RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
SCARF1-204ENST00000570902 NPHP3Q7Z494 1330 aa28.57■■■□□ 2.16
SCARF1-204ENST00000570902 ATAD2Q6PL18 1390 aa28.57■■■□□ 2.16
SCARF1-204ENST00000570902 CDC42BPGQ6DT37 1551 aa28.56■■■□□ 2.16
SCARF1-204ENST00000570902 ESCO1Q5FWF5 840 aa28.54■■■□□ 2.16
SCARF1-204ENST00000570902 MYOM2P54296 1465 aa28.51■■■□□ 2.15
SCARF1-204ENST00000570902 ATRNO75882 1429 aa28.51■■■□□ 2.15
SCARF1-204ENST00000570902 LRPPRCP42704 1394 aaKnown RBP28.5■■■□□ 2.15
SCARF1-204ENST00000570902 PXDNQ92626 1479 aa28.49■■■□□ 2.15
SCARF1-204ENST00000570902 CCDC144AA2RUR9 1427 aa28.48■■■□□ 2.15
SCARF1-204ENST00000570902 ADGRF5Q8IZF2 1346 aa28.46■■■□□ 2.15
SCARF1-204ENST00000570902 TECPR2O15040 1411 aa28.46■■■□□ 2.15
SCARF1-204ENST00000570902 FOXO3O43524 673 aa28.45■■■□□ 2.14
SCARF1-204ENST00000570902 FOXD1Q16676 465 aa28.45■■■□□ 2.14
SCARF1-204ENST00000570902 ANKRD30BQ9BXX2 1392 aa28.45■■■□□ 2.14
SCARF1-204ENST00000570902 STK26Q9P289 416 aa28.44■■■□□ 2.14
SCARF1-204ENST00000570902 BCL9LQ86UU0 1499 aa28.43■■■□□ 2.14
SCARF1-204ENST00000570902 MARF1Q9Y4F3 1742 aaKnown RBP28.43■■■□□ 2.14
SCARF1-204ENST00000570902 RGL3Q3MIN7 710 aa28.42■■■□□ 2.14
SCARF1-204ENST00000570902 SPATA31E1Q6ZUB1 1445 aa28.42■■■□□ 2.14
SCARF1-204ENST00000570902 ABCC11Q96J66 1382 aa28.41■■■□□ 2.14
SCARF1-204ENST00000570902 XPCQ01831 940 aaPredicted RBP28.41■■■□□ 2.14
SCARF1-204ENST00000570902 WAPLQ7Z5K2 1190 aa28.41■■■□□ 2.14
SCARF1-204ENST00000570902 KNDC1Q76NI1 1749 aa28.39■■■□□ 2.14
SCARF1-204ENST00000570902 IFT172Q9UG01 1749 aa28.38■■■□□ 2.13
SCARF1-204ENST00000570902 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
SCARF1-204ENST00000570902 CCDC125Q86Z20 511 aa28.38■■■□□ 2.13
SCARF1-204ENST00000570902 GJD4Q96KN9 370 aaPredicted RBP28.37■■■□□ 2.13
SCARF1-204ENST00000570902 PIK3C2GO75747 1445 aa28.36■■■□□ 2.13
SCARF1-204ENST00000570902 KIF1AQ12756 1690 aa28.35■■■□□ 2.13
SCARF1-204ENST00000570902 TMEM132EQ6IEE7 984 aa28.35■■■□□ 2.13
SCARF1-204ENST00000570902 PLEKHH1Q9ULM0 1364 aa28.35■■■□□ 2.13
SCARF1-204ENST00000570902 MPHOSPH9Q99550 1183 aa28.34■■■□□ 2.13
SCARF1-204ENST00000570902 ZRANB1Q9UGI0 708 aa28.34■■■□□ 2.13
SCARF1-204ENST00000570902 FMN2Q9NZ56 1722 aa28.34■■■□□ 2.13
SCARF1-204ENST00000570902 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.33■■■□□ 2.13
SCARF1-204ENST00000570902 SPATA31A3Q5VYP0 1347 aa28.33■■■□□ 2.13
SCARF1-204ENST00000570902 YTHDC2Q9H6S0 1430 aaKnown RBP28.33■■■□□ 2.13
SCARF1-204ENST00000570902 EP400Q96L91 3159 aa28.32■■■□□ 2.12
SCARF1-204ENST00000570902 UNC5CLQ8IV45 518 aa28.31■■■□□ 2.12
SCARF1-204ENST00000570902 SIRT1Q96EB6 747 aa28.31■■■□□ 2.12
SCARF1-204ENST00000570902 SRCAPQ6ZRS2 3230 aa28.3■■■□□ 2.12
SCARF1-204ENST00000570902 SLIT2O94813 1529 aa28.29■■■□□ 2.12
SCARF1-204ENST00000570902 KRT28Q7Z3Y7 464 aa28.28■■■□□ 2.12
SCARF1-204ENST00000570902 RALGAPBQ86X10 1494 aa28.27■■■□□ 2.12
SCARF1-204ENST00000570902 USP32Q8NFA0 1604 aa28.25■■■□□ 2.11
SCARF1-204ENST00000570902 ACIN1Q9UKV3 1341 aaKnown RBP28.25■■■□□ 2.11
SCARF1-204ENST00000570902 PSME1Q06323 249 aa28.25■■■□□ 2.11
SCARF1-204ENST00000570902 C14orf93Q9H972 538 aaKnown RBP28.25■■■□□ 2.11
SCARF1-204ENST00000570902 HAP1P54257 671 aaPredicted RBP28.24■■■□□ 2.11
SCARF1-204ENST00000570902 PHF8Q9UPP1 1060 aa28.24■■■□□ 2.11
SCARF1-204ENST00000570902 GLI3P10071 1580 aa28.24■■■□□ 2.11
SCARF1-204ENST00000570902 TNS3Q68CZ2 1445 aa28.23■■■□□ 2.11
SCARF1-204ENST00000570902 DHX57Q6P158 1386 aaKnown RBP28.23■■■□□ 2.11
SCARF1-204ENST00000570902 BLMP54132 1417 aaPredicted RBP28.2■■■□□ 2.11
SCARF1-204ENST00000570902 NRXN1Q9ULB1 1477 aa28.2■■■□□ 2.1
SCARF1-204ENST00000570902 SBNO1A3KN83 1393 aa28.19■■■□□ 2.1
SCARF1-204ENST00000570902 RGPD8O14715 1765 aaPredicted RBP28.17■■■□□ 2.1
SCARF1-204ENST00000570902 ARHGEF10O15013 1369 aa28.17■■■□□ 2.1
SCARF1-204ENST00000570902 CFAP70Q5T0N1 1121 aa28.17■■■□□ 2.1
SCARF1-204ENST00000570902 VPS72Q15906 364 aa28.16■■■□□ 2.1
SCARF1-204ENST00000570902 PRAM1Q96QH2 718 aa28.15■■■□□ 2.1
SCARF1-204ENST00000570902 NWD2Q9ULI1 1742 aa28.15■■■□□ 2.1
SCARF1-204ENST00000570902 SEPT12Q8IYM1 358 aa28.14■■■□□ 2.1
SCARF1-204ENST00000570902 CABLES1Q8TDN4 633 aa28.14■■■□□ 2.1
SCARF1-204ENST00000570902 SF3B2Q13435 895 aaKnown RBP28.13■■■□□ 2.09
SCARF1-204ENST00000570902 LMOD2Q6P5Q4 547 aa28.13■■■□□ 2.09
SCARF1-204ENST00000570902 ANKARQ7Z5J8 1434 aa28.12■■■□□ 2.09
SCARF1-204ENST00000570902 SAFB2Q14151 953 aaKnown RBP eCLIP28.12■■■□□ 2.09
SCARF1-204ENST00000570902 PLCH1Q4KWH8 1693 aa28.12■■■□□ 2.09
SCARF1-204ENST00000570902 DLC1Q96QB1 1528 aa28.12■■■□□ 2.09
SCARF1-204ENST00000570902 BRWD3Q6RI45 1802 aa28.11■■■□□ 2.09
SCARF1-204ENST00000570902 POGKQ9P215 609 aa28.11■■■□□ 2.09
SCARF1-204ENST00000570902 CCDC9Q9Y3X0 531 aaKnown RBP28.11■■■□□ 2.09
SCARF1-204ENST00000570902 ONECUT3O60422 494 aaPredicted RBP28.1■■■□□ 2.09
SCARF1-204ENST00000570902 ABCA3Q99758 1704 aa28.09■■■□□ 2.09
SCARF1-204ENST00000570902 PLEKHG5O94827 1062 aa28.09■■■□□ 2.09
SCARF1-204ENST00000570902 ADGRB2O60241 1585 aa28.07■■■□□ 2.08
SCARF1-204ENST00000570902 KRT27Q7Z3Y8 459 aa28.06■■■□□ 2.08
SCARF1-204ENST00000570902 DEFB132Q7Z7B7 95 aa28.06■■■□□ 2.08
SCARF1-204ENST00000570902 PMFBP1Q8TBY8 1022 aa28.06■■■□□ 2.08
SCARF1-204ENST00000570902 EIF3AQ14152 1382 aaKnown RBP28.04■■■□□ 2.08
SCARF1-204ENST00000570902 FAM83GA6ND36 823 aa28.04■■■□□ 2.08
SCARF1-204ENST00000570902 GPRASP1Q5JY77 1395 aa28.01■■■□□ 2.07
SCARF1-204ENST00000570902 ADGRB1O14514 1584 aa28.01■■■□□ 2.07
SCARF1-204ENST00000570902 A0A0G2JS52 829 aa28■■■□□ 2.07
SCARF1-204ENST00000570902 MYT1Q01538 1121 aa28■■■□□ 2.07
SCARF1-204ENST00000570902 TRPM3Q9HCF6 1732 aaPredicted RBP27.99■■■□□ 2.07
SCARF1-204ENST00000570902 TRAK1Q9UPV9 953 aa27.99■■■□□ 2.07
SCARF1-204ENST00000570902 BTG4Q9NY30 223 aa27.98■■■□□ 2.07
SCARF1-204ENST00000570902 NRAPQ86VF7 1730 aa27.98■■■□□ 2.07
SCARF1-204ENST00000570902 HIRIP3Q9BW71 556 aaPredicted RBP27.97■■■□□ 2.07
SCARF1-204ENST00000570902 COL14A1Q05707 1796 aaKnown RBP27.96■■■□□ 2.07
SCARF1-204ENST00000570902 ALS2Q96Q42 1657 aa27.96■■■□□ 2.07
SCARF1-204ENST00000570902 TULP4Q9NRJ4 1543 aa27.96■■■□□ 2.07
SCARF1-204ENST00000570902 BAG6P46379 1132 aa27.95■■■□□ 2.06
SCARF1-204ENST00000570902 FAM98CQ17RN3 349 aaKnown RBP27.95■■■□□ 2.06
SCARF1-204ENST00000570902 MINK1Q8N4C8 1332 aaPredicted RBP27.94■■■□□ 2.06
SCARF1-204ENST00000570902 WASLO00401 505 aaPredicted RBP27.93■■■□□ 2.06
SCARF1-204ENST00000570902 RAB3GAP2Q9H2M9 1393 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms