RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PRAG1Q86YV5 1406 aa20.24■□□□□ 0.83
RPAIN-209ENST00000571558 VGFO15240 615 aaPredicted RBP20.23■□□□□ 0.83
RPAIN-209ENST00000571558 NEXMIFQ5QGS0 1516 aa20.23■□□□□ 0.83
RPAIN-209ENST00000571558 ATRNO75882 1429 aa20.22■□□□□ 0.83
RPAIN-209ENST00000571558 ORAI2Q96SN7 254 aa20.22■□□□□ 0.83
RPAIN-209ENST00000571558 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
RPAIN-209ENST00000571558 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
RPAIN-209ENST00000571558 EP400Q96L91 3159 aa20.19■□□□□ 0.82
RPAIN-209ENST00000571558 NPHP3Q7Z494 1330 aa20.18■□□□□ 0.82
RPAIN-209ENST00000571558 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
RPAIN-209ENST00000571558 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
RPAIN-209ENST00000571558 MYOM2P54296 1465 aa20.16■□□□□ 0.82
RPAIN-209ENST00000571558 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
RPAIN-209ENST00000571558 BCL9LQ86UU0 1499 aa20.15■□□□□ 0.82
RPAIN-209ENST00000571558 GJD4Q96KN9 370 aaPredicted RBP20.14■□□□□ 0.81
RPAIN-209ENST00000571558 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
RPAIN-209ENST00000571558 LRPPRCP42704 1394 aaKnown RBP20.13■□□□□ 0.81
RPAIN-209ENST00000571558 KIF1BO60333 1816 aa20.12■□□□□ 0.81
RPAIN-209ENST00000571558 ESCO1Q5FWF5 840 aa20.11■□□□□ 0.81
RPAIN-209ENST00000571558 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
RPAIN-209ENST00000571558 PXDNQ92626 1479 aa20.09■□□□□ 0.81
RPAIN-209ENST00000571558 CDC42BPGQ6DT37 1551 aa20.09■□□□□ 0.81
RPAIN-209ENST00000571558 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
RPAIN-209ENST00000571558 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.8
RPAIN-209ENST00000571558 FOXO3O43524 673 aa20.07■□□□□ 0.8
RPAIN-209ENST00000571558 UNC5CLQ8IV45 518 aa20.07■□□□□ 0.8
RPAIN-209ENST00000571558 MARF1Q9Y4F3 1742 aaKnown RBP20.06■□□□□ 0.8
RPAIN-209ENST00000571558 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.04■□□□□ 0.8
RPAIN-209ENST00000571558 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
RPAIN-209ENST00000571558 SLIT2O94813 1529 aa20.03■□□□□ 0.8
RPAIN-209ENST00000571558 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.79
RPAIN-209ENST00000571558 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.79
RPAIN-209ENST00000571558 TECPR2O15040 1411 aa20.01■□□□□ 0.79
RPAIN-209ENST00000571558 ANKRD30BQ9BXX2 1392 aa20■□□□□ 0.79
RPAIN-209ENST00000571558 SPATA31A3Q5VYP0 1347 aa20■□□□□ 0.79
RPAIN-209ENST00000571558 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
RPAIN-209ENST00000571558 XPCQ01831 940 aaPredicted RBP19.99■□□□□ 0.79
RPAIN-209ENST00000571558 ONECUT3O60422 494 aaPredicted RBP19.98■□□□□ 0.79
RPAIN-209ENST00000571558 GLI3P10071 1580 aa19.98■□□□□ 0.79
RPAIN-209ENST00000571558 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
RPAIN-209ENST00000571558 PPLO60437 1756 aa19.97■□□□□ 0.79
RPAIN-209ENST00000571558 VPS72Q15906 364 aa19.96■□□□□ 0.79
RPAIN-209ENST00000571558 SEPT12Q8IYM1 358 aa19.95■□□□□ 0.78
RPAIN-209ENST00000571558 DEFB132Q7Z7B7 95 aa19.94■□□□□ 0.78
RPAIN-209ENST00000571558 KIF1AQ12756 1690 aa19.93■□□□□ 0.78
RPAIN-209ENST00000571558 PSME1Q06323 249 aa19.93■□□□□ 0.78
RPAIN-209ENST00000571558 KRT28Q7Z3Y7 464 aa19.93■□□□□ 0.78
RPAIN-209ENST00000571558 WAPLQ7Z5K2 1190 aa19.93■□□□□ 0.78
RPAIN-209ENST00000571558 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
RPAIN-209ENST00000571558 LRP5O75197 1615 aa19.93■□□□□ 0.78
RPAIN-209ENST00000571558 USP32Q8NFA0 1604 aa19.92■□□□□ 0.78
RPAIN-209ENST00000571558 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
RPAIN-209ENST00000571558 HAP1P54257 671 aaPredicted RBP19.92■□□□□ 0.78
RPAIN-209ENST00000571558 KRT27Q7Z3Y8 459 aa19.92■□□□□ 0.78
RPAIN-209ENST00000571558 STK26Q9P289 416 aa19.92■□□□□ 0.78
RPAIN-209ENST00000571558 ADGRF5Q8IZF2 1346 aa19.91■□□□□ 0.78
RPAIN-209ENST00000571558 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
RPAIN-209ENST00000571558 BAG6P46379 1132 aa19.89■□□□□ 0.77
RPAIN-209ENST00000571558 TNS3Q68CZ2 1445 aa19.89■□□□□ 0.77
RPAIN-209ENST00000571558 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
RPAIN-209ENST00000571558 NWD2Q9ULI1 1742 aa19.88■□□□□ 0.77
RPAIN-209ENST00000571558 SBNO1A3KN83 1393 aa19.88■□□□□ 0.77
RPAIN-209ENST00000571558 ARHGEF10O15013 1369 aa19.88■□□□□ 0.77
RPAIN-209ENST00000571558 KNDC1Q76NI1 1749 aa19.87■□□□□ 0.77
RPAIN-209ENST00000571558 PHF8Q9UPP1 1060 aa19.87■□□□□ 0.77
RPAIN-209ENST00000571558 BRWD3Q6RI45 1802 aa19.87■□□□□ 0.77
RPAIN-209ENST00000571558 CCDC9Q9Y3X0 531 aaKnown RBP19.86■□□□□ 0.77
RPAIN-209ENST00000571558 PLEKHH1Q9ULM0 1364 aa19.85■□□□□ 0.77
RPAIN-209ENST00000571558 SPATA31E1Q6ZUB1 1445 aa19.85■□□□□ 0.77
RPAIN-209ENST00000571558 PIK3C2GO75747 1445 aa19.85■□□□□ 0.77
RPAIN-209ENST00000571558 YTHDC2Q9H6S0 1430 aaKnown RBP19.85■□□□□ 0.77
RPAIN-209ENST00000571558 TMEM132EQ6IEE7 984 aa19.85■□□□□ 0.77
RPAIN-209ENST00000571558 RGL3Q3MIN7 710 aa19.83■□□□□ 0.76
RPAIN-209ENST00000571558 CABLES1Q8TDN4 633 aa19.83■□□□□ 0.76
RPAIN-209ENST00000571558 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
RPAIN-209ENST00000571558 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
RPAIN-209ENST00000571558 PLCH1Q4KWH8 1693 aa19.81■□□□□ 0.76
RPAIN-209ENST00000571558 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
RPAIN-209ENST00000571558 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
RPAIN-209ENST00000571558 C14orf93Q9H972 538 aaKnown RBP19.79■□□□□ 0.76
RPAIN-209ENST00000571558 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
RPAIN-209ENST00000571558 A0A0G2JS52 829 aa19.78■□□□□ 0.76
RPAIN-209ENST00000571558 MYT1Q01538 1121 aa19.78■□□□□ 0.76
RPAIN-209ENST00000571558 PSDA5PKW4 1024 aaPredicted RBP19.77■□□□□ 0.76
RPAIN-209ENST00000571558 TIMELESSQ9UNS1 1208 aa19.77■□□□□ 0.76
RPAIN-209ENST00000571558 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.75
RPAIN-209ENST00000571558 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
RPAIN-209ENST00000571558 FAM98CQ17RN3 349 aaKnown RBP19.76■□□□□ 0.75
RPAIN-209ENST00000571558 DISP2A7MBM2 1401 aa19.76■□□□□ 0.75
RPAIN-209ENST00000571558 BTG4Q9NY30 223 aa19.76■□□□□ 0.75
RPAIN-209ENST00000571558 ABCA3Q99758 1704 aa19.75■□□□□ 0.75
RPAIN-209ENST00000571558 EN1Q05925 392 aaPredicted RBP19.73■□□□□ 0.75
RPAIN-209ENST00000571558 TONSLQ96HA7 1378 aa19.72■□□□□ 0.75
RPAIN-209ENST00000571558 RGPD1P0DJD0 1748 aa19.72■□□□□ 0.75
RPAIN-209ENST00000571558 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
RPAIN-209ENST00000571558 RGPD8O14715 1765 aaPredicted RBP19.72■□□□□ 0.75
RPAIN-209ENST00000571558 SPATA31A5Q5VU36 1347 aa19.72■□□□□ 0.75
RPAIN-209ENST00000571558 SPATA31A7Q8IWB4 1347 aa19.72■□□□□ 0.75
RPAIN-209ENST00000571558 GPRASP1Q5JY77 1395 aa19.71■□□□□ 0.75
RPAIN-209ENST00000571558 NRAPQ86VF7 1730 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms