RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.41
USP43-203ENST00000570827 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
USP43-203ENST00000570827 C14orf37Q86TY3 774 aa12.46□□□□□ -0.42
USP43-203ENST00000570827 ADGBQ8N7X0 1667 aa12.46□□□□□ -0.42
USP43-203ENST00000570827 RARSP54136 660 aaKnown RBP12.45□□□□□ -0.42
USP43-203ENST00000570827 FAM13BQ9NYF5 915 aa12.45□□□□□ -0.42
USP43-203ENST00000570827 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
USP43-203ENST00000570827 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
USP43-203ENST00000570827 ABCC10Q5T3U5 1492 aa12.44□□□□□ -0.42
USP43-203ENST00000570827 ESPNB1AK53 854 aa12.44□□□□□ -0.42
USP43-203ENST00000570827 ABCA8O94911 1581 aa12.44□□□□□ -0.42
USP43-203ENST00000570827 MPNDQ8N594 471 aa12.44□□□□□ -0.42
USP43-203ENST00000570827 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
USP43-203ENST00000570827 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
USP43-203ENST00000570827 NKTRP30414 1462 aaKnown RBP12.43□□□□□ -0.42
USP43-203ENST00000570827 ARHGEF12Q9NZN5 1544 aa12.43□□□□□ -0.42
USP43-203ENST00000570827 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
USP43-203ENST00000570827 ZNF428Q96B54 188 aa12.43□□□□□ -0.42
USP43-203ENST00000570827 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
USP43-203ENST00000570827 CALD1Q05682 793 aaKnown RBP12.42□□□□□ -0.42
USP43-203ENST00000570827 KDM5CP41229 1560 aa12.42□□□□□ -0.42
USP43-203ENST00000570827 CCDC141Q6ZP82 1450 aa12.42□□□□□ -0.42
USP43-203ENST00000570827 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
USP43-203ENST00000570827 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
USP43-203ENST00000570827 HMOX1P09601 288 aa12.42□□□□□ -0.42
USP43-203ENST00000570827 MCTP1Q6DN14 999 aa12.41□□□□□ -0.42
USP43-203ENST00000570827 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
USP43-203ENST00000570827 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
USP43-203ENST00000570827 MVPQ14764 893 aaKnown RBP12.41□□□□□ -0.42
USP43-203ENST00000570827 PRAG1Q86YV5 1406 aa12.4□□□□□ -0.42
USP43-203ENST00000570827 RIPK4P57078 832 aa12.4□□□□□ -0.42
USP43-203ENST00000570827 ZMYND15Q9H091 742 aa12.4□□□□□ -0.42
USP43-203ENST00000570827 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
USP43-203ENST00000570827 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.42
USP43-203ENST00000570827 DDX19BQ9UMR2 479 aa12.4□□□□□ -0.42
USP43-203ENST00000570827 CHD1O14646 1710 aa12.4□□□□□ -0.43
USP43-203ENST00000570827 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
USP43-203ENST00000570827 KANK1Q14678 1352 aa12.39□□□□□ -0.43
USP43-203ENST00000570827 RNF214Q8ND24 703 aa12.39□□□□□ -0.43
USP43-203ENST00000570827 ADCY10Q96PN6 1610 aa12.39□□□□□ -0.43
USP43-203ENST00000570827 CAVIN1Q6NZI2 390 aaKnown RBP12.39□□□□□ -0.43
USP43-203ENST00000570827 THUMPD2Q9BTF0 503 aaKnown RBP12.38□□□□□ -0.43
USP43-203ENST00000570827 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
USP43-203ENST00000570827 TMEM57Q8N5G2 664 aa12.38□□□□□ -0.43
USP43-203ENST00000570827 TNPO1Q92973 898 aaKnown RBP12.38□□□□□ -0.43
USP43-203ENST00000570827 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
USP43-203ENST00000570827 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
USP43-203ENST00000570827 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
USP43-203ENST00000570827 CARD14Q9BXL6 1004 aa12.36□□□□□ -0.43
USP43-203ENST00000570827 SAMD9LQ8IVG5 1584 aa12.36□□□□□ -0.43
USP43-203ENST00000570827 USP19O94966 1318 aa12.36□□□□□ -0.43
USP43-203ENST00000570827 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
USP43-203ENST00000570827 KDM5DQ9BY66 1539 aa12.35□□□□□ -0.43
USP43-203ENST00000570827 FAM135AQ9P2D6 1515 aa12.35□□□□□ -0.43
USP43-203ENST00000570827 SSFA2P28290 1259 aa12.35□□□□□ -0.43
USP43-203ENST00000570827 TRAPPC8Q9Y2L5 1435 aa12.35□□□□□ -0.43
USP43-203ENST00000570827 TRIM27P14373 513 aa12.35□□□□□ -0.43
USP43-203ENST00000570827 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
USP43-203ENST00000570827 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
USP43-203ENST00000570827 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
USP43-203ENST00000570827 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
USP43-203ENST00000570827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.34□□□□□ -0.43
USP43-203ENST00000570827 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
USP43-203ENST00000570827 ZMYM4Q5VZL5 1548 aa12.33□□□□□ -0.44
USP43-203ENST00000570827 CLCN1P35523 988 aa12.33□□□□□ -0.44
USP43-203ENST00000570827 PRPF40AO75400 957 aaKnown RBP12.33□□□□□ -0.44
USP43-203ENST00000570827 SKOR2Q2VWA4 1001 aaPredicted RBP12.33□□□□□ -0.44
USP43-203ENST00000570827 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
USP43-203ENST00000570827 SLC4A10Q6U841 1118 aa12.32□□□□□ -0.44
USP43-203ENST00000570827 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
USP43-203ENST00000570827 BCL11BQ9C0K0 894 aaPredicted RBP12.32□□□□□ -0.44
USP43-203ENST00000570827 LTV1Q96GA3 475 aaPredicted RBP12.31□□□□□ -0.44
USP43-203ENST00000570827 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
USP43-203ENST00000570827 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
USP43-203ENST00000570827 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
USP43-203ENST00000570827 NGEFQ8N5V2 710 aa12.31□□□□□ -0.44
USP43-203ENST00000570827 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
USP43-203ENST00000570827 INSRP06213 1382 aa12.31□□□□□ -0.44
USP43-203ENST00000570827 RRP9O43818 475 aaKnown RBP12.31□□□□□ -0.44
USP43-203ENST00000570827 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
USP43-203ENST00000570827 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
USP43-203ENST00000570827 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
USP43-203ENST00000570827 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
USP43-203ENST00000570827 A2MP01023 1474 aa12.3□□□□□ -0.44
USP43-203ENST00000570827 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
USP43-203ENST00000570827 PRAM1Q96QH2 718 aa12.3□□□□□ -0.44
USP43-203ENST00000570827 ZNF521Q96K83 1311 aa12.3□□□□□ -0.44
USP43-203ENST00000570827 MAGI2Q86UL8 1455 aa12.3□□□□□ -0.44
USP43-203ENST00000570827 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
USP43-203ENST00000570827 CFAP65Q6ZU64 1925 aaKnown RBP12.29□□□□□ -0.44
USP43-203ENST00000570827 K7ELQ4 463 aaPredicted RBP12.29□□□□□ -0.44
USP43-203ENST00000570827 PLCH2O75038 1416 aa12.29□□□□□ -0.44
USP43-203ENST00000570827 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
USP43-203ENST00000570827 ARHGEF5Q12774 1597 aa12.28□□□□□ -0.44
USP43-203ENST00000570827 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
USP43-203ENST00000570827 DIAPH1O60610 1272 aaKnown RBP12.28□□□□□ -0.44
USP43-203ENST00000570827 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
USP43-203ENST00000570827 TMPOP42166 694 aaKnown RBP12.28□□□□□ -0.44
USP43-203ENST00000570827 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
USP43-203ENST00000570827 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms