RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ASXL1Q8IXJ9 1541 aa9.96□□□□□ -0.82
ATXN3-250ENST00000568290 ZCCHC11Q5TAX3 1644 aaKnown RBP9.96□□□□□ -0.82
ATXN3-250ENST00000568290 CNGB1Q14028 1251 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-250ENST00000568290 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
ATXN3-250ENST00000568290 IFNL1Q8IU54 200 aa9.95□□□□□ -0.82
ATXN3-250ENST00000568290 DEPDC5O75140 1603 aa9.94□□□□□ -0.82
ATXN3-250ENST00000568290 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
ATXN3-250ENST00000568290 CEP152O94986 1710 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 MADDQ8WXG6 1647 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 CFAP74Q9C0B2 1584 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 DISP3Q9P2K9 1392 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 E9PSI1 815 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 CLCN6P51797 869 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 ZNF467Q7Z7K2 595 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-250ENST00000568290 MS4A3Q96HJ5 214 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
ATXN3-250ENST00000568290 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
ATXN3-250ENST00000568290 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
ATXN3-250ENST00000568290 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
ATXN3-250ENST00000568290 CFAP53Q96M91 514 aa9.92□□□□□ -0.82
ATXN3-250ENST00000568290 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
ATXN3-250ENST00000568290 IQGAP1P46940 1657 aa9.92□□□□□ -0.82
ATXN3-250ENST00000568290 FANCAO15360 1455 aa9.91□□□□□ -0.82
ATXN3-250ENST00000568290 KDM5AP29375 1690 aaKnown RBP9.91□□□□□ -0.82
ATXN3-250ENST00000568290 VWDEQ8N2E2 1590 aa9.91□□□□□ -0.82
ATXN3-250ENST00000568290 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
ATXN3-250ENST00000568290 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.82
ATXN3-250ENST00000568290 CGNL1Q0VF96 1302 aa9.9□□□□□ -0.82
ATXN3-250ENST00000568290 VGFO15240 615 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-250ENST00000568290 GALR2O43603 387 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-250ENST00000568290 PDE4AP27815 886 aa9.9□□□□□ -0.82
ATXN3-250ENST00000568290 EXOC6Q8TAG9 804 aa9.9□□□□□ -0.82
ATXN3-250ENST00000568290 BACH2Q9BYV9 841 aa9.9□□□□□ -0.82
ATXN3-250ENST00000568290 PNNQ9H307 717 aaKnown RBP9.9□□□□□ -0.82
ATXN3-250ENST00000568290 ADGRL1O94910 1474 aa9.9□□□□□ -0.83
ATXN3-250ENST00000568290 ZNF518AQ6AHZ1 1483 aa9.9□□□□□ -0.83
ATXN3-250ENST00000568290 NSD2O96028 1365 aa9.89□□□□□ -0.83
ATXN3-250ENST00000568290 ABCA9Q8IUA7 1624 aa9.89□□□□□ -0.83
ATXN3-250ENST00000568290 KIF3BO15066 747 aa9.89□□□□□ -0.83
ATXN3-250ENST00000568290 PDE3AQ14432 1141 aa9.89□□□□□ -0.83
ATXN3-250ENST00000568290 TRPC6Q9Y210 931 aa9.89□□□□□ -0.83
ATXN3-250ENST00000568290 INO80Q9ULG1 1556 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-250ENST00000568290 SETBP1Q9Y6X0 1596 aa9.88□□□□□ -0.83
ATXN3-250ENST00000568290 GABBR2O75899 941 aa9.88□□□□□ -0.83
ATXN3-250ENST00000568290 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-250ENST00000568290 DNAJC5Q9H3Z4 198 aa9.88□□□□□ -0.83
ATXN3-250ENST00000568290 ADAMTS8Q9UP79 889 aa9.88□□□□□ -0.83
ATXN3-250ENST00000568290 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-250ENST00000568290 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
ATXN3-250ENST00000568290 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
ATXN3-250ENST00000568290 NKTRP30414 1462 aaKnown RBP9.87□□□□□ -0.83
ATXN3-250ENST00000568290 EIF5BO60841 1220 aaKnown RBP9.87□□□□□ -0.83
ATXN3-250ENST00000568290 SP7Q8TDD2 431 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-250ENST00000568290 KIF1BO60333 1816 aa9.86□□□□□ -0.83
ATXN3-250ENST00000568290 CENPJQ9HC77 1338 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-250ENST00000568290 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
ATXN3-250ENST00000568290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-250ENST00000568290 SLFN5Q08AF3 891 aa9.86□□□□□ -0.83
ATXN3-250ENST00000568290 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
ATXN3-250ENST00000568290 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
ATXN3-250ENST00000568290 ZFP91Q96JP5 570 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-250ENST00000568290 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
ATXN3-250ENST00000568290 PDAP1Q13442 181 aaKnown RBP9.85□□□□□ -0.83
ATXN3-250ENST00000568290 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
ATXN3-250ENST00000568290 AFAP1Q8N556 730 aa9.85□□□□□ -0.83
ATXN3-250ENST00000568290 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
ATXN3-250ENST00000568290 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
ATXN3-250ENST00000568290 UPF2Q9HAU5 1272 aaKnown RBP9.85□□□□□ -0.83
ATXN3-250ENST00000568290 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-250ENST00000568290 EFCAB6Q5THR3 1501 aa9.85□□□□□ -0.83
ATXN3-250ENST00000568290 ZNF521Q96K83 1311 aa9.84□□□□□ -0.83
ATXN3-250ENST00000568290 WDR63Q8IWG1 891 aa9.84□□□□□ -0.83
ATXN3-250ENST00000568290 CRBNQ96SW2 442 aa9.84□□□□□ -0.83
ATXN3-250ENST00000568290 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
ATXN3-250ENST00000568290 CLTCL1P53675 1640 aa9.84□□□□□ -0.83
ATXN3-250ENST00000568290 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
ATXN3-250ENST00000568290 NRXN1Q9ULB1 1477 aa9.84□□□□□ -0.83
ATXN3-250ENST00000568290 EVC2Q86UK5 1308 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 DEKP35659 375 aaKnown RBP9.83□□□□□ -0.84
ATXN3-250ENST00000568290 PSEN1P49768 467 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 BECN1Q14457 450 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 CCDC27Q2M243 656 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 TRMT2AQ8IZ69 625 aaKnown RBP9.83□□□□□ -0.84
ATXN3-250ENST00000568290 RUNDC1Q96C34 613 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 BCL11AQ9H165 835 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 MLH3Q9UHC1 1453 aa9.83□□□□□ -0.84
ATXN3-250ENST00000568290 TIE1P35590 1138 aa9.82□□□□□ -0.84
ATXN3-250ENST00000568290 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
ATXN3-250ENST00000568290 NEFMP07197 916 aa9.81□□□□□ -0.84
ATXN3-250ENST00000568290 C14orf93Q9H972 538 aaKnown RBP9.81□□□□□ -0.84
ATXN3-250ENST00000568290 ASXL2Q76L83 1435 aa9.81□□□□□ -0.84
ATXN3-250ENST00000568290 NEO1Q92859 1461 aa9.8□□□□□ -0.84
ATXN3-250ENST00000568290 NPM2Q86SE8 214 aaKnown RBP9.8□□□□□ -0.84
ATXN3-250ENST00000568290 BMP2KQ9NSY1 1161 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-250ENST00000568290 SLC52A1Q9NWF4 448 aa9.8□□□□□ -0.84
ATXN3-250ENST00000568290 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
ATXN3-250ENST00000568290 ERVK-7P63135 1459 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms