RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TMEM132EQ6IEE7 984 aa22.24■■□□□ 1.15
RAB40B-203ENST00000570676 DDX17Q92841 729 aaKnown RBP22.23■■□□□ 1.15
RAB40B-203ENST00000570676 ADGRB1O14514 1584 aa22.23■■□□□ 1.15
RAB40B-203ENST00000570676 POTEAQ6S8J7 498 aa22.22■■□□□ 1.15
RAB40B-203ENST00000570676 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
RAB40B-203ENST00000570676 STK26Q9P289 416 aa22.21■■□□□ 1.15
RAB40B-203ENST00000570676 PNPLA6Q8IY17 1366 aa22.21■■□□□ 1.15
RAB40B-203ENST00000570676 DLC1Q96QB1 1528 aa22.2■■□□□ 1.14
RAB40B-203ENST00000570676 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
RAB40B-203ENST00000570676 ORAI2Q96SN7 254 aa22.19■■□□□ 1.14
RAB40B-203ENST00000570676 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
RAB40B-203ENST00000570676 CFAP70Q5T0N1 1121 aa22.18■■□□□ 1.14
RAB40B-203ENST00000570676 KIF1AQ12756 1690 aa22.17■■□□□ 1.14
RAB40B-203ENST00000570676 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
RAB40B-203ENST00000570676 ADGRB2O60241 1585 aa22.16■■□□□ 1.14
RAB40B-203ENST00000570676 SOS2Q07890 1332 aaPredicted RBP22.16■■□□□ 1.14
RAB40B-203ENST00000570676 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
RAB40B-203ENST00000570676 PXDNQ92626 1479 aa22.15■■□□□ 1.14
RAB40B-203ENST00000570676 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.14
RAB40B-203ENST00000570676 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
RAB40B-203ENST00000570676 ARHGEF28Q8N1W1 1705 aaKnown RBP22.12■■□□□ 1.13
RAB40B-203ENST00000570676 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
RAB40B-203ENST00000570676 USP32Q8NFA0 1604 aa22.12■■□□□ 1.13
RAB40B-203ENST00000570676 NUTM2BA6NNL0 878 aaPredicted RBP22.1■■□□□ 1.13
RAB40B-203ENST00000570676 NUTM2EB1AL46 878 aaPredicted RBP22.1■■□□□ 1.13
RAB40B-203ENST00000570676 NUTM2AQ8IVF1 878 aaPredicted RBP22.1■■□□□ 1.13
RAB40B-203ENST00000570676 MARF1Q9Y4F3 1742 aaKnown RBP22.09■■□□□ 1.13
RAB40B-203ENST00000570676 KIAA1210Q9ULL0 1709 aa22.09■■□□□ 1.13
RAB40B-203ENST00000570676 ESCO1Q5FWF5 840 aa22.08■■□□□ 1.13
RAB40B-203ENST00000570676 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.13
RAB40B-203ENST00000570676 NPHP3Q7Z494 1330 aa22.07■■□□□ 1.12
RAB40B-203ENST00000570676 NUTM2FA1L443 756 aa22.06■■□□□ 1.12
RAB40B-203ENST00000570676 ZNF772Q68DY9 489 aaPredicted RBP22.06■■□□□ 1.12
RAB40B-203ENST00000570676 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
RAB40B-203ENST00000570676 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
RAB40B-203ENST00000570676 STAC3Q96MF2 364 aa22.04■■□□□ 1.12
RAB40B-203ENST00000570676 AFF2P51816 1311 aa22.04■■□□□ 1.12
RAB40B-203ENST00000570676 SAFB2Q14151 953 aaKnown RBP eCLIP22.02■■□□□ 1.12
RAB40B-203ENST00000570676 ANKARQ7Z5J8 1434 aa22.02■■□□□ 1.12
RAB40B-203ENST00000570676 ABCA3Q99758 1704 aa22.01■■□□□ 1.11
RAB40B-203ENST00000570676 FOXO3O43524 673 aa22.01■■□□□ 1.11
RAB40B-203ENST00000570676 XPCQ01831 940 aaPredicted RBP22■■□□□ 1.11
RAB40B-203ENST00000570676 CDK12Q9NYV4 1490 aaPredicted RBP22■■□□□ 1.11
RAB40B-203ENST00000570676 TULP4Q9NRJ4 1543 aa22■■□□□ 1.11
RAB40B-203ENST00000570676 C8orf37Q96NL8 207 aa21.99■■□□□ 1.11
RAB40B-203ENST00000570676 TRAK1Q9UPV9 953 aa21.99■■□□□ 1.11
RAB40B-203ENST00000570676 TRPM3Q9HCF6 1732 aaPredicted RBP21.98■■□□□ 1.11
RAB40B-203ENST00000570676 POGKQ9P215 609 aa21.98■■□□□ 1.11
RAB40B-203ENST00000570676 ITSN1Q15811 1721 aa21.97■■□□□ 1.11
RAB40B-203ENST00000570676 ADAMTS2O95450 1211 aa21.96■■□□□ 1.11
RAB40B-203ENST00000570676 TNS3Q68CZ2 1445 aa21.96■■□□□ 1.11
RAB40B-203ENST00000570676 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.95■■□□□ 1.1
RAB40B-203ENST00000570676 PHF8Q9UPP1 1060 aa21.95■■□□□ 1.1
RAB40B-203ENST00000570676 SPATA31A3Q5VYP0 1347 aa21.94■■□□□ 1.1
RAB40B-203ENST00000570676 RGS12O14924 1447 aa21.94■■□□□ 1.1
RAB40B-203ENST00000570676 TOPAZ1Q8N9V7 1692 aa21.94■■□□□ 1.1
RAB40B-203ENST00000570676 MINK1Q8N4C8 1332 aaPredicted RBP21.93■■□□□ 1.1
RAB40B-203ENST00000570676 ALS2Q96Q42 1657 aa21.93■■□□□ 1.1
RAB40B-203ENST00000570676 ATP7BP35670 1465 aa21.92■■□□□ 1.1
RAB40B-203ENST00000570676 EIF3AQ14152 1382 aaKnown RBP21.92■■□□□ 1.1
RAB40B-203ENST00000570676 PRR36Q9H6K5 1346 aa21.92■■□□□ 1.1
RAB40B-203ENST00000570676 RXRBP28702 533 aa21.92■■□□□ 1.1
RAB40B-203ENST00000570676 HIRIP3Q9BW71 556 aaPredicted RBP21.92■■□□□ 1.1
RAB40B-203ENST00000570676 SBNO1A3KN83 1393 aa21.9■■□□□ 1.1
RAB40B-203ENST00000570676 CRYBG1Q9Y4K1 1723 aa21.9■■□□□ 1.1
RAB40B-203ENST00000570676 KRT28Q7Z3Y7 464 aa21.9■■□□□ 1.1
RAB40B-203ENST00000570676 NGLY1Q96IV0 654 aa21.9■■□□□ 1.1
RAB40B-203ENST00000570676 TRPM1Q7Z4N2 1603 aa21.9■■□□□ 1.1
RAB40B-203ENST00000570676 PLCH1Q4KWH8 1693 aa21.89■■□□□ 1.1
RAB40B-203ENST00000570676 ATRNO75882 1429 aa21.89■■□□□ 1.09
RAB40B-203ENST00000570676 FNBP4Q8N3X1 1017 aaPredicted RBP21.88■■□□□ 1.09
RAB40B-203ENST00000570676 BCL9LQ86UU0 1499 aa21.88■■□□□ 1.09
RAB40B-203ENST00000570676 WASLO00401 505 aaPredicted RBP21.87■■□□□ 1.09
RAB40B-203ENST00000570676 QTRT2Q9H974 415 aaKnown RBP21.87■■□□□ 1.09
RAB40B-203ENST00000570676 QRICH2Q9H0J4 1663 aa21.87■■□□□ 1.09
RAB40B-203ENST00000570676 RBM6P78332 1123 aaKnown RBP21.86■■□□□ 1.09
RAB40B-203ENST00000570676 USP21Q9UK80 565 aa21.86■■□□□ 1.09
RAB40B-203ENST00000570676 SLIT2O94813 1529 aa21.85■■□□□ 1.09
RAB40B-203ENST00000570676 PMFBP1Q8TBY8 1022 aa21.85■■□□□ 1.09
RAB40B-203ENST00000570676 NWD2Q9ULI1 1742 aa21.85■■□□□ 1.09
RAB40B-203ENST00000570676 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
RAB40B-203ENST00000570676 ARHGEF10O15013 1369 aa21.84■■□□□ 1.09
RAB40B-203ENST00000570676 PSME1Q06323 249 aa21.83■■□□□ 1.09
RAB40B-203ENST00000570676 L3MBTL2Q969R5 705 aa21.81■■□□□ 1.08
RAB40B-203ENST00000570676 SIN3AQ96ST3 1273 aa21.81■■□□□ 1.08
RAB40B-203ENST00000570676 TRPC5Q9UL62 973 aaPredicted RBP21.81■■□□□ 1.08
RAB40B-203ENST00000570676 GLI3P10071 1580 aa21.81■■□□□ 1.08
RAB40B-203ENST00000570676 NRAPQ86VF7 1730 aa21.8■■□□□ 1.08
RAB40B-203ENST00000570676 GPRASP1Q5JY77 1395 aa21.78■■□□□ 1.08
RAB40B-203ENST00000570676 PHRF1Q9P1Y6 1649 aaKnown RBP21.78■■□□□ 1.08
RAB40B-203ENST00000570676 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.08
RAB40B-203ENST00000570676 CABLES1Q8TDN4 633 aa21.77■■□□□ 1.08
RAB40B-203ENST00000570676 NUDT16Q96DE0 195 aaKnown RBP21.76■■□□□ 1.07
RAB40B-203ENST00000570676 COL14A1Q05707 1796 aaKnown RBP21.75■■□□□ 1.07
RAB40B-203ENST00000570676 POLR3AO14802 1390 aaPredicted RBP21.74■■□□□ 1.07
RAB40B-203ENST00000570676 LMOD2Q6P5Q4 547 aa21.74■■□□□ 1.07
RAB40B-203ENST00000570676 CDK19Q9BWU1 502 aa21.74■■□□□ 1.07
RAB40B-203ENST00000570676 RALGAPBQ86X10 1494 aa21.74■■□□□ 1.07
RAB40B-203ENST00000570676 CENPJQ9HC77 1338 aaPredicted RBP21.74■■□□□ 1.07
RAB40B-203ENST00000570676 BRWD3Q6RI45 1802 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms