□□□□ 0.95
TRAPPC1-207ENST00000575639 TMF1P82094 1093 aa20.99■□□□□ 0.95
TRAPPC1-207ENST00000575639 TNS3Q68CZ2 1445 aa20.98■□□□□ 0.95
TRAPPC1-207ENST00000575639 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.95
TRAPPC1-207ENST00000575639 CDCA8Q53HL2 280 aa20.97■□□□□ 0.95
TRAPPC1-207ENST00000575639 HAP1P54257 671 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC1-207ENST00000575639 TMC1Q8TDI8 760 aa20.96■□□□□ 0.95
TRAPPC1-207ENST00000575639 ZNF692Q9BU19 519 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC1-207ENST00000575639 SRCAPQ6ZRS2 3230 aa20.96■□□□□ 0.95
TRAPPC1-207ENST00000575639 ADAMTS2O95450 1211 aa20.95■□□□□ 0.94
TRAPPC1-207ENST00000575639 SHPRHQ149N8 1683 aa20.95■□□□□ 0.94
TRAPPC1-207ENST00000575639 BRD4O60885 1362 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC1-207ENST00000575639 RGPD8O14715 1765 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms