RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 LAMC1P11047 1609 aa16.5■□□□□ 0.23
SNAPC5-208ENST00000568875 PHLPP1O60346 1717 aa16.5■□□□□ 0.23
SNAPC5-208ENST00000568875 C1orf167Q5SNV9 1468 aa16.5■□□□□ 0.23
SNAPC5-208ENST00000568875 KNDC1Q76NI1 1749 aa16.49■□□□□ 0.23
SNAPC5-208ENST00000568875 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
SNAPC5-208ENST00000568875 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
SNAPC5-208ENST00000568875 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
SNAPC5-208ENST00000568875 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
SNAPC5-208ENST00000568875 COL16A1Q07092 1604 aaPredicted RBP16.48■□□□□ 0.23
SNAPC5-208ENST00000568875 ADGRB1O14514 1584 aa16.48■□□□□ 0.23
SNAPC5-208ENST00000568875 JCADQ9P266 1359 aa16.48■□□□□ 0.23
SNAPC5-208ENST00000568875 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
SNAPC5-208ENST00000568875 DDX17Q92841 729 aaKnown RBP16.46■□□□□ 0.23
SNAPC5-208ENST00000568875 PRAM1Q96QH2 718 aa16.46■□□□□ 0.23
SNAPC5-208ENST00000568875 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
SNAPC5-208ENST00000568875 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
SNAPC5-208ENST00000568875 L3MBTL2Q969R5 705 aa16.44■□□□□ 0.22
SNAPC5-208ENST00000568875 DLC1Q96QB1 1528 aa16.44■□□□□ 0.22
SNAPC5-208ENST00000568875 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
SNAPC5-208ENST00000568875 POGKQ9P215 609 aa16.43■□□□□ 0.22
SNAPC5-208ENST00000568875 NHSL1Q5SYE7 1610 aa16.42■□□□□ 0.22
SNAPC5-208ENST00000568875 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNAPC5-208ENST00000568875 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
SNAPC5-208ENST00000568875 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
SNAPC5-208ENST00000568875 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
SNAPC5-208ENST00000568875 RGS17Q9UGC6 210 aaPredicted RBP16.42■□□□□ 0.22
SNAPC5-208ENST00000568875 MIER1Q8N108 512 aa16.41■□□□□ 0.22
SNAPC5-208ENST00000568875 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
SNAPC5-208ENST00000568875 SPATA31A6Q5VVP1 1343 aa16.41■□□□□ 0.22
SNAPC5-208ENST00000568875 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
SNAPC5-208ENST00000568875 TIMELESSQ9UNS1 1208 aa16.4■□□□□ 0.22
SNAPC5-208ENST00000568875 SHPRHQ149N8 1683 aa16.37■□□□□ 0.21
SNAPC5-208ENST00000568875 FOXO3O43524 673 aa16.37■□□□□ 0.21
SNAPC5-208ENST00000568875 FMN2Q9NZ56 1722 aa16.37■□□□□ 0.21
SNAPC5-208ENST00000568875 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
SNAPC5-208ENST00000568875 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
SNAPC5-208ENST00000568875 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
SNAPC5-208ENST00000568875 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
SNAPC5-208ENST00000568875 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
SNAPC5-208ENST00000568875 LRP6O75581 1613 aa16.34■□□□□ 0.21
SNAPC5-208ENST00000568875 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
SNAPC5-208ENST00000568875 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.21
SNAPC5-208ENST00000568875 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
SNAPC5-208ENST00000568875 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
SNAPC5-208ENST00000568875 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
SNAPC5-208ENST00000568875 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
SNAPC5-208ENST00000568875 ADGRB2O60241 1585 aa16.32■□□□□ 0.2
SNAPC5-208ENST00000568875 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
SNAPC5-208ENST00000568875 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
SNAPC5-208ENST00000568875 PXDNQ92626 1479 aa16.32■□□□□ 0.2
SNAPC5-208ENST00000568875 ARHGEF28Q8N1W1 1705 aaKnown RBP16.31■□□□□ 0.2
SNAPC5-208ENST00000568875 SOCS7O14512 581 aa16.31■□□□□ 0.2
SNAPC5-208ENST00000568875 POTEAQ6S8J7 498 aa16.31■□□□□ 0.2
SNAPC5-208ENST00000568875 ANKARQ7Z5J8 1434 aa16.31■□□□□ 0.2
SNAPC5-208ENST00000568875 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
SNAPC5-208ENST00000568875 MEX3CQ5U5Q3 659 aaKnown RBP16.3■□□□□ 0.2
SNAPC5-208ENST00000568875 KRT28Q7Z3Y7 464 aa16.3■□□□□ 0.2
SNAPC5-208ENST00000568875 NBPF8Q3BBV2 869 aa16.29■□□□□ 0.2
SNAPC5-208ENST00000568875 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
SNAPC5-208ENST00000568875 PMFBP1Q8TBY8 1022 aa16.28■□□□□ 0.2
SNAPC5-208ENST00000568875 KIF1AQ12756 1690 aa16.28■□□□□ 0.2
SNAPC5-208ENST00000568875 EIF3AQ14152 1382 aaKnown RBP16.27■□□□□ 0.2
SNAPC5-208ENST00000568875 CDK19Q9BWU1 502 aa16.27■□□□□ 0.19
SNAPC5-208ENST00000568875 SPATA31A3Q5VYP0 1347 aa16.27■□□□□ 0.19
SNAPC5-208ENST00000568875 PSME1Q06323 249 aa16.26■□□□□ 0.19
SNAPC5-208ENST00000568875 NUDT16Q96DE0 195 aaKnown RBP16.26■□□□□ 0.19
SNAPC5-208ENST00000568875 TULP4Q9NRJ4 1543 aa16.26■□□□□ 0.19
SNAPC5-208ENST00000568875 TRPM1Q7Z4N2 1603 aa16.26■□□□□ 0.19
SNAPC5-208ENST00000568875 CENPJQ9HC77 1338 aaPredicted RBP16.25■□□□□ 0.19
SNAPC5-208ENST00000568875 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
SNAPC5-208ENST00000568875 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
SNAPC5-208ENST00000568875 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
SNAPC5-208ENST00000568875 COL22A1Q8NFW1 1626 aaPredicted RBP16.24■□□□□ 0.19
SNAPC5-208ENST00000568875 ROCK2O75116 1388 aaKnown RBP16.24■□□□□ 0.19
SNAPC5-208ENST00000568875 C8orf37Q96NL8 207 aa16.23■□□□□ 0.19
SNAPC5-208ENST00000568875 SBNO1A3KN83 1393 aa16.23■□□□□ 0.19
SNAPC5-208ENST00000568875 AFF2P51816 1311 aa16.22■□□□□ 0.19
SNAPC5-208ENST00000568875 GPRASP1Q5JY77 1395 aa16.22■□□□□ 0.19
SNAPC5-208ENST00000568875 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
SNAPC5-208ENST00000568875 ATP7BP35670 1465 aa16.22■□□□□ 0.19
SNAPC5-208ENST00000568875 NGLY1Q96IV0 654 aa16.21■□□□□ 0.19
SNAPC5-208ENST00000568875 NGDNQ8NEJ9 315 aaKnown RBP16.2■□□□□ 0.18
SNAPC5-208ENST00000568875 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
SNAPC5-208ENST00000568875 PLEKHG3A1L390 1219 aa16.19■□□□□ 0.18
SNAPC5-208ENST00000568875 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
SNAPC5-208ENST00000568875 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
SNAPC5-208ENST00000568875 CARD11Q9BXL7 1154 aa16.18■□□□□ 0.18
SNAPC5-208ENST00000568875 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
SNAPC5-208ENST00000568875 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
SNAPC5-208ENST00000568875 QTRT2Q9H974 415 aaKnown RBP16.17■□□□□ 0.18
SNAPC5-208ENST00000568875 ARHGEF10O15013 1369 aa16.17■□□□□ 0.18
SNAPC5-208ENST00000568875 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
SNAPC5-208ENST00000568875 CABLES1Q8TDN4 633 aa16.16■□□□□ 0.18
SNAPC5-208ENST00000568875 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
SNAPC5-208ENST00000568875 ACEP12821 1306 aa16.16■□□□□ 0.18
SNAPC5-208ENST00000568875 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
SNAPC5-208ENST00000568875 RXRBP28702 533 aa16.16■□□□□ 0.18
SNAPC5-208ENST00000568875 RALGAPBQ86X10 1494 aa16.15■□□□□ 0.18
SNAPC5-208ENST00000568875 USP21Q9UK80 565 aa16.15■□□□□ 0.18
SNAPC5-208ENST00000568875 ITSN1Q15811 1721 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms