RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
USP43-202ENST00000570475 THUMPD2Q9BTF0 503 aaKnown RBP19.35■□□□□ 0.69
USP43-202ENST00000570475 NOS1P29475 1434 aa19.34■□□□□ 0.69
USP43-202ENST00000570475 ANKRD45Q5TZF3 282 aa19.34■□□□□ 0.69
USP43-202ENST00000570475 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
USP43-202ENST00000570475 RAPGEF3O95398 923 aa19.33■□□□□ 0.69
USP43-202ENST00000570475 MVPQ14764 893 aaKnown RBP19.33■□□□□ 0.69
USP43-202ENST00000570475 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.69
USP43-202ENST00000570475 ARHGEF5Q12774 1597 aa19.33■□□□□ 0.68
USP43-202ENST00000570475 PRDM15P57071 1507 aaPredicted RBP19.32■□□□□ 0.68
USP43-202ENST00000570475 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
USP43-202ENST00000570475 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
USP43-202ENST00000570475 ADCY10Q96PN6 1610 aa19.32■□□□□ 0.68
USP43-202ENST00000570475 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
USP43-202ENST00000570475 PIK3C2GO75747 1445 aa19.31■□□□□ 0.68
USP43-202ENST00000570475 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
USP43-202ENST00000570475 GOLGA6L3A6NEY3 463 aa19.31■□□□□ 0.68
USP43-202ENST00000570475 UGGT1Q9NYU2 1555 aa19.31■□□□□ 0.68
USP43-202ENST00000570475 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
USP43-202ENST00000570475 TPRNQ4KMQ1 711 aa19.3■□□□□ 0.68
USP43-202ENST00000570475 TMEM57Q8N5G2 664 aa19.3■□□□□ 0.68
USP43-202ENST00000570475 WDR63Q8IWG1 891 aa19.3■□□□□ 0.68
USP43-202ENST00000570475 TRIM27P14373 513 aa19.29■□□□□ 0.68
USP43-202ENST00000570475 NGEFQ8N5V2 710 aa19.29■□□□□ 0.68
USP43-202ENST00000570475 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
USP43-202ENST00000570475 VGFO15240 615 aaPredicted RBP19.29■□□□□ 0.68
USP43-202ENST00000570475 CDC42BPBQ9Y5S2 1711 aa19.28■□□□□ 0.68
USP43-202ENST00000570475 IPO8O15397 1037 aaKnown RBP19.28■□□□□ 0.68
USP43-202ENST00000570475 TMPOP42166 694 aaKnown RBP19.28■□□□□ 0.68
USP43-202ENST00000570475 DDX19BQ9UMR2 479 aa19.28■□□□□ 0.68
USP43-202ENST00000570475 DIAPH1O60610 1272 aaKnown RBP19.27■□□□□ 0.68
USP43-202ENST00000570475 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
USP43-202ENST00000570475 HDGFL2Q7Z4V5 671 aaPredicted RBP19.27■□□□□ 0.68
USP43-202ENST00000570475 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
USP43-202ENST00000570475 EIF2AK4Q9P2K8 1649 aaKnown RBP19.27■□□□□ 0.67
USP43-202ENST00000570475 TERF2IPQ9NYB0 399 aa19.26■□□□□ 0.67
USP43-202ENST00000570475 PLEKHG5O94827 1062 aa19.26■□□□□ 0.67
USP43-202ENST00000570475 ATF7IPQ6VMQ6 1270 aa19.26■□□□□ 0.67
USP43-202ENST00000570475 ATP10AO60312 1499 aa19.26■□□□□ 0.67
USP43-202ENST00000570475 USP19O94966 1318 aa19.25■□□□□ 0.67
USP43-202ENST00000570475 TBC1D32Q96NH3 1257 aa19.25■□□□□ 0.67
USP43-202ENST00000570475 MAST1Q9Y2H9 1570 aa19.25■□□□□ 0.67
USP43-202ENST00000570475 PRKAR2BP31323 418 aa19.25■□□□□ 0.67
USP43-202ENST00000570475 CABP1Q9NZU7 370 aa19.24■□□□□ 0.67
USP43-202ENST00000570475 FANCAO15360 1455 aa19.23■□□□□ 0.67
USP43-202ENST00000570475 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
USP43-202ENST00000570475 C14orf93Q9H972 538 aaKnown RBP19.22■□□□□ 0.67
USP43-202ENST00000570475 TRAK2O60296 914 aa19.22■□□□□ 0.67
USP43-202ENST00000570475 TRIM44Q96DX7 344 aaPredicted RBP19.22■□□□□ 0.67
USP43-202ENST00000570475 PANK2Q9BZ23 570 aa19.22■□□□□ 0.67
USP43-202ENST00000570475 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
USP43-202ENST00000570475 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
USP43-202ENST00000570475 MCM4P33991 863 aa19.21■□□□□ 0.67
USP43-202ENST00000570475 POLR3AO14802 1390 aaPredicted RBP19.2■□□□□ 0.66
USP43-202ENST00000570475 FOXD4L5Q5VV16 416 aaPredicted RBP19.2■□□□□ 0.66
USP43-202ENST00000570475 FOXD4L4Q8WXT5 416 aaPredicted RBP19.2■□□□□ 0.66
USP43-202ENST00000570475 ERVK-7P63135 1459 aa19.2■□□□□ 0.66
USP43-202ENST00000570475 INSRP06213 1382 aa19.19■□□□□ 0.66
USP43-202ENST00000570475 E9PCH4 1651 aa19.19■□□□□ 0.66
USP43-202ENST00000570475 IDI1Q13907 227 aa19.19■□□□□ 0.66
USP43-202ENST00000570475 DCTN1Q14203 1278 aa19.17■□□□□ 0.66
USP43-202ENST00000570475 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
USP43-202ENST00000570475 WAPLQ7Z5K2 1190 aa19.16■□□□□ 0.66
USP43-202ENST00000570475 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
USP43-202ENST00000570475 ZBTB7CA1YPR0 619 aa19.15■□□□□ 0.66
USP43-202ENST00000570475 CDK19Q9BWU1 502 aa19.15■□□□□ 0.66
USP43-202ENST00000570475 NPC1L1Q9UHC9 1359 aa19.15■□□□□ 0.66
USP43-202ENST00000570475 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.66
USP43-202ENST00000570475 PTPRTO14522 1441 aa19.14■□□□□ 0.65
USP43-202ENST00000570475 FYB1O15117 783 aa19.14■□□□□ 0.65
USP43-202ENST00000570475 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
USP43-202ENST00000570475 NINLQ9Y2I6 1382 aa19.14■□□□□ 0.65
USP43-202ENST00000570475 FBXO31Q5XUX0 539 aaPredicted RBP19.14■□□□□ 0.65
USP43-202ENST00000570475 SLC4A10Q6U841 1118 aa19.13■□□□□ 0.65
USP43-202ENST00000570475 ANP32BQ92688 251 aaKnown RBP19.13■□□□□ 0.65
USP43-202ENST00000570475 CHD1LQ86WJ1 897 aa19.13■□□□□ 0.65
USP43-202ENST00000570475 RRS1Q15050 365 aaKnown RBP19.12■□□□□ 0.65
USP43-202ENST00000570475 ESF1Q9H501 851 aaKnown RBP19.12■□□□□ 0.65
USP43-202ENST00000570475 IQGAP3Q86VI3 1631 aa19.12■□□□□ 0.65
USP43-202ENST00000570475 KIF16BQ96L93 1317 aa19.12■□□□□ 0.65
USP43-202ENST00000570475 XRCC6P12956 609 aaKnown RBP eCLIP19.12■□□□□ 0.65
USP43-202ENST00000570475 TRIM35Q9UPQ4 493 aa19.12■□□□□ 0.65
USP43-202ENST00000570475 EMILIN1Q9Y6C2 1016 aa19.12■□□□□ 0.65
USP43-202ENST00000570475 MYO5CQ9NQX4 1742 aa19.11■□□□□ 0.65
USP43-202ENST00000570475 GOLGA6L22H0YM25 854 aa19.11■□□□□ 0.65
USP43-202ENST00000570475 FOXD4L6Q3SYB3 417 aaPredicted RBP19.11■□□□□ 0.65
USP43-202ENST00000570475 FOXD4L3Q6VB84 417 aaPredicted RBP19.11■□□□□ 0.65
USP43-202ENST00000570475 TSPYL6Q8N831 410 aa19.11■□□□□ 0.65
USP43-202ENST00000570475 UNC13BO14795 1591 aa19.11■□□□□ 0.65
USP43-202ENST00000570475 FAM83GA6ND36 823 aa19.11■□□□□ 0.65
USP43-202ENST00000570475 FAM43AQ8N2R8 423 aa19.11■□□□□ 0.65
USP43-202ENST00000570475 GBP4Q96PP9 640 aa19.11■□□□□ 0.65
USP43-202ENST00000570475 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
USP43-202ENST00000570475 AAMPQ13685 434 aa19.09■□□□□ 0.65
USP43-202ENST00000570475 PHACTR3Q96KR7 559 aa19.09■□□□□ 0.65
USP43-202ENST00000570475 RRAGDQ9NQL2 400 aaPredicted RBP19.09■□□□□ 0.65
USP43-202ENST00000570475 CLTCL1P53675 1640 aa19.09■□□□□ 0.65
USP43-202ENST00000570475 SYNMO15061 1565 aa19.09■□□□□ 0.65
USP43-202ENST00000570475 NECTIN2Q92692 538 aa19.08■□□□□ 0.65
USP43-202ENST00000570475 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms