RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 DLC1Q96QB1 1528 aa23.53■■□□□ 1.36
NDE1-205ENST00000572756 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
NDE1-205ENST00000572756 JCADQ9P266 1359 aa23.52■■□□□ 1.36
NDE1-205ENST00000572756 ILDR2Q71H61 639 aa23.5■■□□□ 1.35
NDE1-205ENST00000572756 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
NDE1-205ENST00000572756 FMN2Q9NZ56 1722 aa23.47■■□□□ 1.35
NDE1-205ENST00000572756 KIAA1210Q9ULL0 1709 aa23.47■■□□□ 1.35
NDE1-205ENST00000572756 ORAI2Q96SN7 254 aa23.45■■□□□ 1.34
NDE1-205ENST00000572756 DDX17Q92841 729 aaKnown RBP23.43■■□□□ 1.34
NDE1-205ENST00000572756 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
NDE1-205ENST00000572756 SIN3AQ96ST3 1273 aa23.42■■□□□ 1.34
NDE1-205ENST00000572756 ADGRB2O60241 1585 aa23.42■■□□□ 1.34
NDE1-205ENST00000572756 ARHGEF28Q8N1W1 1705 aaKnown RBP23.42■■□□□ 1.34
NDE1-205ENST00000572756 TRAK1Q9UPV9 953 aa23.41■■□□□ 1.34
NDE1-205ENST00000572756 SPATA31A6Q5VVP1 1343 aa23.4■■□□□ 1.34
NDE1-205ENST00000572756 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
NDE1-205ENST00000572756 LRP6O75581 1613 aa23.39■■□□□ 1.33
NDE1-205ENST00000572756 RGPD8O14715 1765 aaPredicted RBP23.39■■□□□ 1.33
NDE1-205ENST00000572756 SOS2Q07890 1332 aaPredicted RBP23.38■■□□□ 1.33
NDE1-205ENST00000572756 SAFB2Q14151 953 aaKnown RBP eCLIP23.38■■□□□ 1.33
NDE1-205ENST00000572756 L3MBTL2Q969R5 705 aa23.38■■□□□ 1.33
NDE1-205ENST00000572756 RGS17Q9UGC6 210 aaPredicted RBP23.38■■□□□ 1.33
NDE1-205ENST00000572756 LRRC59Q96AG4 307 aaKnown RBP23.37■■□□□ 1.33
NDE1-205ENST00000572756 POGKQ9P215 609 aa23.37■■□□□ 1.33
NDE1-205ENST00000572756 NUTM2FA1L443 756 aa23.36■■□□□ 1.33
NDE1-205ENST00000572756 ESCO1Q5FWF5 840 aa23.36■■□□□ 1.33
NDE1-205ENST00000572756 KIF1AQ12756 1690 aa23.35■■□□□ 1.33
NDE1-205ENST00000572756 PNPLA6Q8IY17 1366 aa23.35■■□□□ 1.33
NDE1-205ENST00000572756 USP32Q8NFA0 1604 aa23.34■■□□□ 1.33
NDE1-205ENST00000572756 PXDNQ92626 1479 aa23.34■■□□□ 1.33
NDE1-205ENST00000572756 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
NDE1-205ENST00000572756 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
NDE1-205ENST00000572756 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.32
NDE1-205ENST00000572756 ANKARQ7Z5J8 1434 aa23.31■■□□□ 1.32
NDE1-205ENST00000572756 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
NDE1-205ENST00000572756 MINK1Q8N4C8 1332 aaPredicted RBP23.3■■□□□ 1.32
NDE1-205ENST00000572756 FOXO3O43524 673 aa23.29■■□□□ 1.32
NDE1-205ENST00000572756 COL22A1Q8NFW1 1626 aaPredicted RBP23.29■■□□□ 1.32
NDE1-205ENST00000572756 HIRIP3Q9BW71 556 aaPredicted RBP23.28■■□□□ 1.32
NDE1-205ENST00000572756 TULP4Q9NRJ4 1543 aa23.27■■□□□ 1.32
NDE1-205ENST00000572756 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
NDE1-205ENST00000572756 PHF8Q9UPP1 1060 aa23.25■■□□□ 1.31
NDE1-205ENST00000572756 EIF3AQ14152 1382 aaKnown RBP23.25■■□□□ 1.31
NDE1-205ENST00000572756 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
NDE1-205ENST00000572756 NUTM2EB1AL46 878 aaPredicted RBP23.24■■□□□ 1.31
NDE1-205ENST00000572756 SOCS7O14512 581 aa23.24■■□□□ 1.31
NDE1-205ENST00000572756 XPCQ01831 940 aaPredicted RBP23.24■■□□□ 1.31
NDE1-205ENST00000572756 POTEAQ6S8J7 498 aa23.24■■□□□ 1.31
NDE1-205ENST00000572756 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
NDE1-205ENST00000572756 PRR36Q9H6K5 1346 aa23.23■■□□□ 1.31
NDE1-205ENST00000572756 MEX3CQ5U5Q3 659 aaKnown RBP23.22■■□□□ 1.31
NDE1-205ENST00000572756 ATP7BP35670 1465 aa23.2■■□□□ 1.3
NDE1-205ENST00000572756 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
NDE1-205ENST00000572756 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
NDE1-205ENST00000572756 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
NDE1-205ENST00000572756 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
NDE1-205ENST00000572756 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
NDE1-205ENST00000572756 TOPAZ1Q8N9V7 1692 aa23.17■■□□□ 1.3
NDE1-205ENST00000572756 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
NDE1-205ENST00000572756 TONSLQ96HA7 1378 aa23.16■■□□□ 1.3
NDE1-205ENST00000572756 CENPJQ9HC77 1338 aaPredicted RBP23.16■■□□□ 1.3
NDE1-205ENST00000572756 PMFBP1Q8TBY8 1022 aa23.16■■□□□ 1.3
NDE1-205ENST00000572756 TNS3Q68CZ2 1445 aa23.16■■□□□ 1.3
NDE1-205ENST00000572756 SBNO1A3KN83 1393 aa23.15■■□□□ 1.3
NDE1-205ENST00000572756 ROCK2O75116 1388 aaKnown RBP23.15■■□□□ 1.3
NDE1-205ENST00000572756 GPRASP1Q5JY77 1395 aa23.15■■□□□ 1.3
NDE1-205ENST00000572756 MARF1Q9Y4F3 1742 aaKnown RBP23.15■■□□□ 1.3
NDE1-205ENST00000572756 ZNF772Q68DY9 489 aaPredicted RBP23.14■■□□□ 1.29
NDE1-205ENST00000572756 CDK19Q9BWU1 502 aa23.14■■□□□ 1.29
NDE1-205ENST00000572756 AFF2P51816 1311 aa23.13■■□□□ 1.29
NDE1-205ENST00000572756 PSME1Q06323 249 aa23.13■■□□□ 1.29
NDE1-205ENST00000572756 NUDT16Q96DE0 195 aaKnown RBP23.13■■□□□ 1.29
NDE1-205ENST00000572756 ADAMTS2O95450 1211 aa23.12■■□□□ 1.29
NDE1-205ENST00000572756 C8orf37Q96NL8 207 aa23.12■■□□□ 1.29
NDE1-205ENST00000572756 ALS2Q96Q42 1657 aa23.11■■□□□ 1.29
NDE1-205ENST00000572756 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
NDE1-205ENST00000572756 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
NDE1-205ENST00000572756 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
NDE1-205ENST00000572756 ARHGEF10O15013 1369 aa23.08■■□□□ 1.29
NDE1-205ENST00000572756 CCDC61Q9Y6R9 512 aa23.07■■□□□ 1.28
NDE1-205ENST00000572756 POLR3AO14802 1390 aaPredicted RBP23.06■■□□□ 1.28
NDE1-205ENST00000572756 NGLY1Q96IV0 654 aa23.06■■□□□ 1.28
NDE1-205ENST00000572756 FNBP4Q8N3X1 1017 aaPredicted RBP23.05■■□□□ 1.28
NDE1-205ENST00000572756 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
NDE1-205ENST00000572756 PLEKHG3A1L390 1219 aa23.04■■□□□ 1.28
NDE1-205ENST00000572756 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
NDE1-205ENST00000572756 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
NDE1-205ENST00000572756 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
NDE1-205ENST00000572756 CLSPNQ9HAW4 1339 aa23.02■■□□□ 1.28
NDE1-205ENST00000572756 CARD11Q9BXL7 1154 aa23.01■■□□□ 1.27
NDE1-205ENST00000572756 ACEP12821 1306 aa23.01■■□□□ 1.27
NDE1-205ENST00000572756 SBNO2Q9Y2G9 1366 aa23.01■■□□□ 1.27
NDE1-205ENST00000572756 PPIP5K1Q6PFW1 1433 aa23■■□□□ 1.27
NDE1-205ENST00000572756 CDK12Q9NYV4 1490 aaPredicted RBP23■■□□□ 1.27
NDE1-205ENST00000572756 RXRBP28702 533 aa23■■□□□ 1.27
NDE1-205ENST00000572756 LMOD2Q6P5Q4 547 aa23■■□□□ 1.27
NDE1-205ENST00000572756 CABLES1Q8TDN4 633 aa23■■□□□ 1.27
NDE1-205ENST00000572756 QTRT2Q9H974 415 aaKnown RBP23■■□□□ 1.27
NDE1-205ENST00000572756 EVC2Q86UK5 1308 aa23■■□□□ 1.27
NDE1-205ENST00000572756 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms