RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 ORAI2Q96SN7 254 aa7.93□□□□□ -1.14
CHD3-212ENST00000570758 CDC42BPGQ6DT37 1551 aa7.93□□□□□ -1.14
CHD3-212ENST00000570758 LRP6O75581 1613 aa7.92□□□□□ -1.14
CHD3-212ENST00000570758 NHSL1Q5SYE7 1610 aa7.92□□□□□ -1.14
CHD3-212ENST00000570758 SIRT1Q96EB6 747 aa7.92□□□□□ -1.14
CHD3-212ENST00000570758 LAMC1P11047 1609 aa7.92□□□□□ -1.14
CHD3-212ENST00000570758 NUTM2FA1L443 756 aa7.91□□□□□ -1.14
CHD3-212ENST00000570758 POTEAQ6S8J7 498 aa7.91□□□□□ -1.14
CHD3-212ENST00000570758 SPATA31A6Q5VVP1 1343 aa7.91□□□□□ -1.14
CHD3-212ENST00000570758 ADGRB1O14514 1584 aa7.91□□□□□ -1.14
CHD3-212ENST00000570758 SHPRHQ149N8 1683 aa7.91□□□□□ -1.14
CHD3-212ENST00000570758 PNPLA6Q8IY17 1366 aa7.9□□□□□ -1.14
CHD3-212ENST00000570758 SAFB2Q14151 953 aaKnown RBP eCLIP7.9□□□□□ -1.14
CHD3-212ENST00000570758 PRAM1Q96QH2 718 aa7.9□□□□□ -1.14
CHD3-212ENST00000570758 DLC1Q96QB1 1528 aa7.89□□□□□ -1.15
CHD3-212ENST00000570758 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
CHD3-212ENST00000570758 NUTM2BA6NNL0 878 aaPredicted RBP7.89□□□□□ -1.15
CHD3-212ENST00000570758 NUTM2EB1AL46 878 aaPredicted RBP7.89□□□□□ -1.15
CHD3-212ENST00000570758 ESCO1Q5FWF5 840 aa7.89□□□□□ -1.15
CHD3-212ENST00000570758 NUTM2AQ8IVF1 878 aaPredicted RBP7.89□□□□□ -1.15
CHD3-212ENST00000570758 LRRC59Q96AG4 307 aaKnown RBP7.89□□□□□ -1.15
CHD3-212ENST00000570758 TRAK1Q9UPV9 953 aa7.89□□□□□ -1.15
CHD3-212ENST00000570758 FMN2Q9NZ56 1722 aa7.89□□□□□ -1.15
CHD3-212ENST00000570758 MEX3CQ5U5Q3 659 aaKnown RBP7.88□□□□□ -1.15
CHD3-212ENST00000570758 STAC3Q96MF2 364 aa7.88□□□□□ -1.15
CHD3-212ENST00000570758 PXDNQ92626 1479 aa7.87□□□□□ -1.15
CHD3-212ENST00000570758 FOXO3O43524 673 aa7.87□□□□□ -1.15
CHD3-212ENST00000570758 XPCQ01831 940 aaPredicted RBP7.87□□□□□ -1.15
CHD3-212ENST00000570758 SIN3AQ96ST3 1273 aa7.87□□□□□ -1.15
CHD3-212ENST00000570758 POGKQ9P215 609 aa7.87□□□□□ -1.15
CHD3-212ENST00000570758 NPHP3Q7Z494 1330 aa7.86□□□□□ -1.15
CHD3-212ENST00000570758 MINK1Q8N4C8 1332 aaPredicted RBP7.86□□□□□ -1.15
CHD3-212ENST00000570758 HIRIP3Q9BW71 556 aaPredicted RBP7.86□□□□□ -1.15
CHD3-212ENST00000570758 ADGRB2O60241 1585 aa7.85□□□□□ -1.15
CHD3-212ENST00000570758 NBPF1Q3BBV0 1214 aa7.85□□□□□ -1.15
CHD3-212ENST00000570758 L3MBTL2Q969R5 705 aa7.85□□□□□ -1.15
CHD3-212ENST00000570758 USP32Q8NFA0 1604 aa7.85□□□□□ -1.15
CHD3-212ENST00000570758 RGPD8O14715 1765 aaPredicted RBP7.84□□□□□ -1.15
CHD3-212ENST00000570758 AFF2P51816 1311 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 PRR36Q9H6K5 1346 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 KIF1AQ12756 1690 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 ADAMTS2O95450 1211 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 NEUROD1Q13562 356 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 KRT28Q7Z3Y7 464 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 C8orf37Q96NL8 207 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 PHF8Q9UPP1 1060 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 ANKARQ7Z5J8 1434 aa7.84□□□□□ -1.15
CHD3-212ENST00000570758 ARHGEF28Q8N1W1 1705 aaKnown RBP7.83□□□□□ -1.16
CHD3-212ENST00000570758 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
CHD3-212ENST00000570758 COL22A1Q8NFW1 1626 aaPredicted RBP7.83□□□□□ -1.16
CHD3-212ENST00000570758 WASLO00401 505 aaPredicted RBP7.83□□□□□ -1.16
CHD3-212ENST00000570758 ZNF772Q68DY9 489 aaPredicted RBP7.83□□□□□ -1.16
CHD3-212ENST00000570758 PMFBP1Q8TBY8 1022 aa7.83□□□□□ -1.16
CHD3-212ENST00000570758 SPATA31A3Q5VYP0 1347 aa7.82□□□□□ -1.16
CHD3-212ENST00000570758 TRIM26Q12899 539 aaPredicted RBP7.82□□□□□ -1.16
CHD3-212ENST00000570758 TULP4Q9NRJ4 1543 aa7.82□□□□□ -1.16
CHD3-212ENST00000570758 NGLY1Q96IV0 654 aa7.81□□□□□ -1.16
CHD3-212ENST00000570758 SBNO1A3KN83 1393 aa7.81□□□□□ -1.16
CHD3-212ENST00000570758 TNS3Q68CZ2 1445 aa7.8□□□□□ -1.16
CHD3-212ENST00000570758 RXRBP28702 533 aa7.8□□□□□ -1.16
CHD3-212ENST00000570758 PSME1Q06323 249 aa7.8□□□□□ -1.16
CHD3-212ENST00000570758 NUDT16Q96DE0 195 aaKnown RBP7.8□□□□□ -1.16
CHD3-212ENST00000570758 CDK19Q9BWU1 502 aa7.8□□□□□ -1.16
CHD3-212ENST00000570758 QTRT2Q9H974 415 aaKnown RBP7.8□□□□□ -1.16
CHD3-212ENST00000570758 EIF3AQ14152 1382 aaKnown RBP7.8□□□□□ -1.16
CHD3-212ENST00000570758 ATP7BP35670 1465 aa7.8□□□□□ -1.16
CHD3-212ENST00000570758 PLEKHG5O94827 1062 aa7.79□□□□□ -1.16
CHD3-212ENST00000570758 NBPF8Q3BBV2 869 aa7.79□□□□□ -1.16
CHD3-212ENST00000570758 FNBP4Q8N3X1 1017 aaPredicted RBP7.79□□□□□ -1.16
CHD3-212ENST00000570758 CABLES1Q8TDN4 633 aa7.79□□□□□ -1.16
CHD3-212ENST00000570758 USP21Q9UK80 565 aa7.79□□□□□ -1.16
CHD3-212ENST00000570758 CENPJQ9HC77 1338 aaPredicted RBP7.78□□□□□ -1.16
CHD3-212ENST00000570758 TRPM1Q7Z4N2 1603 aa7.78□□□□□ -1.16
CHD3-212ENST00000570758 TRPM3Q9HCF6 1732 aaPredicted RBP7.78□□□□□ -1.16
CHD3-212ENST00000570758 LMOD2Q6P5Q4 547 aa7.78□□□□□ -1.16
CHD3-212ENST00000570758 RGS12O14924 1447 aa7.78□□□□□ -1.16
CHD3-212ENST00000570758 ATRNO75882 1429 aa7.78□□□□□ -1.16
CHD3-212ENST00000570758 BCL9LQ86UU0 1499 aa7.77□□□□□ -1.17
CHD3-212ENST00000570758 CDK12Q9NYV4 1490 aaPredicted RBP7.77□□□□□ -1.17
CHD3-212ENST00000570758 ARHGEF10O15013 1369 aa7.77□□□□□ -1.17
CHD3-212ENST00000570758 GPRASP1Q5JY77 1395 aa7.77□□□□□ -1.17
CHD3-212ENST00000570758 RBM6P78332 1123 aaKnown RBP7.77□□□□□ -1.17
CHD3-212ENST00000570758 NGDNQ8NEJ9 315 aaKnown RBP7.77□□□□□ -1.17
CHD3-212ENST00000570758 MARF1Q9Y4F3 1742 aaKnown RBP7.77□□□□□ -1.17
CHD3-212ENST00000570758 TOPAZ1Q8N9V7 1692 aa7.76□□□□□ -1.17
CHD3-212ENST00000570758 ALS2Q96Q42 1657 aa7.76□□□□□ -1.17
CHD3-212ENST00000570758 ROCK2O75116 1388 aaKnown RBP7.76□□□□□ -1.17
CHD3-212ENST00000570758 ABCA3Q99758 1704 aa7.76□□□□□ -1.17
CHD3-212ENST00000570758 TRPC5Q9UL62 973 aaPredicted RBP7.76□□□□□ -1.17
CHD3-212ENST00000570758 CCDC61Q9Y6R9 512 aa7.76□□□□□ -1.17
CHD3-212ENST00000570758 QRICH2Q9H0J4 1663 aa7.76□□□□□ -1.17
CHD3-212ENST00000570758 ACEP12821 1306 aa7.76□□□□□ -1.17
CHD3-212ENST00000570758 ITSN1Q15811 1721 aa7.75□□□□□ -1.17
CHD3-212ENST00000570758 POLR3AO14802 1390 aaPredicted RBP7.75□□□□□ -1.17
CHD3-212ENST00000570758 SLIT2O94813 1529 aa7.75□□□□□ -1.17
CHD3-212ENST00000570758 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
CHD3-212ENST00000570758 PAK3O75914 559 aaPredicted RBP7.75□□□□□ -1.17
CHD3-212ENST00000570758 HAP1P54257 671 aaPredicted RBP7.75□□□□□ -1.17
CHD3-212ENST00000570758 CABP2Q9NPB3 220 aa7.75□□□□□ -1.17
CHD3-212ENST00000570758 TONSLQ96HA7 1378 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms