RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 TRAK1Q9UPV9 953 aa14.88□□□□□ -0.03
GTF3C1-213ENST00000571886 COL16A1Q07092 1604 aaPredicted RBP14.88□□□□□ -0.03
GTF3C1-213ENST00000571886 NUTM2FA1L443 756 aa14.87□□□□□ -0.03
GTF3C1-213ENST00000571886 SAFB2Q14151 953 aaKnown RBP eCLIP14.87□□□□□ -0.03
GTF3C1-213ENST00000571886 ILDR2Q71H61 639 aa14.87□□□□□ -0.03
GTF3C1-213ENST00000571886 L3MBTL2Q969R5 705 aa14.87□□□□□ -0.03
GTF3C1-213ENST00000571886 STAC3Q96MF2 364 aa14.87□□□□□ -0.03
GTF3C1-213ENST00000571886 AHDC1Q5TGY3 1603 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-213ENST00000571886 PRAM1Q96QH2 718 aa14.86□□□□□ -0.03
GTF3C1-213ENST00000571886 NBPF1Q3BBV0 1214 aa14.85□□□□□ -0.03
GTF3C1-213ENST00000571886 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.04
GTF3C1-213ENST00000571886 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
GTF3C1-213ENST00000571886 RGPD8O14715 1765 aaPredicted RBP14.83□□□□□ -0.04
GTF3C1-213ENST00000571886 DLC1Q96QB1 1528 aa14.82□□□□□ -0.04
GTF3C1-213ENST00000571886 POGKQ9P215 609 aa14.82□□□□□ -0.04
GTF3C1-213ENST00000571886 ESCO1Q5FWF5 840 aa14.81□□□□□ -0.04
GTF3C1-213ENST00000571886 JCADQ9P266 1359 aa14.81□□□□□ -0.04
GTF3C1-213ENST00000571886 FMN2Q9NZ56 1722 aa14.8□□□□□ -0.04
GTF3C1-213ENST00000571886 HIRIP3Q9BW71 556 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-213ENST00000571886 RGS17Q9UGC6 210 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-213ENST00000571886 KIAA1210Q9ULL0 1709 aa14.8□□□□□ -0.04
GTF3C1-213ENST00000571886 ARHGEF28Q8N1W1 1705 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-213ENST00000571886 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-213ENST00000571886 NBPF8Q3BBV2 869 aa14.78□□□□□ -0.04
GTF3C1-213ENST00000571886 PCGF6Q9BYE7 350 aa14.78□□□□□ -0.04
GTF3C1-213ENST00000571886 SOS2Q07890 1332 aaPredicted RBP14.77□□□□□ -0.04
GTF3C1-213ENST00000571886 FOXO3O43524 673 aa14.77□□□□□ -0.05
GTF3C1-213ENST00000571886 XPCQ01831 940 aaPredicted RBP14.77□□□□□ -0.05
GTF3C1-213ENST00000571886 SHPRHQ149N8 1683 aa14.77□□□□□ -0.05
GTF3C1-213ENST00000571886 LRP6O75581 1613 aa14.77□□□□□ -0.05
GTF3C1-213ENST00000571886 LRRC59Q96AG4 307 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-213ENST00000571886 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
GTF3C1-213ENST00000571886 USP32Q8NFA0 1604 aa14.76□□□□□ -0.05
GTF3C1-213ENST00000571886 NUTM2BA6NNL0 878 aaPredicted RBP14.75□□□□□ -0.05
GTF3C1-213ENST00000571886 NUTM2EB1AL46 878 aaPredicted RBP14.75□□□□□ -0.05
GTF3C1-213ENST00000571886 NUTM2AQ8IVF1 878 aaPredicted RBP14.75□□□□□ -0.05
GTF3C1-213ENST00000571886 PRR36Q9H6K5 1346 aa14.74□□□□□ -0.05
GTF3C1-213ENST00000571886 TRPM1Q7Z4N2 1603 aa14.74□□□□□ -0.05
GTF3C1-213ENST00000571886 PNPLA6Q8IY17 1366 aa14.73□□□□□ -0.05
GTF3C1-213ENST00000571886 ADGRB2O60241 1585 aa14.73□□□□□ -0.05
GTF3C1-213ENST00000571886 SPATA31A6Q5VVP1 1343 aa14.73□□□□□ -0.05
GTF3C1-213ENST00000571886 WASLO00401 505 aaPredicted RBP14.73□□□□□ -0.05
GTF3C1-213ENST00000571886 PXDNQ92626 1479 aa14.73□□□□□ -0.05
GTF3C1-213ENST00000571886 PMFBP1Q8TBY8 1022 aa14.72□□□□□ -0.05
GTF3C1-213ENST00000571886 PHF8Q9UPP1 1060 aa14.72□□□□□ -0.05
GTF3C1-213ENST00000571886 NPHP3Q7Z494 1330 aa14.71□□□□□ -0.05
GTF3C1-213ENST00000571886 POTEAQ6S8J7 498 aa14.71□□□□□ -0.05
GTF3C1-213ENST00000571886 KRT28Q7Z3Y7 464 aa14.7□□□□□ -0.06
GTF3C1-213ENST00000571886 CDK19Q9BWU1 502 aa14.69□□□□□ -0.06
GTF3C1-213ENST00000571886 TONSLQ96HA7 1378 aa14.69□□□□□ -0.06
GTF3C1-213ENST00000571886 KIF1AQ12756 1690 aa14.68□□□□□ -0.06
GTF3C1-213ENST00000571886 ANKARQ7Z5J8 1434 aa14.68□□□□□ -0.06
GTF3C1-213ENST00000571886 TULP4Q9NRJ4 1543 aa14.68□□□□□ -0.06
GTF3C1-213ENST00000571886 MEX3CQ5U5Q3 659 aaKnown RBP14.68□□□□□ -0.06
GTF3C1-213ENST00000571886 CENPJQ9HC77 1338 aaPredicted RBP14.67□□□□□ -0.06
GTF3C1-213ENST00000571886 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-213ENST00000571886 ROCK2O75116 1388 aaKnown RBP14.67□□□□□ -0.06
GTF3C1-213ENST00000571886 SPATA31A3Q5VYP0 1347 aa14.66□□□□□ -0.06
GTF3C1-213ENST00000571886 ADAMTS2O95450 1211 aa14.66□□□□□ -0.06
GTF3C1-213ENST00000571886 QRICH2Q9H0J4 1663 aa14.65□□□□□ -0.06
GTF3C1-213ENST00000571886 ATP7BP35670 1465 aa14.65□□□□□ -0.06
GTF3C1-213ENST00000571886 PSME1Q06323 249 aa14.65□□□□□ -0.06
GTF3C1-213ENST00000571886 COL22A1Q8NFW1 1626 aaPredicted RBP14.65□□□□□ -0.06
GTF3C1-213ENST00000571886 GPRASP1Q5JY77 1395 aa14.63□□□□□ -0.07
GTF3C1-213ENST00000571886 C8orf37Q96NL8 207 aa14.63□□□□□ -0.07
GTF3C1-213ENST00000571886 CABP2Q9NPB3 220 aa14.63□□□□□ -0.07
GTF3C1-213ENST00000571886 AFF2P51816 1311 aa14.63□□□□□ -0.07
GTF3C1-213ENST00000571886 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
GTF3C1-213ENST00000571886 SOCS7O14512 581 aa14.62□□□□□ -0.07
GTF3C1-213ENST00000571886 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
GTF3C1-213ENST00000571886 CABLES1Q8TDN4 633 aa14.62□□□□□ -0.07
GTF3C1-213ENST00000571886 TRPM3Q9HCF6 1732 aaPredicted RBP14.62□□□□□ -0.07
GTF3C1-213ENST00000571886 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
GTF3C1-213ENST00000571886 CARD11Q9BXL7 1154 aa14.61□□□□□ -0.07
GTF3C1-213ENST00000571886 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 TNS3Q68CZ2 1445 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 LMOD2Q6P5Q4 547 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 RALGAPBQ86X10 1494 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 TOPAZ1Q8N9V7 1692 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 ITSN1Q15811 1721 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 ACEP12821 1306 aa14.6□□□□□ -0.07
GTF3C1-213ENST00000571886 PLEKHG3A1L390 1219 aa14.59□□□□□ -0.07
GTF3C1-213ENST00000571886 NGLY1Q96IV0 654 aa14.59□□□□□ -0.07
GTF3C1-213ENST00000571886 ZNF772Q68DY9 489 aaPredicted RBP14.58□□□□□ -0.08
GTF3C1-213ENST00000571886 ALS2Q96Q42 1657 aa14.58□□□□□ -0.08
GTF3C1-213ENST00000571886 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-213ENST00000571886 POLR3AO14802 1390 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-213ENST00000571886 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
GTF3C1-213ENST00000571886 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
GTF3C1-213ENST00000571886 CABP1Q9NZU7 370 aa14.56□□□□□ -0.08
GTF3C1-213ENST00000571886 EVC2Q86UK5 1308 aa14.56□□□□□ -0.08
GTF3C1-213ENST00000571886 PPIP5K1Q6PFW1 1433 aa14.56□□□□□ -0.08
GTF3C1-213ENST00000571886 FNBP4Q8N3X1 1017 aaPredicted RBP14.55□□□□□ -0.08
GTF3C1-213ENST00000571886 CCER1Q8TC90 406 aaPredicted RBP14.55□□□□□ -0.08
GTF3C1-213ENST00000571886 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
GTF3C1-213ENST00000571886 ABCA3Q99758 1704 aa14.55□□□□□ -0.08
GTF3C1-213ENST00000571886 NUTM2GQ5VZR2 741 aa14.54□□□□□ -0.08
GTF3C1-213ENST00000571886 USP21Q9UK80 565 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms