RNA–Protein interactions for RNA: ENST00000573990.1

SPNS2-207, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-207ENST00000573990 KNDC1Q76NI1 1749 aa28.35■■■□□ 2.13
SPNS2-207ENST00000573990 LAMC1P11047 1609 aa28.33■■■□□ 2.13
SPNS2-207ENST00000573990 NUTM2FA1L443 756 aa28.31■■■□□ 2.12
SPNS2-207ENST00000573990 RGS17Q9UGC6 210 aaPredicted RBP28.31■■■□□ 2.12
SPNS2-207ENST00000573990 NHSL1Q5SYE7 1610 aa28.3■■■□□ 2.12
SPNS2-207ENST00000573990 SIRT1Q96EB6 747 aa28.3■■■□□ 2.12
SPNS2-207ENST00000573990 SAFB2Q14151 953 aaKnown RBP eCLIP28.29■■■□□ 2.12
SPNS2-207ENST00000573990 CDC42BPGQ6DT37 1551 aa28.28■■■□□ 2.12
SPNS2-207ENST00000573990 PRAM1Q96QH2 718 aa28.28■■■□□ 2.12
SPNS2-207ENST00000573990 ADGRB1O14514 1584 aa28.28■■■□□ 2.12
SPNS2-207ENST00000573990 STAC3Q96MF2 364 aa28.27■■■□□ 2.12
SPNS2-207ENST00000573990 TRAK1Q9UPV9 953 aa28.27■■■□□ 2.12
SPNS2-207ENST00000573990 ESCO1Q5FWF5 840 aa28.26■■■□□ 2.11
SPNS2-207ENST00000573990 SIN3AQ96ST3 1273 aa28.26■■■□□ 2.11
SPNS2-207ENST00000573990 LRP6O75581 1613 aa28.23■■■□□ 2.11
SPNS2-207ENST00000573990 LRRC59Q96AG4 307 aaKnown RBP28.23■■■□□ 2.11
SPNS2-207ENST00000573990 POGKQ9P215 609 aa28.23■■■□□ 2.11
SPNS2-207ENST00000573990 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
SPNS2-207ENST00000573990 SPATA31A6Q5VVP1 1343 aa28.22■■■□□ 2.11
SPNS2-207ENST00000573990 NUTM2BA6NNL0 878 aaPredicted RBP28.22■■■□□ 2.11
SPNS2-207ENST00000573990 NUTM2EB1AL46 878 aaPredicted RBP28.22■■■□□ 2.11
SPNS2-207ENST00000573990 NUTM2AQ8IVF1 878 aaPredicted RBP28.22■■■□□ 2.11
SPNS2-207ENST00000573990 SOCS7O14512 581 aa28.21■■■□□ 2.11
SPNS2-207ENST00000573990 DLC1Q96QB1 1528 aa28.2■■■□□ 2.1
SPNS2-207ENST00000573990 NEUROD1Q13562 356 aa28.18■■■□□ 2.1
SPNS2-207ENST00000573990 FMN2Q9NZ56 1722 aa28.18■■■□□ 2.1
SPNS2-207ENST00000573990 SOS2Q07890 1332 aaPredicted RBP28.18■■■□□ 2.1
SPNS2-207ENST00000573990 FOXO3O43524 673 aa28.17■■■□□ 2.1
SPNS2-207ENST00000573990 POTEAQ6S8J7 498 aa28.17■■■□□ 2.1
SPNS2-207ENST00000573990 XPCQ01831 940 aaPredicted RBP28.16■■■□□ 2.1
SPNS2-207ENST00000573990 MEX3CQ5U5Q3 659 aaKnown RBP28.16■■■□□ 2.1
SPNS2-207ENST00000573990 CLSPNQ9HAW4 1339 aa28.16■■■□□ 2.1
SPNS2-207ENST00000573990 PNPLA6Q8IY17 1366 aa28.15■■■□□ 2.1
SPNS2-207ENST00000573990 L3MBTL2Q969R5 705 aa28.15■■■□□ 2.1
SPNS2-207ENST00000573990 HIRIP3Q9BW71 556 aaPredicted RBP28.15■■■□□ 2.1
SPNS2-207ENST00000573990 NBPF1Q3BBV0 1214 aa28.14■■■□□ 2.1
SPNS2-207ENST00000573990 MINK1Q8N4C8 1332 aaPredicted RBP28.14■■■□□ 2.09
SPNS2-207ENST00000573990 NPHP3Q7Z494 1330 aa28.11■■■□□ 2.09
SPNS2-207ENST00000573990 RGPD8O14715 1765 aaPredicted RBP28.1■■■□□ 2.09
SPNS2-207ENST00000573990 PXDNQ92626 1479 aa28.08■■■□□ 2.09
SPNS2-207ENST00000573990 PHF8Q9UPP1 1060 aa28.06■■■□□ 2.08
SPNS2-207ENST00000573990 ARHGEF28Q8N1W1 1705 aaKnown RBP28.05■■■□□ 2.08
SPNS2-207ENST00000573990 KIAA1210Q9ULL0 1709 aa28.05■■■□□ 2.08
SPNS2-207ENST00000573990 ADGRB2O60241 1585 aa28.04■■■□□ 2.08
SPNS2-207ENST00000573990 ADAMTS2O95450 1211 aa28.03■■■□□ 2.08
SPNS2-207ENST00000573990 KRT28Q7Z3Y7 464 aa28.03■■■□□ 2.08
SPNS2-207ENST00000573990 USP32Q8NFA0 1604 aa28.03■■■□□ 2.08
SPNS2-207ENST00000573990 WASLO00401 505 aaPredicted RBP28.02■■■□□ 2.08
SPNS2-207ENST00000573990 PMFBP1Q8TBY8 1022 aa28.02■■■□□ 2.08
SPNS2-207ENST00000573990 KIF1AQ12756 1690 aa28.01■■■□□ 2.07
SPNS2-207ENST00000573990 PRR36Q9H6K5 1346 aa28.01■■■□□ 2.07
SPNS2-207ENST00000573990 CCER1Q8TC90 406 aaPredicted RBP28■■■□□ 2.07
SPNS2-207ENST00000573990 C8orf37Q96NL8 207 aa28■■■□□ 2.07
SPNS2-207ENST00000573990 ANKARQ7Z5J8 1434 aa27.99■■■□□ 2.07
SPNS2-207ENST00000573990 AFF2P51816 1311 aa27.98■■■□□ 2.07
SPNS2-207ENST00000573990 ZNF772Q68DY9 489 aaPredicted RBP27.98■■■□□ 2.07
SPNS2-207ENST00000573990 COL22A1Q8NFW1 1626 aaPredicted RBP27.96■■■□□ 2.07
SPNS2-207ENST00000573990 SPATA31A3Q5VYP0 1347 aa27.95■■■□□ 2.07
SPNS2-207ENST00000573990 PSME1Q06323 249 aa27.95■■■□□ 2.06
SPNS2-207ENST00000573990 TULP4Q9NRJ4 1543 aa27.94■■■□□ 2.06
SPNS2-207ENST00000573990 NGLY1Q96IV0 654 aa27.94■■■□□ 2.06
SPNS2-207ENST00000573990 CDK19Q9BWU1 502 aa27.94■■■□□ 2.06
SPNS2-207ENST00000573990 NBPF8Q3BBV2 869 aa27.93■■■□□ 2.06
SPNS2-207ENST00000573990 TONSLQ96HA7 1378 aa27.92■■■□□ 2.06
SPNS2-207ENST00000573990 EIF3AQ14152 1382 aaKnown RBP27.91■■■□□ 2.06
SPNS2-207ENST00000573990 PLEKHG5O94827 1062 aa27.91■■■□□ 2.06
SPNS2-207ENST00000573990 NUDT16Q96DE0 195 aaKnown RBP27.91■■■□□ 2.06
SPNS2-207ENST00000573990 TRPM1Q7Z4N2 1603 aa27.9■■■□□ 2.06
SPNS2-207ENST00000573990 TIMELESSQ9UNS1 1208 aa27.9■■■□□ 2.06
SPNS2-207ENST00000573990 LMOD2Q6P5Q4 547 aa27.89■■■□□ 2.06
SPNS2-207ENST00000573990 CENPJQ9HC77 1338 aaPredicted RBP27.88■■■□□ 2.05
SPNS2-207ENST00000573990 CABLES1Q8TDN4 633 aa27.87■■■□□ 2.05
SPNS2-207ENST00000573990 TNS3Q68CZ2 1445 aa27.86■■■□□ 2.05
SPNS2-207ENST00000573990 NGDNQ8NEJ9 315 aaKnown RBP27.86■■■□□ 2.05
SPNS2-207ENST00000573990 SBNO1A3KN83 1393 aa27.86■■■□□ 2.05
SPNS2-207ENST00000573990 ATP7BP35670 1465 aa27.85■■■□□ 2.05
SPNS2-207ENST00000573990 RXRBP28702 533 aa27.85■■■□□ 2.05
SPNS2-207ENST00000573990 QTRT2Q9H974 415 aaKnown RBP27.85■■■□□ 2.05
SPNS2-207ENST00000573990 ROCK2O75116 1388 aaKnown RBP27.85■■■□□ 2.05
SPNS2-207ENST00000573990 USP21Q9UK80 565 aa27.82■■■□□ 2.04
SPNS2-207ENST00000573990 GPRASP1Q5JY77 1395 aa27.82■■■□□ 2.04
SPNS2-207ENST00000573990 FNBP4Q8N3X1 1017 aaPredicted RBP27.81■■■□□ 2.04
SPNS2-207ENST00000573990 CABP2Q9NPB3 220 aa27.81■■■□□ 2.04
SPNS2-207ENST00000573990 QRICH2Q9H0J4 1663 aa27.8■■■□□ 2.04
SPNS2-207ENST00000573990 TRPM3Q9HCF6 1732 aaPredicted RBP27.79■■■□□ 2.04
SPNS2-207ENST00000573990 SRPK2P78362 688 aaKnown RBP27.79■■■□□ 2.04
SPNS2-207ENST00000573990 HAP1P54257 671 aaPredicted RBP27.78■■■□□ 2.04
SPNS2-207ENST00000573990 CCDC61Q9Y6R9 512 aa27.78■■■□□ 2.04
SPNS2-207ENST00000573990 MARF1Q9Y4F3 1742 aaKnown RBP27.78■■■□□ 2.04
SPNS2-207ENST00000573990 ARHGEF10O15013 1369 aa27.77■■■□□ 2.04
SPNS2-207ENST00000573990 PAK3O75914 559 aaPredicted RBP27.77■■■□□ 2.04
SPNS2-207ENST00000573990 ITSN1Q15811 1721 aa27.77■■■□□ 2.04
SPNS2-207ENST00000573990 ACEP12821 1306 aa27.75■■■□□ 2.03
SPNS2-207ENST00000573990 RBM6P78332 1123 aaKnown RBP27.75■■■□□ 2.03
SPNS2-207ENST00000573990 TOPAZ1Q8N9V7 1692 aa27.75■■■□□ 2.03
SPNS2-207ENST00000573990 PLEKHG3A1L390 1219 aa27.74■■■□□ 2.03
SPNS2-207ENST00000573990 BCL9LQ86UU0 1499 aa27.73■■■□□ 2.03
SPNS2-207ENST00000573990 ALS2Q96Q42 1657 aa27.72■■■□□ 2.03
SPNS2-207ENST00000573990 CARD11Q9BXL7 1154 aa27.72■■■□□ 2.03
SPNS2-207ENST00000573990 TRPC5Q9UL62 973 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms