RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 DDX17Q92841 729 aaKnown RBP25.58■■□□□ 1.69
SMG6-212ENST00000573153 CFAP70Q5T0N1 1121 aa25.56■■□□□ 1.68
SMG6-212ENST00000573153 WAPLQ7Z5K2 1190 aa25.56■■□□□ 1.68
SMG6-212ENST00000573153 SPATA31A6Q5VVP1 1343 aa25.55■■□□□ 1.68
SMG6-212ENST00000573153 POTEAQ6S8J7 498 aa25.54■■□□□ 1.68
SMG6-212ENST00000573153 ORAI2Q96SN7 254 aa25.54■■□□□ 1.68
SMG6-212ENST00000573153 STK26Q9P289 416 aa25.53■■□□□ 1.68
SMG6-212ENST00000573153 FMN2Q9NZ56 1722 aa25.53■■□□□ 1.68
SMG6-212ENST00000573153 DLC1Q96QB1 1528 aa25.52■■□□□ 1.68
SMG6-212ENST00000573153 SIRT1Q96EB6 747 aa25.51■■□□□ 1.67
SMG6-212ENST00000573153 SOS2Q07890 1332 aaPredicted RBP25.51■■□□□ 1.67
SMG6-212ENST00000573153 PNPLA6Q8IY17 1366 aa25.51■■□□□ 1.67
SMG6-212ENST00000573153 PXDNQ92626 1479 aa25.47■■□□□ 1.67
SMG6-212ENST00000573153 ADGRB2O60241 1585 aa25.44■■□□□ 1.66
SMG6-212ENST00000573153 COL22A1Q8NFW1 1626 aaPredicted RBP25.44■■□□□ 1.66
SMG6-212ENST00000573153 LRRC59Q96AG4 307 aaKnown RBP25.43■■□□□ 1.66
SMG6-212ENST00000573153 USP32Q8NFA0 1604 aa25.42■■□□□ 1.66
SMG6-212ENST00000573153 DCAF11Q8TEB1 546 aa25.42■■□□□ 1.66
SMG6-212ENST00000573153 RGPD8O14715 1765 aaPredicted RBP25.39■■□□□ 1.65
SMG6-212ENST00000573153 PRAM1Q96QH2 718 aa25.38■■□□□ 1.65
SMG6-212ENST00000573153 KDM2AQ9Y2K7 1162 aa25.38■■□□□ 1.65
SMG6-212ENST00000573153 KIF1AQ12756 1690 aa25.37■■□□□ 1.65
SMG6-212ENST00000573153 STAC3Q96MF2 364 aa25.37■■□□□ 1.65
SMG6-212ENST00000573153 ARHGEF28Q8N1W1 1705 aaKnown RBP25.37■■□□□ 1.65
SMG6-212ENST00000573153 NUTM2FA1L443 756 aa25.36■■□□□ 1.65
SMG6-212ENST00000573153 ESCO1Q5FWF5 840 aa25.36■■□□□ 1.65
SMG6-212ENST00000573153 KIAA1210Q9ULL0 1709 aa25.34■■□□□ 1.65
SMG6-212ENST00000573153 NPHP3Q7Z494 1330 aa25.34■■□□□ 1.65
SMG6-212ENST00000573153 NUTM2BA6NNL0 878 aaPredicted RBP25.33■■□□□ 1.65
SMG6-212ENST00000573153 NUTM2EB1AL46 878 aaPredicted RBP25.33■■□□□ 1.65
SMG6-212ENST00000573153 NUTM2AQ8IVF1 878 aaPredicted RBP25.33■■□□□ 1.65
SMG6-212ENST00000573153 FOXO3O43524 673 aa25.32■■□□□ 1.64
SMG6-212ENST00000573153 SAFB2Q14151 953 aaKnown RBP eCLIP25.3■■□□□ 1.64
SMG6-212ENST00000573153 TRAK1Q9UPV9 953 aa25.3■■□□□ 1.64
SMG6-212ENST00000573153 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
SMG6-212ENST00000573153 XPCQ01831 940 aaPredicted RBP25.29■■□□□ 1.64
SMG6-212ENST00000573153 MEX3CQ5U5Q3 659 aaKnown RBP25.29■■□□□ 1.64
SMG6-212ENST00000573153 AFF2P51816 1311 aa25.28■■□□□ 1.64
SMG6-212ENST00000573153 PRR36Q9H6K5 1346 aa25.28■■□□□ 1.64
SMG6-212ENST00000573153 ZNF772Q68DY9 489 aaPredicted RBP25.26■■□□□ 1.63
SMG6-212ENST00000573153 TULP4Q9NRJ4 1543 aa25.26■■□□□ 1.63
SMG6-212ENST00000573153 MARF1Q9Y4F3 1742 aaKnown RBP25.23■■□□□ 1.63
SMG6-212ENST00000573153 SPATA31A3Q5VYP0 1347 aa25.23■■□□□ 1.63
SMG6-212ENST00000573153 POGKQ9P215 609 aa25.23■■□□□ 1.63
SMG6-212ENST00000573153 TRPM3Q9HCF6 1732 aaPredicted RBP25.23■■□□□ 1.63
SMG6-212ENST00000573153 HIRIP3Q9BW71 556 aaPredicted RBP25.22■■□□□ 1.63
SMG6-212ENST00000573153 PHF8Q9UPP1 1060 aa25.22■■□□□ 1.63
SMG6-212ENST00000573153 ATP7BP35670 1465 aa25.21■■□□□ 1.63
SMG6-212ENST00000573153 CDK12Q9NYV4 1490 aaPredicted RBP25.21■■□□□ 1.63
SMG6-212ENST00000573153 MINK1Q8N4C8 1332 aaPredicted RBP25.21■■□□□ 1.63
SMG6-212ENST00000573153 NBPF1Q3BBV0 1214 aa25.21■■□□□ 1.63
SMG6-212ENST00000573153 C8orf37Q96NL8 207 aa25.21■■□□□ 1.63
SMG6-212ENST00000573153 ADAMTS2O95450 1211 aa25.2■■□□□ 1.62
SMG6-212ENST00000573153 SIN3AQ96ST3 1273 aa25.2■■□□□ 1.62
SMG6-212ENST00000573153 ABCA3Q99758 1704 aa25.2■■□□□ 1.62
SMG6-212ENST00000573153 TNS3Q68CZ2 1445 aa25.2■■□□□ 1.62
SMG6-212ENST00000573153 WASLO00401 505 aaPredicted RBP25.18■■□□□ 1.62
SMG6-212ENST00000573153 KRT28Q7Z3Y7 464 aa25.18■■□□□ 1.62
SMG6-212ENST00000573153 L3MBTL2Q969R5 705 aa25.18■■□□□ 1.62
SMG6-212ENST00000573153 SBNO1A3KN83 1393 aa25.18■■□□□ 1.62
SMG6-212ENST00000573153 FNBP4Q8N3X1 1017 aaPredicted RBP25.17■■□□□ 1.62
SMG6-212ENST00000573153 TOPAZ1Q8N9V7 1692 aa25.17■■□□□ 1.62
SMG6-212ENST00000573153 RGS12O14924 1447 aa25.16■■□□□ 1.62
SMG6-212ENST00000573153 ALS2Q96Q42 1657 aa25.16■■□□□ 1.62
SMG6-212ENST00000573153 TRPM1Q7Z4N2 1603 aa25.15■■□□□ 1.62
SMG6-212ENST00000573153 BCL9LQ86UU0 1499 aa25.15■■□□□ 1.62
SMG6-212ENST00000573153 ATRNO75882 1429 aa25.14■■□□□ 1.62
SMG6-212ENST00000573153 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
SMG6-212ENST00000573153 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
SMG6-212ENST00000573153 CRYBG1Q9Y4K1 1723 aa25.12■■□□□ 1.61
SMG6-212ENST00000573153 RXRBP28702 533 aa25.12■■□□□ 1.61
SMG6-212ENST00000573153 SLIT2O94813 1529 aa25.12■■□□□ 1.61
SMG6-212ENST00000573153 NGLY1Q96IV0 654 aa25.11■■□□□ 1.61
SMG6-212ENST00000573153 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.11■■□□□ 1.61
SMG6-212ENST00000573153 ITSN1Q15811 1721 aa25.1■■□□□ 1.61
SMG6-212ENST00000573153 QTRT2Q9H974 415 aaKnown RBP25.1■■□□□ 1.61
SMG6-212ENST00000573153 RBM6P78332 1123 aaKnown RBP25.07■■□□□ 1.6
SMG6-212ENST00000573153 USP21Q9UK80 565 aa25.07■■□□□ 1.6
SMG6-212ENST00000573153 QRICH2Q9H0J4 1663 aa25.05■■□□□ 1.6
SMG6-212ENST00000573153 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
SMG6-212ENST00000573153 PSME1Q06323 249 aa25.04■■□□□ 1.6
SMG6-212ENST00000573153 CABLES1Q8TDN4 633 aa25.04■■□□□ 1.6
SMG6-212ENST00000573153 NUDT16Q96DE0 195 aaKnown RBP25.04■■□□□ 1.6
SMG6-212ENST00000573153 CDK19Q9BWU1 502 aa25.04■■□□□ 1.6
SMG6-212ENST00000573153 POLR3AO14802 1390 aaPredicted RBP25.04■■□□□ 1.6
SMG6-212ENST00000573153 PLCH1Q4KWH8 1693 aa25.04■■□□□ 1.6
SMG6-212ENST00000573153 GLI3P10071 1580 aa25.03■■□□□ 1.6
SMG6-212ENST00000573153 NBPF8Q3BBV2 869 aa25.02■■□□□ 1.6
SMG6-212ENST00000573153 TRPC5Q9UL62 973 aaPredicted RBP25.02■■□□□ 1.6
SMG6-212ENST00000573153 GPRASP1Q5JY77 1395 aa25.02■■□□□ 1.6
SMG6-212ENST00000573153 CENPJQ9HC77 1338 aaPredicted RBP25.01■■□□□ 1.59
SMG6-212ENST00000573153 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
SMG6-212ENST00000573153 NEUROD1Q13562 356 aa25■■□□□ 1.59
SMG6-212ENST00000573153 UPF1Q92900 1129 aaKnown RBP eCLIP25■■□□□ 1.59
SMG6-212ENST00000573153 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
SMG6-212ENST00000573153 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
SMG6-212ENST00000573153 PLEKHG3A1L390 1219 aa24.97■■□□□ 1.59
SMG6-212ENST00000573153 PHRF1Q9P1Y6 1649 aaKnown RBP24.96■■□□□ 1.59
SMG6-212ENST00000573153 RALGAPBQ86X10 1494 aa24.96■■□□□ 1.59
SMG6-212ENST00000573153 CCDC61Q9Y6R9 512 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms