RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-215ENST00000569189 TRIM26Q12899 539 aaPredicted RBP35.39■■■■□ 3.26
GGA2-215ENST00000569189 SIRT1Q96EB6 747 aa35.37■■■■□ 3.25
GGA2-215ENST00000569189 DLC1Q96QB1 1528 aa35.36■■■■□ 3.25
GGA2-215ENST00000569189 SHPRHQ149N8 1683 aa35.35■■■■□ 3.25
GGA2-215ENST00000569189 ILDR2Q71H61 639 aa35.33■■■■□ 3.25
GGA2-215ENST00000569189 PHF23Q9BUL5 403 aaPredicted RBP35.33■■■■□ 3.25
GGA2-215ENST00000569189 FMN2Q9NZ56 1722 aa35.32■■■■□ 3.24
GGA2-215ENST00000569189 KIAA1210Q9ULL0 1709 aa35.29■■■■□ 3.24
GGA2-215ENST00000569189 ORAI2Q96SN7 254 aa35.28■■■■□ 3.24
GGA2-215ENST00000569189 PRAM1Q96QH2 718 aa35.27■■■■□ 3.24
GGA2-215ENST00000569189 DDX17Q92841 729 aaKnown RBP35.25■■■■□ 3.23
GGA2-215ENST00000569189 TRAK1Q9UPV9 953 aa35.23■■■■□ 3.23
GGA2-215ENST00000569189 SAFB2Q14151 953 aaKnown RBP eCLIP35.22■■■■□ 3.23
GGA2-215ENST00000569189 POGKQ9P215 609 aa35.22■■■■□ 3.23
GGA2-215ENST00000569189 ARHGEF28Q8N1W1 1705 aaKnown RBP35.22■■■■□ 3.23
GGA2-215ENST00000569189 SPATA31A6Q5VVP1 1343 aa35.22■■■■□ 3.23
GGA2-215ENST00000569189 SIN3AQ96ST3 1273 aa35.21■■■■□ 3.23
GGA2-215ENST00000569189 ADGRB2O60241 1585 aa35.21■■■■□ 3.23
GGA2-215ENST00000569189 ESCO1Q5FWF5 840 aa35.2■■■■□ 3.23
GGA2-215ENST00000569189 NUTM2FA1L443 756 aa35.19■■■■□ 3.22
GGA2-215ENST00000569189 RGPD8O14715 1765 aaPredicted RBP35.19■■■■□ 3.22
GGA2-215ENST00000569189 LRRC59Q96AG4 307 aaKnown RBP35.18■■■■□ 3.22
GGA2-215ENST00000569189 LRP6O75581 1613 aa35.17■■■■□ 3.22
GGA2-215ENST00000569189 KIF1AQ12756 1690 aa35.16■■■■□ 3.22
GGA2-215ENST00000569189 SOS2Q07890 1332 aaPredicted RBP35.14■■■■□ 3.22
GGA2-215ENST00000569189 NEUROD1Q13562 356 aa35.14■■■■□ 3.22
GGA2-215ENST00000569189 L3MBTL2Q969R5 705 aa35.14■■■■□ 3.22
GGA2-215ENST00000569189 NPHP3Q7Z494 1330 aa35.11■■■■□ 3.21
GGA2-215ENST00000569189 RGS17Q9UGC6 210 aaPredicted RBP35.11■■■■□ 3.21
GGA2-215ENST00000569189 PNPLA6Q8IY17 1366 aa35.11■■■■□ 3.21
GGA2-215ENST00000569189 PXDNQ92626 1479 aa35.09■■■■□ 3.21
GGA2-215ENST00000569189 USP32Q8NFA0 1604 aa35.08■■■■□ 3.21
GGA2-215ENST00000569189 MINK1Q8N4C8 1332 aaPredicted RBP35.07■■■■□ 3.21
GGA2-215ENST00000569189 NBPF1Q3BBV0 1214 aa35.06■■■■□ 3.2
GGA2-215ENST00000569189 HIRIP3Q9BW71 556 aaPredicted RBP35.06■■■■□ 3.2
GGA2-215ENST00000569189 ANKARQ7Z5J8 1434 aa35.06■■■■□ 3.2
GGA2-215ENST00000569189 FOXO3O43524 673 aa35.05■■■■□ 3.2
GGA2-215ENST00000569189 MEX3CQ5U5Q3 659 aaKnown RBP35.05■■■■□ 3.2
GGA2-215ENST00000569189 TRPM1Q7Z4N2 1603 aa35.04■■■■□ 3.2
GGA2-215ENST00000569189 NUTM2BA6NNL0 878 aaPredicted RBP35.04■■■■□ 3.2
GGA2-215ENST00000569189 NUTM2EB1AL46 878 aaPredicted RBP35.04■■■■□ 3.2
GGA2-215ENST00000569189 NUTM2AQ8IVF1 878 aaPredicted RBP35.04■■■■□ 3.2
GGA2-215ENST00000569189 COL22A1Q8NFW1 1626 aaPredicted RBP35.02■■■■□ 3.2
GGA2-215ENST00000569189 EIF3AQ14152 1382 aaKnown RBP35.01■■■■□ 3.2
GGA2-215ENST00000569189 TULP4Q9NRJ4 1543 aa35.01■■■■□ 3.19
GGA2-215ENST00000569189 XPCQ01831 940 aaPredicted RBP35■■■■□ 3.19
GGA2-215ENST00000569189 SOCS7O14512 581 aa34.99■■■■□ 3.19
GGA2-215ENST00000569189 PHF8Q9UPP1 1060 aa34.99■■■■□ 3.19
GGA2-215ENST00000569189 WASLO00401 505 aaPredicted RBP34.97■■■■□ 3.19
GGA2-215ENST00000569189 POTEAQ6S8J7 498 aa34.94■■■■□ 3.18
GGA2-215ENST00000569189 ITSN1Q15811 1721 aa34.93■■■■□ 3.18
GGA2-215ENST00000569189 PRR36Q9H6K5 1346 aa34.92■■■■□ 3.18
GGA2-215ENST00000569189 QRICH2Q9H0J4 1663 aa34.91■■■■□ 3.18
GGA2-215ENST00000569189 TONSLQ96HA7 1378 aa34.9■■■■□ 3.18
GGA2-215ENST00000569189 KRT28Q7Z3Y7 464 aa34.9■■■■□ 3.18
GGA2-215ENST00000569189 ATP7BP35670 1465 aa34.88■■■■□ 3.17
GGA2-215ENST00000569189 ROCK2O75116 1388 aaKnown RBP34.87■■■■□ 3.17
GGA2-215ENST00000569189 CENPJQ9HC77 1338 aaPredicted RBP34.87■■■■□ 3.17
GGA2-215ENST00000569189 PMFBP1Q8TBY8 1022 aa34.87■■■■□ 3.17
GGA2-215ENST00000569189 SPATA31A3Q5VYP0 1347 aa34.86■■■■□ 3.17
GGA2-215ENST00000569189 ZNF772Q68DY9 489 aaPredicted RBP34.86■■■■□ 3.17
GGA2-215ENST00000569189 PSME1Q06323 249 aa34.85■■■■□ 3.17
GGA2-215ENST00000569189 MARF1Q9Y4F3 1742 aaKnown RBP34.84■■■■□ 3.17
GGA2-215ENST00000569189 TNS3Q68CZ2 1445 aa34.84■■■■□ 3.17
GGA2-215ENST00000569189 TOPAZ1Q8N9V7 1692 aa34.83■■■■□ 3.17
GGA2-215ENST00000569189 ADAMTS2O95450 1211 aa34.83■■■■□ 3.17
GGA2-215ENST00000569189 NBPF8Q3BBV2 869 aa34.83■■■■□ 3.17
GGA2-215ENST00000569189 C8orf37Q96NL8 207 aa34.83■■■■□ 3.17
GGA2-215ENST00000569189 AFF2P51816 1311 aa34.82■■■■□ 3.17
GGA2-215ENST00000569189 TRPM3Q9HCF6 1732 aaPredicted RBP34.82■■■■□ 3.16
GGA2-215ENST00000569189 CDK19Q9BWU1 502 aa34.82■■■■□ 3.16
GGA2-215ENST00000569189 SBNO1A3KN83 1393 aa34.82■■■■□ 3.16
GGA2-215ENST00000569189 NUDT16Q96DE0 195 aaKnown RBP34.8■■■■□ 3.16
GGA2-215ENST00000569189 GPRASP1Q5JY77 1395 aa34.78■■■■□ 3.16
GGA2-215ENST00000569189 NGLY1Q96IV0 654 aa34.75■■■■□ 3.15
GGA2-215ENST00000569189 PCGF6Q9BYE7 350 aa34.75■■■■□ 3.15
GGA2-215ENST00000569189 RALGAPBQ86X10 1494 aa34.75■■■■□ 3.15
GGA2-215ENST00000569189 ARHGEF10O15013 1369 aa34.74■■■■□ 3.15
GGA2-215ENST00000569189 ALS2Q96Q42 1657 aa34.74■■■■□ 3.15
GGA2-215ENST00000569189 NGDNQ8NEJ9 315 aaKnown RBP34.74■■■■□ 3.15
GGA2-215ENST00000569189 ABCA3Q99758 1704 aa34.74■■■■□ 3.15
GGA2-215ENST00000569189 LMOD2Q6P5Q4 547 aa34.7■■■■□ 3.15
GGA2-215ENST00000569189 CCDC61Q9Y6R9 512 aa34.7■■■■□ 3.15
GGA2-215ENST00000569189 SRPK2P78362 688 aaKnown RBP34.69■■■■□ 3.14
GGA2-215ENST00000569189 POLR3AO14802 1390 aaPredicted RBP34.66■■■■□ 3.14
GGA2-215ENST00000569189 CARD11Q9BXL7 1154 aa34.66■■■■□ 3.14
GGA2-215ENST00000569189 CABP2Q9NPB3 220 aa34.65■■■■□ 3.14
GGA2-215ENST00000569189 RXRBP28702 533 aa34.64■■■■□ 3.14
GGA2-215ENST00000569189 FNBP4Q8N3X1 1017 aaPredicted RBP34.64■■■■□ 3.14
GGA2-215ENST00000569189 PLEKHG3A1L390 1219 aa34.63■■■■□ 3.13
GGA2-215ENST00000569189 USP21Q9UK80 565 aa34.63■■■■□ 3.13
GGA2-215ENST00000569189 PPIP5K1Q6PFW1 1433 aa34.63■■■■□ 3.13
GGA2-215ENST00000569189 ACEP12821 1306 aa34.62■■■■□ 3.13
GGA2-215ENST00000569189 EVC2Q86UK5 1308 aa34.62■■■■□ 3.13
GGA2-215ENST00000569189 HAP1P54257 671 aaPredicted RBP34.62■■■■□ 3.13
GGA2-215ENST00000569189 CABLES1Q8TDN4 633 aa34.62■■■■□ 3.13
GGA2-215ENST00000569189 QTRT2Q9H974 415 aaKnown RBP34.62■■■■□ 3.13
GGA2-215ENST00000569189 PAK3O75914 559 aaPredicted RBP34.6■■■■□ 3.13
GGA2-215ENST00000569189 PLEKHG5O94827 1062 aa34.6■■■■□ 3.13
GGA2-215ENST00000569189 CRYBG1Q9Y4K1 1723 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms