RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
SCAMP2-210ENST00000569124 SOS2Q07890 1332 aaPredicted RBP22.99■■□□□ 1.27
SCAMP2-210ENST00000569124 ORAI2Q96SN7 254 aa22.98■■□□□ 1.27
SCAMP2-210ENST00000569124 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.97■■□□□ 1.27
SCAMP2-210ENST00000569124 FMN2Q9NZ56 1722 aa22.97■■□□□ 1.27
SCAMP2-210ENST00000569124 KIF1AQ12756 1690 aa22.97■■□□□ 1.27
SCAMP2-210ENST00000569124 RGPD8O14715 1765 aaPredicted RBP22.96■■□□□ 1.27
SCAMP2-210ENST00000569124 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
SCAMP2-210ENST00000569124 PXDNQ92626 1479 aa22.93■■□□□ 1.26
SCAMP2-210ENST00000569124 MYOM2P54296 1465 aa22.92■■□□□ 1.26
SCAMP2-210ENST00000569124 CCDC144AA2RUR9 1427 aa22.92■■□□□ 1.26
SCAMP2-210ENST00000569124 ATAD2Q6PL18 1390 aa22.92■■□□□ 1.26
SCAMP2-210ENST00000569124 USP21Q9UK80 565 aa22.92■■□□□ 1.26
SCAMP2-210ENST00000569124 NPHP3Q7Z494 1330 aa22.91■■□□□ 1.26
SCAMP2-210ENST00000569124 TECPR2O15040 1411 aa22.91■■□□□ 1.26
SCAMP2-210ENST00000569124 TRPC5Q9UL62 973 aaPredicted RBP22.9■■□□□ 1.26
SCAMP2-210ENST00000569124 ATRNO75882 1429 aa22.89■■□□□ 1.25
SCAMP2-210ENST00000569124 ESCO1Q5FWF5 840 aa22.88■■□□□ 1.25
SCAMP2-210ENST00000569124 ANKRD30BQ9BXX2 1392 aa22.87■■□□□ 1.25
SCAMP2-210ENST00000569124 SPATA31E1Q6ZUB1 1445 aa22.86■■□□□ 1.25
SCAMP2-210ENST00000569124 FNBP4Q8N3X1 1017 aaPredicted RBP22.86■■□□□ 1.25
SCAMP2-210ENST00000569124 BRWD3Q6RI45 1802 aa22.86■■□□□ 1.25
SCAMP2-210ENST00000569124 LRPPRCP42704 1394 aaKnown RBP22.86■■□□□ 1.25
SCAMP2-210ENST00000569124 FOXD1Q16676 465 aa22.85■■□□□ 1.25
SCAMP2-210ENST00000569124 USP32Q8NFA0 1604 aa22.85■■□□□ 1.25
SCAMP2-210ENST00000569124 ABCA3Q99758 1704 aa22.85■■□□□ 1.25
SCAMP2-210ENST00000569124 ADGRF5Q8IZF2 1346 aa22.84■■□□□ 1.25
SCAMP2-210ENST00000569124 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
SCAMP2-210ENST00000569124 PLCH1Q4KWH8 1693 aa22.83■■□□□ 1.24
SCAMP2-210ENST00000569124 EP400Q96L91 3159 aa22.83■■□□□ 1.24
SCAMP2-210ENST00000569124 STK26Q9P289 416 aa22.82■■□□□ 1.24
SCAMP2-210ENST00000569124 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
SCAMP2-210ENST00000569124 RGL3Q3MIN7 710 aa22.81■■□□□ 1.24
SCAMP2-210ENST00000569124 NWD2Q9ULI1 1742 aa22.81■■□□□ 1.24
SCAMP2-210ENST00000569124 BCL9LQ86UU0 1499 aa22.8■■□□□ 1.24
SCAMP2-210ENST00000569124 FOXO3O43524 673 aa22.8■■□□□ 1.24
SCAMP2-210ENST00000569124 ABCC11Q96J66 1382 aa22.79■■□□□ 1.24
SCAMP2-210ENST00000569124 NUTM2FA1L443 756 aa22.79■■□□□ 1.24
SCAMP2-210ENST00000569124 YTHDC2Q9H6S0 1430 aaKnown RBP22.79■■□□□ 1.24
SCAMP2-210ENST00000569124 PLEKHH1Q9ULM0 1364 aa22.78■■□□□ 1.24
SCAMP2-210ENST00000569124 GLI3P10071 1580 aa22.78■■□□□ 1.24
SCAMP2-210ENST00000569124 WAPLQ7Z5K2 1190 aa22.78■■□□□ 1.24
SCAMP2-210ENST00000569124 MPHOSPH9Q99550 1183 aa22.75■■□□□ 1.23
SCAMP2-210ENST00000569124 ACIN1Q9UKV3 1341 aaKnown RBP22.75■■□□□ 1.23
SCAMP2-210ENST00000569124 RAB3GAP2Q9H2M9 1393 aa22.75■■□□□ 1.23
SCAMP2-210ENST00000569124 TMEM132EQ6IEE7 984 aa22.74■■□□□ 1.23
SCAMP2-210ENST00000569124 SLIT2O94813 1529 aa22.73■■□□□ 1.23
SCAMP2-210ENST00000569124 GJD4Q96KN9 370 aaPredicted RBP22.72■■□□□ 1.23
SCAMP2-210ENST00000569124 SPATA31A3Q5VYP0 1347 aa22.72■■□□□ 1.23
SCAMP2-210ENST00000569124 TNS3Q68CZ2 1445 aa22.72■■□□□ 1.23
SCAMP2-210ENST00000569124 RALGAPBQ86X10 1494 aa22.72■■□□□ 1.23
SCAMP2-210ENST00000569124 NRXN1Q9ULB1 1477 aa22.71■■□□□ 1.23
SCAMP2-210ENST00000569124 ADGRB2O60241 1585 aa22.7■■□□□ 1.22
SCAMP2-210ENST00000569124 CCDC125Q86Z20 511 aa22.69■■□□□ 1.22
SCAMP2-210ENST00000569124 HRCP23327 699 aa22.68■■□□□ 1.22
SCAMP2-210ENST00000569124 ZRANB1Q9UGI0 708 aa22.68■■□□□ 1.22
SCAMP2-210ENST00000569124 NRAPQ86VF7 1730 aa22.68■■□□□ 1.22
SCAMP2-210ENST00000569124 TRPM3Q9HCF6 1732 aaPredicted RBP22.68■■□□□ 1.22
SCAMP2-210ENST00000569124 DLC1Q96QB1 1528 aa22.67■■□□□ 1.22
SCAMP2-210ENST00000569124 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
SCAMP2-210ENST00000569124 UNC5CLQ8IV45 518 aa22.67■■□□□ 1.22
SCAMP2-210ENST00000569124 DHX57Q6P158 1386 aaKnown RBP22.66■■□□□ 1.22
SCAMP2-210ENST00000569124 KRT28Q7Z3Y7 464 aa22.66■■□□□ 1.22
SCAMP2-210ENST00000569124 SIRT1Q96EB6 747 aa22.65■■□□□ 1.22
SCAMP2-210ENST00000569124 ITSN1Q15811 1721 aa22.65■■□□□ 1.22
SCAMP2-210ENST00000569124 ALS2Q96Q42 1657 aa22.65■■□□□ 1.22
SCAMP2-210ENST00000569124 PSME1Q06323 249 aa22.64■■□□□ 1.21
SCAMP2-210ENST00000569124 PHF8Q9UPP1 1060 aa22.64■■□□□ 1.21
SCAMP2-210ENST00000569124 BLMP54132 1417 aaPredicted RBP22.64■■□□□ 1.21
SCAMP2-210ENST00000569124 C14orf93Q9H972 538 aaKnown RBP22.63■■□□□ 1.21
SCAMP2-210ENST00000569124 ARHGEF10O15013 1369 aa22.63■■□□□ 1.21
SCAMP2-210ENST00000569124 ANKARQ7Z5J8 1434 aa22.62■■□□□ 1.21
SCAMP2-210ENST00000569124 SRCAPQ6ZRS2 3230 aa22.62■■□□□ 1.21
SCAMP2-210ENST00000569124 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
SCAMP2-210ENST00000569124 SBNO1A3KN83 1393 aa22.62■■□□□ 1.21
SCAMP2-210ENST00000569124 COL14A1Q05707 1796 aaKnown RBP22.61■■□□□ 1.21
SCAMP2-210ENST00000569124 CFAP70Q5T0N1 1121 aa22.6■■□□□ 1.21
SCAMP2-210ENST00000569124 ADGRB1O14514 1584 aa22.59■■□□□ 1.21
SCAMP2-210ENST00000569124 SAFB2Q14151 953 aaKnown RBP eCLIP22.59■■□□□ 1.21
SCAMP2-210ENST00000569124 RGPD1P0DJD0 1748 aa22.58■■□□□ 1.21
SCAMP2-210ENST00000569124 ARHGEF28Q8N1W1 1705 aaKnown RBP22.58■■□□□ 1.21
SCAMP2-210ENST00000569124 PLEKHG5O94827 1062 aa22.58■■□□□ 1.21
SCAMP2-210ENST00000569124 LMOD2Q6P5Q4 547 aa22.58■■□□□ 1.21
SCAMP2-210ENST00000569124 PRAM1Q96QH2 718 aa22.58■■□□□ 1.21
SCAMP2-210ENST00000569124 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
SCAMP2-210ENST00000569124 VPS72Q15906 364 aa22.56■■□□□ 1.2
SCAMP2-210ENST00000569124 POGKQ9P215 609 aa22.56■■□□□ 1.2
SCAMP2-210ENST00000569124 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
SCAMP2-210ENST00000569124 TULP4Q9NRJ4 1543 aa22.56■■□□□ 1.2
SCAMP2-210ENST00000569124 LRP5O75197 1615 aa22.54■■□□□ 1.2
SCAMP2-210ENST00000569124 EIF3AQ14152 1382 aaKnown RBP22.54■■□□□ 1.2
SCAMP2-210ENST00000569124 SF3B2Q13435 895 aaKnown RBP22.54■■□□□ 1.2
SCAMP2-210ENST00000569124 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
SCAMP2-210ENST00000569124 PMFBP1Q8TBY8 1022 aa22.52■■□□□ 1.2
SCAMP2-210ENST00000569124 PHRF1Q9P1Y6 1649 aaKnown RBP22.51■■□□□ 1.19
SCAMP2-210ENST00000569124 GPRASP1Q5JY77 1395 aa22.5■■□□□ 1.19
SCAMP2-210ENST00000569124 KRT27Q7Z3Y8 459 aa22.49■■□□□ 1.19
SCAMP2-210ENST00000569124 TNS1Q9HBL0 1735 aaKnown RBP22.48■■□□□ 1.19
SCAMP2-210ENST00000569124 A0A0G2JS52 829 aa22.48■■□□□ 1.19
SCAMP2-210ENST00000569124 MYT1Q01538 1121 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms