RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 WDR7Q9Y4E6 1490 aa4.86□□□□□ -1.63
SMG6-208ENST00000570874 UNC13BO14795 1591 aa4.86□□□□□ -1.63
SMG6-208ENST00000570874 MAP3K4Q9Y6R4 1608 aa4.86□□□□□ -1.63
SMG6-208ENST00000570874 PATL2C9JE40 543 aaKnown RBP4.85□□□□□ -1.63
SMG6-208ENST00000570874 HNRNPMP52272 730 aaKnown RBP eCLIP4.85□□□□□ -1.632e-14■■■■■ 29.9
SMG6-208ENST00000570874 AAMPQ13685 434 aa4.85□□□□□ -1.63
SMG6-208ENST00000570874 IL27Q8NEV9 243 aa4.85□□□□□ -1.63
SMG6-208ENST00000570874 C9orf84Q5VXU9 1444 aa4.85□□□□□ -1.63
SMG6-208ENST00000570874 ASXL2Q76L83 1435 aa4.85□□□□□ -1.63
SMG6-208ENST00000570874 PZPP20742 1482 aa4.85□□□□□ -1.63
SMG6-208ENST00000570874 SHANK2Q9UPX8 1470 aa4.85□□□□□ -1.63
SMG6-208ENST00000570874 INO80Q9ULG1 1556 aaPredicted RBP4.85□□□□□ -1.63
SMG6-208ENST00000570874 POLR1AO95602 1720 aaPredicted RBP4.85□□□□□ -1.63
SMG6-208ENST00000570874 RICTORQ6R327 1708 aa4.85□□□□□ -1.63
SMG6-208ENST00000570874 MYO5BQ9ULV0 1848 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 E9PCH4 1651 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 CCDC141Q6ZP82 1450 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 NCOA1Q15788 1441 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 ROCK1Q13464 1354 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 ZNF316A6NFI3 1004 aaPredicted RBP4.84□□□□□ -1.63
SMG6-208ENST00000570874 MAFGO15525 162 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 BARGINQ6ZT62 677 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 ANKRD13AQ8IZ07 590 aa4.84□□□□□ -1.63
SMG6-208ENST00000570874 SPHKAPQ2M3C7 1700 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 IQGAP3Q86VI3 1631 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 ZFYVE16Q7Z3T8 1539 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 PLCH2O75038 1416 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 TRAPPC8Q9Y2L5 1435 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 A6NJR5 290 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 TRAK2O60296 914 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 NEUROD1Q13562 356 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 DEPDC5O75140 1603 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 ABCA6Q8N139 1617 aa4.83□□□□□ -1.64
SMG6-208ENST00000570874 CFAP74Q9C0B2 1584 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 DIP2BQ9P265 1576 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 ARAP3Q8WWN8 1544 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 CLSPNQ9HAW4 1339 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 KDM4AO75164 1064 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 EXOC8Q8IYI6 725 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 RETREG2Q8NC44 543 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 TRIM52Q96A61 297 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 PLA2G2EQ9NZK7 142 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 SIGLEC1Q9BZZ2 1709 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 ATP7AQ04656 1500 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 KDM5DQ9BY66 1539 aa4.82□□□□□ -1.64
SMG6-208ENST00000570874 ANKRD50Q9ULJ7 1429 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 MROH2AA6NES4 1674 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 MCCP23508 829 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 ANAPC15P60006 121 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 HSP90AB4PQ58FF6 505 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 KCNV2Q8TDN2 545 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 CCDC97Q96F63 343 aaPredicted RBP4.81□□□□□ -1.64
SMG6-208ENST00000570874 SERPINA10Q9UK55 444 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 MROH1Q8NDA8 1641 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 FRMPD1Q5SYB0 1578 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 KIF1BO60333 1816 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 FANCAO15360 1455 aa4.81□□□□□ -1.64
SMG6-208ENST00000570874 ANKRD30AQ9BXX3 1397 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 KIF15Q9NS87 1388 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 HECW2Q9P2P5 1572 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 GTPBP6O43824 516 aaPredicted RBP4.8□□□□□ -1.64
SMG6-208ENST00000570874 ZMYND10O75800 440 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 PTGER2P43116 358 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 NOL8Q76FK4 1167 aaKnown RBP4.8□□□□□ -1.64
SMG6-208ENST00000570874 SPATA32Q96LK8 384 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 MPHOSPH9Q99550 1183 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 GPBP1L1Q9HC44 474 aaPredicted RBP4.8□□□□□ -1.64
SMG6-208ENST00000570874 FAM135AQ9P2D6 1515 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 ADGRL1O94910 1474 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 PLEKHH2Q8IVE3 1493 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 KIAA1107Q9UPP5 1409 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 TET3O43151 1660 aa4.8□□□□□ -1.64
SMG6-208ENST00000570874 EIF2AK4Q9P2K8 1649 aaKnown RBP4.79□□□□□ -1.64
SMG6-208ENST00000570874 KDM5CP41229 1560 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 DUOX2Q9NRD8 1548 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 IRF5Q13568 498 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 CYB5RLQ6IPT4 315 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 DNAJC2Q99543 621 aaKnown RBP4.79□□□□□ -1.64
SMG6-208ENST00000570874 TMEM106CQ9BVX2 250 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 OCEL1Q9H607 264 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 RIPOR2Q9Y4F9 1068 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 IFT172Q9UG01 1749 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 TEX14Q8IWB6 1497 aa4.79□□□□□ -1.64
SMG6-208ENST00000570874 GLI2P10070 1586 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 BCORL1Q5H9F3 1711 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 MAGI2Q86UL8 1455 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 LOC102724159A0A0B4J2E5 919 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 SMARCA5O60264 1052 aaPredicted RBP4.78□□□□□ -1.64
SMG6-208ENST00000570874 NEFMP07197 916 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 PWP2Q15269 919 aaKnown RBP4.78□□□□□ -1.64
SMG6-208ENST00000570874 C3orf67Q6ZVT6 689 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 MYH16Q9H6N6 1097 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 CLTCL1P53675 1640 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 RNF17Q9BXT8 1623 aaKnown RBP4.78□□□□□ -1.64
SMG6-208ENST00000570874 SCAPERQ9BY12 1400 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 DIP2CQ9Y2E4 1556 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 ANKRD30BQ9BXX2 1392 aa4.78□□□□□ -1.64
SMG6-208ENST00000570874 RPRD2Q5VT52 1461 aaKnown RBP4.77□□□□□ -1.65
SMG6-208ENST00000570874 CAMSAP1Q5T5Y3 1602 aa4.77□□□□□ -1.65
SMG6-208ENST00000570874 TRPM1Q7Z4N2 1603 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms