RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 LRRC59Q96AG4 307 aaKnown RBP27.43■■□□□ 1.98
CPNE7-209ENST00000568977 ORAI2Q96SN7 254 aa27.43■■□□□ 1.98
CPNE7-209ENST00000568977 PNPLA6Q8IY17 1366 aa27.42■■□□□ 1.98
CPNE7-209ENST00000568977 PLEKHH1Q9ULM0 1364 aa27.41■■□□□ 1.98
CPNE7-209ENST00000568977 NUTM2BA6NNL0 878 aaPredicted RBP27.4■■□□□ 1.98
CPNE7-209ENST00000568977 NUTM2EB1AL46 878 aaPredicted RBP27.4■■□□□ 1.98
CPNE7-209ENST00000568977 WAPLQ7Z5K2 1190 aa27.4■■□□□ 1.98
CPNE7-209ENST00000568977 NUTM2AQ8IVF1 878 aaPredicted RBP27.4■■□□□ 1.98
CPNE7-209ENST00000568977 C14orf93Q9H972 538 aaKnown RBP27.39■■□□□ 1.98
CPNE7-209ENST00000568977 FMN2Q9NZ56 1722 aa27.38■■□□□ 1.97
CPNE7-209ENST00000568977 HRCP23327 699 aa27.37■■□□□ 1.97
CPNE7-209ENST00000568977 SOS2Q07890 1332 aaPredicted RBP27.37■■□□□ 1.97
CPNE7-209ENST00000568977 CFAP70Q5T0N1 1121 aa27.36■■□□□ 1.97
CPNE7-209ENST00000568977 ZNF772Q68DY9 489 aaPredicted RBP27.35■■□□□ 1.97
CPNE7-209ENST00000568977 DHX57Q6P158 1386 aaKnown RBP27.34■■□□□ 1.97
CPNE7-209ENST00000568977 ESCO1Q5FWF5 840 aa27.32■■□□□ 1.96
CPNE7-209ENST00000568977 ADGRB1O14514 1584 aa27.31■■□□□ 1.96
CPNE7-209ENST00000568977 PXDNQ92626 1479 aa27.31■■□□□ 1.96
CPNE7-209ENST00000568977 COL22A1Q8NFW1 1626 aaPredicted RBP27.3■■□□□ 1.96
CPNE7-209ENST00000568977 NPHP3Q7Z494 1330 aa27.3■■□□□ 1.96
CPNE7-209ENST00000568977 DLC1Q96QB1 1528 aa27.3■■□□□ 1.96
CPNE7-209ENST00000568977 KIF1AQ12756 1690 aa27.3■■□□□ 1.96
CPNE7-209ENST00000568977 NUTM2FA1L443 756 aa27.29■■□□□ 1.96
CPNE7-209ENST00000568977 SIRT1Q96EB6 747 aa27.29■■□□□ 1.96
CPNE7-209ENST00000568977 AFF2P51816 1311 aa27.28■■□□□ 1.96
CPNE7-209ENST00000568977 RGPD8O14715 1765 aaPredicted RBP27.25■■□□□ 1.95
CPNE7-209ENST00000568977 DCAF11Q8TEB1 546 aa27.24■■□□□ 1.95
CPNE7-209ENST00000568977 C8orf37Q96NL8 207 aa27.24■■□□□ 1.95
CPNE7-209ENST00000568977 ADGRB2O60241 1585 aa27.23■■□□□ 1.95
CPNE7-209ENST00000568977 FOXO3O43524 673 aa27.23■■□□□ 1.95
CPNE7-209ENST00000568977 PRAM1Q96QH2 718 aa27.23■■□□□ 1.95
CPNE7-209ENST00000568977 KDM2AQ9Y2K7 1162 aa27.23■■□□□ 1.95
CPNE7-209ENST00000568977 XPCQ01831 940 aaPredicted RBP27.22■■□□□ 1.95
CPNE7-209ENST00000568977 ADAMTS2O95450 1211 aa27.21■■□□□ 1.95
CPNE7-209ENST00000568977 SAFB2Q14151 953 aaKnown RBP eCLIP27.21■■□□□ 1.95
CPNE7-209ENST00000568977 CDK12Q9NYV4 1490 aaPredicted RBP27.19■■□□□ 1.94
CPNE7-209ENST00000568977 RXRBP28702 533 aa27.18■■□□□ 1.94
CPNE7-209ENST00000568977 STAC3Q96MF2 364 aa27.18■■□□□ 1.94
CPNE7-209ENST00000568977 USP32Q8NFA0 1604 aa27.17■■□□□ 1.94
CPNE7-209ENST00000568977 POGKQ9P215 609 aa27.17■■□□□ 1.94
CPNE7-209ENST00000568977 MARF1Q9Y4F3 1742 aaKnown RBP27.16■■□□□ 1.94
CPNE7-209ENST00000568977 NGLY1Q96IV0 654 aa27.15■■□□□ 1.94
CPNE7-209ENST00000568977 TRAK1Q9UPV9 953 aa27.15■■□□□ 1.94
CPNE7-209ENST00000568977 ARHGEF28Q8N1W1 1705 aaKnown RBP27.15■■□□□ 1.94
CPNE7-209ENST00000568977 ANKARQ7Z5J8 1434 aa27.14■■□□□ 1.93
CPNE7-209ENST00000568977 PHF8Q9UPP1 1060 aa27.11■■□□□ 1.93
CPNE7-209ENST00000568977 SPATA31A3Q5VYP0 1347 aa27.11■■□□□ 1.93
CPNE7-209ENST00000568977 RGS12O14924 1447 aa27.1■■□□□ 1.93
CPNE7-209ENST00000568977 KIAA1210Q9ULL0 1709 aa27.1■■□□□ 1.93
CPNE7-209ENST00000568977 QTRT2Q9H974 415 aaKnown RBP27.09■■□□□ 1.93
CPNE7-209ENST00000568977 TNS3Q68CZ2 1445 aa27.08■■□□□ 1.93
CPNE7-209ENST00000568977 TULP4Q9NRJ4 1543 aa27.08■■□□□ 1.93
CPNE7-209ENST00000568977 RBM6P78332 1123 aaKnown RBP27.08■■□□□ 1.93
CPNE7-209ENST00000568977 KRT28Q7Z3Y7 464 aa27.08■■□□□ 1.93
CPNE7-209ENST00000568977 HIRIP3Q9BW71 556 aaPredicted RBP27.07■■□□□ 1.92
CPNE7-209ENST00000568977 USP21Q9UK80 565 aa27.07■■□□□ 1.92
CPNE7-209ENST00000568977 MINK1Q8N4C8 1332 aaPredicted RBP27.07■■□□□ 1.92
CPNE7-209ENST00000568977 EIF3AQ14152 1382 aaKnown RBP27.07■■□□□ 1.92
CPNE7-209ENST00000568977 FNBP4Q8N3X1 1017 aaPredicted RBP27.06■■□□□ 1.92
CPNE7-209ENST00000568977 ABCA3Q99758 1704 aa27.04■■□□□ 1.92
CPNE7-209ENST00000568977 ATRNO75882 1429 aa27.03■■□□□ 1.92
CPNE7-209ENST00000568977 SBNO1A3KN83 1393 aa27.02■■□□□ 1.92
CPNE7-209ENST00000568977 PRR36Q9H6K5 1346 aa27.02■■□□□ 1.92
CPNE7-209ENST00000568977 PSME1Q06323 249 aa27.02■■□□□ 1.92
CPNE7-209ENST00000568977 TRPC5Q9UL62 973 aaPredicted RBP27.02■■□□□ 1.92
CPNE7-209ENST00000568977 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.02■■□□□ 1.92
CPNE7-209ENST00000568977 TRPM3Q9HCF6 1732 aaPredicted RBP27.02■■□□□ 1.92
CPNE7-209ENST00000568977 PMFBP1Q8TBY8 1022 aa27.01■■□□□ 1.91
CPNE7-209ENST00000568977 ITSN1Q15811 1721 aa27■■□□□ 1.91
CPNE7-209ENST00000568977 WASLO00401 505 aaPredicted RBP27■■□□□ 1.91
CPNE7-209ENST00000568977 BCL9LQ86UU0 1499 aa27■■□□□ 1.91
CPNE7-209ENST00000568977 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
CPNE7-209ENST00000568977 ATP7BP35670 1465 aa26.98■■□□□ 1.91
CPNE7-209ENST00000568977 ARHGEF10O15013 1369 aa26.97■■□□□ 1.91
CPNE7-209ENST00000568977 ALS2Q96Q42 1657 aa26.96■■□□□ 1.91
CPNE7-209ENST00000568977 SLIT2O94813 1529 aa26.95■■□□□ 1.91
CPNE7-209ENST00000568977 PLCH1Q4KWH8 1693 aa26.94■■□□□ 1.9
CPNE7-209ENST00000568977 HAP1P54257 671 aaPredicted RBP26.93■■□□□ 1.9
CPNE7-209ENST00000568977 LMOD2Q6P5Q4 547 aa26.93■■□□□ 1.9
CPNE7-209ENST00000568977 GPRASP1Q5JY77 1395 aa26.93■■□□□ 1.9
CPNE7-209ENST00000568977 TOPAZ1Q8N9V7 1692 aa26.92■■□□□ 1.9
CPNE7-209ENST00000568977 CABLES1Q8TDN4 633 aa26.92■■□□□ 1.9
CPNE7-209ENST00000568977 PLEKHG5O94827 1062 aa26.91■■□□□ 1.9
CPNE7-209ENST00000568977 NBPF1Q3BBV0 1214 aa26.91■■□□□ 1.9
CPNE7-209ENST00000568977 NWD2Q9ULI1 1742 aa26.9■■□□□ 1.9
CPNE7-209ENST00000568977 GLI3P10071 1580 aa26.88■■□□□ 1.89
CPNE7-209ENST00000568977 CRYBG1Q9Y4K1 1723 aa26.87■■□□□ 1.89
CPNE7-209ENST00000568977 UNC5CLQ8IV45 518 aa26.87■■□□□ 1.89
CPNE7-209ENST00000568977 NGDNQ8NEJ9 315 aaKnown RBP26.87■■□□□ 1.89
CPNE7-209ENST00000568977 L3MBTL2Q969R5 705 aa26.86■■□□□ 1.89
CPNE7-209ENST00000568977 NUDT16Q96DE0 195 aaKnown RBP26.86■■□□□ 1.89
CPNE7-209ENST00000568977 GJD4Q96KN9 370 aaPredicted RBP26.86■■□□□ 1.89
CPNE7-209ENST00000568977 RALGAPBQ86X10 1494 aa26.86■■□□□ 1.89
CPNE7-209ENST00000568977 QRICH2Q9H0J4 1663 aa26.85■■□□□ 1.89
CPNE7-209ENST00000568977 ATAD2Q6PL18 1390 aa26.85■■□□□ 1.89
CPNE7-209ENST00000568977 TRPM1Q7Z4N2 1603 aa26.85■■□□□ 1.89
CPNE7-209ENST00000568977 SIN3AQ96ST3 1273 aa26.84■■□□□ 1.89
CPNE7-209ENST00000568977 CDK19Q9BWU1 502 aa26.84■■□□□ 1.89
CPNE7-209ENST00000568977 NRAPQ86VF7 1730 aa26.82■■□□□ 1.88
CPNE7-209ENST00000568977 CENPJQ9HC77 1338 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms