RNA–Protein interactions for RNA: ENST00000568292.1

CDH3-207, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-207ENST00000568292 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
CDH3-207ENST00000568292 DDX17Q92841 729 aaKnown RBP14.88□□□□□ -0.03
CDH3-207ENST00000568292 TRAK1Q9UPV9 953 aa14.88□□□□□ -0.03
CDH3-207ENST00000568292 AHDC1Q5TGY3 1603 aaPredicted RBP14.88□□□□□ -0.03
CDH3-207ENST00000568292 ASXL1Q8IXJ9 1541 aa14.87□□□□□ -0.03
CDH3-207ENST00000568292 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
CDH3-207ENST00000568292 NUTM2FA1L443 756 aa14.87□□□□□ -0.03
CDH3-207ENST00000568292 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDH3-207ENST00000568292 LAMC1P11047 1609 aa14.85□□□□□ -0.03
CDH3-207ENST00000568292 COL16A1Q07092 1604 aaPredicted RBP14.85□□□□□ -0.03
CDH3-207ENST00000568292 SOCS7O14512 581 aa14.85□□□□□ -0.03
CDH3-207ENST00000568292 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
CDH3-207ENST00000568292 MEX3CQ5U5Q3 659 aaKnown RBP14.85□□□□□ -0.03
CDH3-207ENST00000568292 SIN3AQ96ST3 1273 aa14.85□□□□□ -0.03
CDH3-207ENST00000568292 RGS17Q9UGC6 210 aaPredicted RBP14.85□□□□□ -0.03
CDH3-207ENST00000568292 NUTM2BA6NNL0 878 aaPredicted RBP14.84□□□□□ -0.03
CDH3-207ENST00000568292 NUTM2EB1AL46 878 aaPredicted RBP14.84□□□□□ -0.03
CDH3-207ENST00000568292 NUTM2AQ8IVF1 878 aaPredicted RBP14.84□□□□□ -0.03
CDH3-207ENST00000568292 FOXO3O43524 673 aa14.83□□□□□ -0.04
CDH3-207ENST00000568292 L3MBTL2Q969R5 705 aa14.83□□□□□ -0.04
CDH3-207ENST00000568292 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
CDH3-207ENST00000568292 NPHP3Q7Z494 1330 aa14.83□□□□□ -0.04
CDH3-207ENST00000568292 KNDC1Q76NI1 1749 aa14.83□□□□□ -0.04
CDH3-207ENST00000568292 CDC42BPGQ6DT37 1551 aa14.81□□□□□ -0.04
CDH3-207ENST00000568292 DLC1Q96QB1 1528 aa14.81□□□□□ -0.04
CDH3-207ENST00000568292 ADGRB1O14514 1584 aa14.8□□□□□ -0.04
CDH3-207ENST00000568292 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
CDH3-207ENST00000568292 NHSL1Q5SYE7 1610 aa14.79□□□□□ -0.04
CDH3-207ENST00000568292 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
CDH3-207ENST00000568292 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
CDH3-207ENST00000568292 HIRIP3Q9BW71 556 aaPredicted RBP14.79□□□□□ -0.04
CDH3-207ENST00000568292 PHF8Q9UPP1 1060 aa14.79□□□□□ -0.04
CDH3-207ENST00000568292 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
CDH3-207ENST00000568292 PSME1Q06323 249 aa14.78□□□□□ -0.04
CDH3-207ENST00000568292 ZNF772Q68DY9 489 aaPredicted RBP14.78□□□□□ -0.04
CDH3-207ENST00000568292 KRT28Q7Z3Y7 464 aa14.78□□□□□ -0.04
CDH3-207ENST00000568292 WASLO00401 505 aaPredicted RBP14.77□□□□□ -0.05
CDH3-207ENST00000568292 XPCQ01831 940 aaPredicted RBP14.77□□□□□ -0.05
CDH3-207ENST00000568292 SHPRHQ149N8 1683 aa14.77□□□□□ -0.05
CDH3-207ENST00000568292 EIF3AQ14152 1382 aaKnown RBP14.74□□□□□ -0.05
CDH3-207ENST00000568292 LRP6O75581 1613 aa14.74□□□□□ -0.05
CDH3-207ENST00000568292 PMFBP1Q8TBY8 1022 aa14.74□□□□□ -0.05
CDH3-207ENST00000568292 ANKARQ7Z5J8 1434 aa14.74□□□□□ -0.05
CDH3-207ENST00000568292 FMN2Q9NZ56 1722 aa14.73□□□□□ -0.05
CDH3-207ENST00000568292 ADAMTS2O95450 1211 aa14.73□□□□□ -0.05
CDH3-207ENST00000568292 NGLY1Q96IV0 654 aa14.73□□□□□ -0.05
CDH3-207ENST00000568292 C8orf37Q96NL8 207 aa14.73□□□□□ -0.05
CDH3-207ENST00000568292 CDK19Q9BWU1 502 aa14.73□□□□□ -0.05
CDH3-207ENST00000568292 SPATA31A3Q5VYP0 1347 aa14.72□□□□□ -0.05
CDH3-207ENST00000568292 AFF2P51816 1311 aa14.71□□□□□ -0.05
CDH3-207ENST00000568292 PXDNQ92626 1479 aa14.71□□□□□ -0.05
CDH3-207ENST00000568292 NUDT16Q96DE0 195 aaKnown RBP14.71□□□□□ -0.05
CDH3-207ENST00000568292 KIAA1210Q9ULL0 1709 aa14.71□□□□□ -0.05
CDH3-207ENST00000568292 RXRBP28702 533 aa14.7□□□□□ -0.06
CDH3-207ENST00000568292 NGDNQ8NEJ9 315 aaKnown RBP14.7□□□□□ -0.06
CDH3-207ENST00000568292 PRR36Q9H6K5 1346 aa14.69□□□□□ -0.06
CDH3-207ENST00000568292 CENPJQ9HC77 1338 aaPredicted RBP14.69□□□□□ -0.06
CDH3-207ENST00000568292 LMOD2Q6P5Q4 547 aa14.69□□□□□ -0.06
CDH3-207ENST00000568292 QTRT2Q9H974 415 aaKnown RBP14.69□□□□□ -0.06
CDH3-207ENST00000568292 GPRASP1Q5JY77 1395 aa14.69□□□□□ -0.06
CDH3-207ENST00000568292 ADGRB2O60241 1585 aa14.68□□□□□ -0.06
CDH3-207ENST00000568292 KIF1AQ12756 1690 aa14.68□□□□□ -0.06
CDH3-207ENST00000568292 NBPF8Q3BBV2 869 aa14.68□□□□□ -0.06
CDH3-207ENST00000568292 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
CDH3-207ENST00000568292 TONSLQ96HA7 1378 aa14.68□□□□□ -0.06
CDH3-207ENST00000568292 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
CDH3-207ENST00000568292 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
CDH3-207ENST00000568292 TULP4Q9NRJ4 1543 aa14.66□□□□□ -0.06
CDH3-207ENST00000568292 ROCK2O75116 1388 aaKnown RBP14.66□□□□□ -0.06
CDH3-207ENST00000568292 SRPK2P78362 688 aaKnown RBP14.66□□□□□ -0.06
CDH3-207ENST00000568292 FNBP4Q8N3X1 1017 aaPredicted RBP14.66□□□□□ -0.06
CDH3-207ENST00000568292 USP21Q9UK80 565 aa14.66□□□□□ -0.06
CDH3-207ENST00000568292 RGPD8O14715 1765 aaPredicted RBP14.65□□□□□ -0.06
CDH3-207ENST00000568292 ARHGEF28Q8N1W1 1705 aaKnown RBP14.65□□□□□ -0.06
CDH3-207ENST00000568292 ARHGEF10O15013 1369 aa14.64□□□□□ -0.07
CDH3-207ENST00000568292 PLEKHG3A1L390 1219 aa14.64□□□□□ -0.07
CDH3-207ENST00000568292 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
CDH3-207ENST00000568292 RBM6P78332 1123 aaKnown RBP14.64□□□□□ -0.07
CDH3-207ENST00000568292 TNS3Q68CZ2 1445 aa14.64□□□□□ -0.07
CDH3-207ENST00000568292 COL22A1Q8NFW1 1626 aaPredicted RBP14.63□□□□□ -0.07
CDH3-207ENST00000568292 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
CDH3-207ENST00000568292 CABLES1Q8TDN4 633 aa14.63□□□□□ -0.07
CDH3-207ENST00000568292 CARD11Q9BXL7 1154 aa14.63□□□□□ -0.07
CDH3-207ENST00000568292 PCGF6Q9BYE7 350 aa14.63□□□□□ -0.07
CDH3-207ENST00000568292 TRPC5Q9UL62 973 aaPredicted RBP14.63□□□□□ -0.07
CDH3-207ENST00000568292 EVC2Q86UK5 1308 aa14.63□□□□□ -0.07
CDH3-207ENST00000568292 USP32Q8NFA0 1604 aa14.63□□□□□ -0.07
CDH3-207ENST00000568292 CABP2Q9NPB3 220 aa14.62□□□□□ -0.07
CDH3-207ENST00000568292 ACEP12821 1306 aa14.62□□□□□ -0.07
CDH3-207ENST00000568292 TRPM1Q7Z4N2 1603 aa14.59□□□□□ -0.07
CDH3-207ENST00000568292 ATP7BP35670 1465 aa14.59□□□□□ -0.07
CDH3-207ENST00000568292 CABP1Q9NZU7 370 aa14.59□□□□□ -0.07
CDH3-207ENST00000568292 UNC5CLQ8IV45 518 aa14.58□□□□□ -0.08
CDH3-207ENST00000568292 POLR3AO14802 1390 aaPredicted RBP14.58□□□□□ -0.08
CDH3-207ENST00000568292 FAM83GA6ND36 823 aa14.57□□□□□ -0.08
CDH3-207ENST00000568292 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
CDH3-207ENST00000568292 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
CDH3-207ENST00000568292 GJD4Q96KN9 370 aaPredicted RBP14.56□□□□□ -0.08
CDH3-207ENST00000568292 ZNF692Q9BU19 519 aaPredicted RBP14.56□□□□□ -0.08
CDH3-207ENST00000568292 CDK12Q9NYV4 1490 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms