RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 ARHGEF28Q8N1W1 1705 aaKnown RBP17.05■□□□□ 0.32
TRIM25-205ENST00000572021 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
TRIM25-205ENST00000572021 ROBO1Q9Y6N7 1651 aa17.05■□□□□ 0.32
TRIM25-205ENST00000572021 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
TRIM25-205ENST00000572021 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
TRIM25-205ENST00000572021 DLC1Q96QB1 1528 aa17.04■□□□□ 0.32
TRIM25-205ENST00000572021 DCCP43146 1447 aa17.03■□□□□ 0.32
TRIM25-205ENST00000572021 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
TRIM25-205ENST00000572021 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
TRIM25-205ENST00000572021 HSPA1LP34931 641 aa17.02■□□□□ 0.32
TRIM25-205ENST00000572021 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
TRIM25-205ENST00000572021 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
TRIM25-205ENST00000572021 MST1RQ04912 1400 aa17.02■□□□□ 0.32
TRIM25-205ENST00000572021 MINK1Q8N4C8 1332 aaPredicted RBP17.01■□□□□ 0.31
TRIM25-205ENST00000572021 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
TRIM25-205ENST00000572021 C1orf167Q5SNV9 1468 aa16.98■□□□□ 0.31
TRIM25-205ENST00000572021 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
TRIM25-205ENST00000572021 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
TRIM25-205ENST00000572021 FMN2Q9NZ56 1722 aa16.97■□□□□ 0.31
TRIM25-205ENST00000572021 RGPD8O14715 1765 aaPredicted RBP16.96■□□□□ 0.31
TRIM25-205ENST00000572021 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
TRIM25-205ENST00000572021 ORAI2Q96SN7 254 aa16.96■□□□□ 0.31
TRIM25-205ENST00000572021 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
TRIM25-205ENST00000572021 QRICH2Q9H0J4 1663 aa16.95■□□□□ 0.3
TRIM25-205ENST00000572021 PHLPP1O60346 1717 aa16.95■□□□□ 0.3
TRIM25-205ENST00000572021 GPRASP1Q5JY77 1395 aa16.94■□□□□ 0.3
TRIM25-205ENST00000572021 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
TRIM25-205ENST00000572021 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
TRIM25-205ENST00000572021 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
TRIM25-205ENST00000572021 TIMELESSQ9UNS1 1208 aa16.93■□□□□ 0.3
TRIM25-205ENST00000572021 USP32Q8NFA0 1604 aa16.91■□□□□ 0.3
TRIM25-205ENST00000572021 WASLO00401 505 aaPredicted RBP16.9■□□□□ 0.3
TRIM25-205ENST00000572021 NHSL1Q5SYE7 1610 aa16.9■□□□□ 0.3
TRIM25-205ENST00000572021 AHDC1Q5TGY3 1603 aaPredicted RBP16.89■□□□□ 0.29
TRIM25-205ENST00000572021 PRR36Q9H6K5 1346 aa16.89■□□□□ 0.29
TRIM25-205ENST00000572021 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
TRIM25-205ENST00000572021 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
TRIM25-205ENST00000572021 EIF3AQ14152 1382 aaKnown RBP16.87■□□□□ 0.29
TRIM25-205ENST00000572021 XPCQ01831 940 aaPredicted RBP16.87■□□□□ 0.29
TRIM25-205ENST00000572021 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
TRIM25-205ENST00000572021 FOXO3O43524 673 aa16.86■□□□□ 0.29
TRIM25-205ENST00000572021 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
TRIM25-205ENST00000572021 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
TRIM25-205ENST00000572021 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
TRIM25-205ENST00000572021 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
TRIM25-205ENST00000572021 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
TRIM25-205ENST00000572021 NUDT16Q96DE0 195 aaKnown RBP16.84■□□□□ 0.29
TRIM25-205ENST00000572021 ATP7BP35670 1465 aa16.84■□□□□ 0.29
TRIM25-205ENST00000572021 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
TRIM25-205ENST00000572021 KIF1AQ12756 1690 aa16.83■□□□□ 0.28
TRIM25-205ENST00000572021 USP47Q96K76 1375 aa16.81■□□□□ 0.28
TRIM25-205ENST00000572021 ITSN1Q15811 1721 aa16.81■□□□□ 0.28
TRIM25-205ENST00000572021 NPHP3Q7Z494 1330 aa16.8■□□□□ 0.28
TRIM25-205ENST00000572021 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
TRIM25-205ENST00000572021 PXDNQ92626 1479 aa16.8■□□□□ 0.28
TRIM25-205ENST00000572021 TOPAZ1Q8N9V7 1692 aa16.8■□□□□ 0.28
TRIM25-205ENST00000572021 SOS2Q07890 1332 aaPredicted RBP16.79■□□□□ 0.28
TRIM25-205ENST00000572021 JCADQ9P266 1359 aa16.78■□□□□ 0.28
TRIM25-205ENST00000572021 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
TRIM25-205ENST00000572021 PSME1Q06323 249 aa16.77■□□□□ 0.28
TRIM25-205ENST00000572021 NGDNQ8NEJ9 315 aaKnown RBP16.77■□□□□ 0.28
TRIM25-205ENST00000572021 LRRC59Q96AG4 307 aaKnown RBP16.77■□□□□ 0.28
TRIM25-205ENST00000572021 TESK2Q96S53 571 aa16.77■□□□□ 0.28
TRIM25-205ENST00000572021 SHPRHQ149N8 1683 aa16.77■□□□□ 0.27
TRIM25-205ENST00000572021 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.27
TRIM25-205ENST00000572021 MED1Q15648 1581 aaPredicted RBP16.76■□□□□ 0.27
TRIM25-205ENST00000572021 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
TRIM25-205ENST00000572021 PPIP5K1Q6PFW1 1433 aa16.76■□□□□ 0.27
TRIM25-205ENST00000572021 NUTM2BA6NNL0 878 aaPredicted RBP16.75■□□□□ 0.27
TRIM25-205ENST00000572021 NUTM2EB1AL46 878 aaPredicted RBP16.75■□□□□ 0.27
TRIM25-205ENST00000572021 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
TRIM25-205ENST00000572021 NUTM2AQ8IVF1 878 aaPredicted RBP16.75■□□□□ 0.27
TRIM25-205ENST00000572021 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
TRIM25-205ENST00000572021 CABP1Q9NZU7 370 aa16.74■□□□□ 0.27
TRIM25-205ENST00000572021 ACEP12821 1306 aa16.74■□□□□ 0.27
TRIM25-205ENST00000572021 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
TRIM25-205ENST00000572021 DISP3Q9P2K9 1392 aa16.72■□□□□ 0.27
TRIM25-205ENST00000572021 LRP6O75581 1613 aa16.72■□□□□ 0.27
TRIM25-205ENST00000572021 TRPM3Q9HCF6 1732 aaPredicted RBP16.72■□□□□ 0.27
TRIM25-205ENST00000572021 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
TRIM25-205ENST00000572021 PLEKHG3A1L390 1219 aa16.72■□□□□ 0.27
TRIM25-205ENST00000572021 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
TRIM25-205ENST00000572021 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
TRIM25-205ENST00000572021 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
TRIM25-205ENST00000572021 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
TRIM25-205ENST00000572021 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
TRIM25-205ENST00000572021 SPATA31A6Q5VVP1 1343 aa16.69■□□□□ 0.26
TRIM25-205ENST00000572021 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.267e-9■■■■■ 43.2
TRIM25-205ENST00000572021 TMC1Q8TDI8 760 aa16.69■□□□□ 0.26
TRIM25-205ENST00000572021 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
TRIM25-205ENST00000572021 COL22A1Q8NFW1 1626 aaPredicted RBP16.68■□□□□ 0.26
TRIM25-205ENST00000572021 TMF1P82094 1093 aa16.68■□□□□ 0.26
TRIM25-205ENST00000572021 CABLES1Q8TDN4 633 aa16.68■□□□□ 0.26
TRIM25-205ENST00000572021 ALS2Q96Q42 1657 aa16.67■□□□□ 0.26
TRIM25-205ENST00000572021 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
TRIM25-205ENST00000572021 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
TRIM25-205ENST00000572021 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
TRIM25-205ENST00000572021 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
TRIM25-205ENST00000572021 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
TRIM25-205ENST00000572021 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms