RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 SAFB2Q14151 953 aaKnown RBP eCLIP25.13■■□□□ 1.61
SPNS2-202ENST00000570641 WAPLQ7Z5K2 1190 aa25.13■■□□□ 1.61
SPNS2-202ENST00000570641 CERKQ8TCT0 537 aa25.13■■□□□ 1.61
SPNS2-202ENST00000570641 POLR3GLQ9BT43 218 aa25.12■■□□□ 1.61
SPNS2-202ENST00000570641 PLEKHH1Q9ULM0 1364 aa25.12■■□□□ 1.61
SPNS2-202ENST00000570641 EVC2Q86UK5 1308 aa25.12■■□□□ 1.61
SPNS2-202ENST00000570641 KCNA6P17658 529 aa25.11■■□□□ 1.61
SPNS2-202ENST00000570641 DDX10Q13206 875 aaKnown RBP25.1■■□□□ 1.61
SPNS2-202ENST00000570641 TULP4Q9NRJ4 1543 aa25.1■■□□□ 1.61
SPNS2-202ENST00000570641 MINK1Q8N4C8 1332 aaPredicted RBP25.1■■□□□ 1.61
SPNS2-202ENST00000570641 DIEXFQ68CQ4 756 aaKnown RBP25.09■■□□□ 1.61
SPNS2-202ENST00000570641 PUS7Q96PZ0 661 aaKnown RBP25.07■■□□□ 1.6
SPNS2-202ENST00000570641 DMRT2Q9Y5R5 561 aa25.07■■□□□ 1.6
SPNS2-202ENST00000570641 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.06■■□□□ 1.6
SPNS2-202ENST00000570641 ADGRB2O60241 1585 aa25.06■■□□□ 1.6
SPNS2-202ENST00000570641 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
SPNS2-202ENST00000570641 MYOM1P52179 1685 aa25.02■■□□□ 1.6
SPNS2-202ENST00000570641 ILDR2Q71H61 639 aa25.02■■□□□ 1.6
SPNS2-202ENST00000570641 STRCP1A6NGW2 1772 aa25.01■■□□□ 1.59
SPNS2-202ENST00000570641 WASLO00401 505 aaPredicted RBP24.99■■□□□ 1.59
SPNS2-202ENST00000570641 SRPK2P78362 688 aaKnown RBP24.99■■□□□ 1.59
SPNS2-202ENST00000570641 CDK19Q9BWU1 502 aa24.99■■□□□ 1.59
SPNS2-202ENST00000570641 ATAD2Q6PL18 1390 aa24.98■■□□□ 1.59
SPNS2-202ENST00000570641 NALCNQ8IZF0 1738 aa24.98■■□□□ 1.59
SPNS2-202ENST00000570641 CABP2Q9NPB3 220 aa24.96■■□□□ 1.59
SPNS2-202ENST00000570641 PROSER2Q86WR7 435 aaPredicted RBP24.95■■□□□ 1.58
SPNS2-202ENST00000570641 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
SPNS2-202ENST00000570641 SOCS7O14512 581 aa24.94■■□□□ 1.58
SPNS2-202ENST00000570641 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
SPNS2-202ENST00000570641 CDC42BPGQ6DT37 1551 aa24.93■■□□□ 1.58
SPNS2-202ENST00000570641 NCOA3Q9Y6Q9 1424 aa24.92■■□□□ 1.58
SPNS2-202ENST00000570641 FMN2Q9NZ56 1722 aa24.91■■□□□ 1.58
SPNS2-202ENST00000570641 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
SPNS2-202ENST00000570641 C14orf37Q86TY3 774 aa24.89■■□□□ 1.58
SPNS2-202ENST00000570641 ITSN1Q15811 1721 aa24.89■■□□□ 1.57
SPNS2-202ENST00000570641 PANK3Q9H999 370 aa24.88■■□□□ 1.57
SPNS2-202ENST00000570641 ZNF335Q9H4Z2 1342 aaPredicted RBP24.87■■□□□ 1.57
SPNS2-202ENST00000570641 ATP7BP35670 1465 aa24.87■■□□□ 1.57
SPNS2-202ENST00000570641 TOPAZ1Q8N9V7 1692 aa24.86■■□□□ 1.57
SPNS2-202ENST00000570641 NUDT16Q96DE0 195 aaKnown RBP24.86■■□□□ 1.57
SPNS2-202ENST00000570641 ANKARQ7Z5J8 1434 aa24.86■■□□□ 1.57
SPNS2-202ENST00000570641 TMEM94Q12767 1356 aa24.85■■□□□ 1.57
SPNS2-202ENST00000570641 XIRP1Q702N8 1843 aaKnown RBP24.85■■□□□ 1.57
SPNS2-202ENST00000570641 RBM33Q96EV2 1170 aaKnown RBP24.85■■□□□ 1.57
SPNS2-202ENST00000570641 SLC12A5Q9H2X9 1139 aa24.85■■□□□ 1.57
SPNS2-202ENST00000570641 USP32Q8NFA0 1604 aa24.84■■□□□ 1.57
SPNS2-202ENST00000570641 ANKRD36BQ8N2N9 1353 aa24.83■■□□□ 1.57
SPNS2-202ENST00000570641 RGPD8O14715 1765 aaPredicted RBP24.83■■□□□ 1.57
SPNS2-202ENST00000570641 CCDC61Q9Y6R9 512 aa24.83■■□□□ 1.57
SPNS2-202ENST00000570641 PPIP5K1Q6PFW1 1433 aa24.83■■□□□ 1.57
SPNS2-202ENST00000570641 LRRC7Q96NW7 1537 aa24.82■■□□□ 1.56
SPNS2-202ENST00000570641 PRR36Q9H6K5 1346 aa24.82■■□□□ 1.56
SPNS2-202ENST00000570641 ANP32CO43423 234 aa24.81■■□□□ 1.56
SPNS2-202ENST00000570641 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
SPNS2-202ENST00000570641 TERF2IPQ9NYB0 399 aa24.81■■□□□ 1.56
SPNS2-202ENST00000570641 DCCP43146 1447 aa24.8■■□□□ 1.56
SPNS2-202ENST00000570641 CABP1Q9NZU7 370 aa24.8■■□□□ 1.56
SPNS2-202ENST00000570641 PER1O15534 1290 aaPredicted RBP24.79■■□□□ 1.56
SPNS2-202ENST00000570641 HDGFL2Q7Z4V5 671 aaPredicted RBP24.79■■□□□ 1.56
SPNS2-202ENST00000570641 AKAP12Q02952 1782 aa24.78■■□□□ 1.56
SPNS2-202ENST00000570641 KNSTRNQ9Y448 316 aa24.78■■□□□ 1.56
SPNS2-202ENST00000570641 MSH6P52701 1360 aa24.78■■□□□ 1.56
SPNS2-202ENST00000570641 NUTM2FA1L443 756 aa24.77■■□□□ 1.56
SPNS2-202ENST00000570641 CD163L1Q9NR16 1453 aa24.77■■□□□ 1.56
SPNS2-202ENST00000570641 A0A1W2PP64 1363 aa24.76■■□□□ 1.55
SPNS2-202ENST00000570641 PLEKHG3A1L390 1219 aa24.75■■□□□ 1.55
SPNS2-202ENST00000570641 ATF3P18847 181 aa24.74■■□□□ 1.55
SPNS2-202ENST00000570641 NSD3Q9BZ95 1437 aa24.74■■□□□ 1.55
SPNS2-202ENST00000570641 MON2Q7Z3U7 1717 aa24.74■■□□□ 1.55
SPNS2-202ENST00000570641 MIER1Q8N108 512 aa24.73■■□□□ 1.55
SPNS2-202ENST00000570641 CARD14Q9BXL6 1004 aa24.73■■□□□ 1.55
SPNS2-202ENST00000570641 CPSF1Q10570 1443 aaKnown RBP24.72■■□□□ 1.55
SPNS2-202ENST00000570641 CADPS2Q86UW7 1296 aa24.72■■□□□ 1.55
SPNS2-202ENST00000570641 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
SPNS2-202ENST00000570641 KTN1Q86UP2 1357 aaKnown RBP24.71■■□□□ 1.55
SPNS2-202ENST00000570641 NPC1L1Q9UHC9 1359 aa24.71■■□□□ 1.55
SPNS2-202ENST00000570641 ZNF692Q9BU19 519 aaPredicted RBP24.71■■□□□ 1.55
SPNS2-202ENST00000570641 PRKRIP1Q9H875 184 aaPredicted RBP24.69■■□□□ 1.54
SPNS2-202ENST00000570641 ACEP12821 1306 aa24.68■■□□□ 1.54
SPNS2-202ENST00000570641 AMER1Q5JTC6 1135 aaPredicted RBP24.68■■□□□ 1.54
SPNS2-202ENST00000570641 C1orf167Q5SNV9 1468 aa24.68■■□□□ 1.54
SPNS2-202ENST00000570641 KIF1AQ12756 1690 aa24.68■■□□□ 1.54
SPNS2-202ENST00000570641 MST1RQ04912 1400 aa24.68■■□□□ 1.54
SPNS2-202ENST00000570641 POLR3AO14802 1390 aaPredicted RBP24.67■■□□□ 1.54
SPNS2-202ENST00000570641 KIF20BQ96Q89 1820 aa24.67■■□□□ 1.54
SPNS2-202ENST00000570641 EDC4Q6P2E9 1401 aaKnown RBP24.67■■□□□ 1.54
SPNS2-202ENST00000570641 CGNL1Q0VF96 1302 aa24.66■■□□□ 1.54
SPNS2-202ENST00000570641 NGDNQ8NEJ9 315 aaKnown RBP24.66■■□□□ 1.54
SPNS2-202ENST00000570641 PHF8Q9UPP1 1060 aa24.66■■□□□ 1.54
SPNS2-202ENST00000570641 RALBP1Q15311 655 aa24.65■■□□□ 1.54
SPNS2-202ENST00000570641 PMFBP1Q8TBY8 1022 aa24.65■■□□□ 1.54
SPNS2-202ENST00000570641 NSD2O96028 1365 aa24.65■■□□□ 1.54
SPNS2-202ENST00000570641 NRKQ7Z2Y5 1582 aa24.64■■□□□ 1.54
SPNS2-202ENST00000570641 ESCO1Q5FWF5 840 aa24.64■■□□□ 1.54
SPNS2-202ENST00000570641 CC2D1BQ5T0F9 858 aaKnown RBP24.64■■□□□ 1.54
SPNS2-202ENST00000570641 ANKRD26Q9UPS8 1709 aa24.64■■□□□ 1.53
SPNS2-202ENST00000570641 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
SPNS2-202ENST00000570641 USP6P35125 1406 aa24.62■■□□□ 1.53
SPNS2-202ENST00000570641 PARD3Q8TEW0 1356 aa24.62■■□□□ 1.53
SPNS2-202ENST00000570641 BRD4O60885 1362 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms