RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 KCNA6P17658 529 aa25.84■■□□□ 1.73
EDC3-214ENST00000568176 SIRT1Q96EB6 747 aa25.84■■□□□ 1.73
EDC3-214ENST00000568176 PTCH1Q13635 1447 aa25.82■■□□□ 1.72
EDC3-214ENST00000568176 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.82■■□□□ 1.72
EDC3-214ENST00000568176 STRCP1A6NGW2 1772 aa25.78■■□□□ 1.72
EDC3-214ENST00000568176 NWD1Q149M9 1564 aa25.78■■□□□ 1.72
EDC3-214ENST00000568176 MYOM1P52179 1685 aa25.78■■□□□ 1.72
EDC3-214ENST00000568176 EVC2Q86UK5 1308 aa25.75■■□□□ 1.71
EDC3-214ENST00000568176 SLC24A1O60721 1099 aa25.74■■□□□ 1.71
EDC3-214ENST00000568176 CABP2Q9NPB3 220 aa25.74■■□□□ 1.71
EDC3-214ENST00000568176 RBM33Q96EV2 1170 aaKnown RBP25.73■■□□□ 1.71
EDC3-214ENST00000568176 CDCA8Q53HL2 280 aa25.72■■□□□ 1.71
EDC3-214ENST00000568176 CDK19Q9BWU1 502 aa25.72■■□□□ 1.71
EDC3-214ENST00000568176 ADGRB2O60241 1585 aa25.71■■□□□ 1.71
EDC3-214ENST00000568176 NALCNQ8IZF0 1738 aa25.68■■□□□ 1.7
EDC3-214ENST00000568176 WASLO00401 505 aaPredicted RBP25.68■■□□□ 1.7
EDC3-214ENST00000568176 SRPK2P78362 688 aaKnown RBP25.68■■□□□ 1.7
EDC3-214ENST00000568176 NKTRP30414 1462 aaKnown RBP25.65■■□□□ 1.7
EDC3-214ENST00000568176 PUS7Q96PZ0 661 aaKnown RBP25.65■■□□□ 1.7
EDC3-214ENST00000568176 SLC12A5Q9H2X9 1139 aa25.63■■□□□ 1.69
EDC3-214ENST00000568176 PANK3Q9H999 370 aa25.63■■□□□ 1.69
EDC3-214ENST00000568176 ZNF335Q9H4Z2 1342 aaPredicted RBP25.63■■□□□ 1.69
EDC3-214ENST00000568176 PROSER2Q86WR7 435 aaPredicted RBP25.62■■□□□ 1.69
EDC3-214ENST00000568176 PRR36Q9H6K5 1346 aa25.61■■□□□ 1.69
EDC3-214ENST00000568176 TMC1Q8TDI8 760 aa25.6■■□□□ 1.69
EDC3-214ENST00000568176 USP32Q8NFA0 1604 aa25.59■■□□□ 1.69
EDC3-214ENST00000568176 ADGRL3Q9HAR2 1447 aa25.59■■□□□ 1.69
EDC3-214ENST00000568176 MIER1Q8N108 512 aa25.59■■□□□ 1.69
EDC3-214ENST00000568176 ATAD2Q6PL18 1390 aa25.59■■□□□ 1.69
EDC3-214ENST00000568176 ATP7BP35670 1465 aa25.59■■□□□ 1.69
EDC3-214ENST00000568176 NUTM2FA1L443 756 aa25.58■■□□□ 1.69
EDC3-214ENST00000568176 PER1O15534 1290 aaPredicted RBP25.58■■□□□ 1.69
EDC3-214ENST00000568176 DMRT2Q9Y5R5 561 aa25.58■■□□□ 1.68
EDC3-214ENST00000568176 XIRP1Q702N8 1843 aaKnown RBP25.58■■□□□ 1.68
EDC3-214ENST00000568176 RGPD8O14715 1765 aaPredicted RBP25.57■■□□□ 1.68
EDC3-214ENST00000568176 FMN2Q9NZ56 1722 aa25.57■■□□□ 1.68
EDC3-214ENST00000568176 NUDT16Q96DE0 195 aaKnown RBP25.57■■□□□ 1.68
EDC3-214ENST00000568176 TMEM94Q12767 1356 aa25.56■■□□□ 1.68
EDC3-214ENST00000568176 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
EDC3-214ENST00000568176 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
EDC3-214ENST00000568176 CARD14Q9BXL6 1004 aa25.55■■□□□ 1.68
EDC3-214ENST00000568176 CD163L1Q9NR16 1453 aa25.55■■□□□ 1.68
EDC3-214ENST00000568176 TOPAZ1Q8N9V7 1692 aa25.54■■□□□ 1.68
EDC3-214ENST00000568176 CABP1Q9NZU7 370 aa25.54■■□□□ 1.68
EDC3-214ENST00000568176 PPIP5K1Q6PFW1 1433 aa25.52■■□□□ 1.68
EDC3-214ENST00000568176 C14orf37Q86TY3 774 aa25.52■■□□□ 1.68
EDC3-214ENST00000568176 LRRC7Q96NW7 1537 aa25.52■■□□□ 1.68
EDC3-214ENST00000568176 NINLQ9Y2I6 1382 aa25.5■■□□□ 1.67
EDC3-214ENST00000568176 CNGB1Q14028 1251 aaPredicted RBP25.5■■□□□ 1.67
EDC3-214ENST00000568176 CCDC61Q9Y6R9 512 aa25.5■■□□□ 1.67
EDC3-214ENST00000568176 A0A1W2PP64 1363 aa25.5■■□□□ 1.67
EDC3-214ENST00000568176 ANKRD36BQ8N2N9 1353 aa25.49■■□□□ 1.67
EDC3-214ENST00000568176 NCOA3Q9Y6Q9 1424 aa25.46■■□□□ 1.67
EDC3-214ENST00000568176 ANP32CO43423 234 aa25.46■■□□□ 1.67
EDC3-214ENST00000568176 C19orf44Q9H6X5 657 aa25.46■■□□□ 1.67
EDC3-214ENST00000568176 ITSN1Q15811 1721 aa25.46■■□□□ 1.67
EDC3-214ENST00000568176 ANKARQ7Z5J8 1434 aa25.45■■□□□ 1.67
EDC3-214ENST00000568176 NSD3Q9BZ95 1437 aa25.45■■□□□ 1.67
EDC3-214ENST00000568176 AKAP12Q02952 1782 aa25.44■■□□□ 1.66
EDC3-214ENST00000568176 AMER1Q5JTC6 1135 aaPredicted RBP25.44■■□□□ 1.66
EDC3-214ENST00000568176 PRKRIP1Q9H875 184 aaPredicted RBP25.44■■□□□ 1.66
EDC3-214ENST00000568176 KNSTRNQ9Y448 316 aa25.44■■□□□ 1.66
EDC3-214ENST00000568176 CPSF1Q10570 1443 aaKnown RBP25.43■■□□□ 1.66
EDC3-214ENST00000568176 TERF2IPQ9NYB0 399 aa25.42■■□□□ 1.66
EDC3-214ENST00000568176 LTBP4Q8N2S1 1624 aa25.42■■□□□ 1.66
EDC3-214ENST00000568176 PLEKHG3A1L390 1219 aa25.42■■□□□ 1.66
EDC3-214ENST00000568176 CC2D1BQ5T0F9 858 aaKnown RBP25.42■■□□□ 1.66
EDC3-214ENST00000568176 PMFBP1Q8TBY8 1022 aa25.4■■□□□ 1.66
EDC3-214ENST00000568176 MON2Q7Z3U7 1717 aa25.4■■□□□ 1.66
EDC3-214ENST00000568176 ACEP12821 1306 aa25.39■■□□□ 1.66
EDC3-214ENST00000568176 HDGFL2Q7Z4V5 671 aaPredicted RBP25.39■■□□□ 1.65
EDC3-214ENST00000568176 DCCP43146 1447 aa25.38■■□□□ 1.65
EDC3-214ENST00000568176 MST1RQ04912 1400 aa25.37■■□□□ 1.65
EDC3-214ENST00000568176 MSH6P52701 1360 aa25.37■■□□□ 1.65
EDC3-214ENST00000568176 KTN1Q86UP2 1357 aaKnown RBP25.37■■□□□ 1.65
EDC3-214ENST00000568176 C1orf167Q5SNV9 1468 aa25.36■■□□□ 1.65
EDC3-214ENST00000568176 ATF3P18847 181 aa25.35■■□□□ 1.65
EDC3-214ENST00000568176 POLR3AO14802 1390 aaPredicted RBP25.35■■□□□ 1.65
EDC3-214ENST00000568176 PARD3Q8TEW0 1356 aa25.35■■□□□ 1.65
EDC3-214ENST00000568176 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
EDC3-214ENST00000568176 NPC1L1Q9UHC9 1359 aa25.34■■□□□ 1.65
EDC3-214ENST00000568176 NRKQ7Z2Y5 1582 aa25.34■■□□□ 1.65
EDC3-214ENST00000568176 ESCO1Q5FWF5 840 aa25.33■■□□□ 1.65
EDC3-214ENST00000568176 PHF8Q9UPP1 1060 aa25.33■■□□□ 1.64
EDC3-214ENST00000568176 EDC4Q6P2E9 1401 aaKnown RBP25.32■■□□□ 1.64
EDC3-214ENST00000568176 CADPS2Q86UW7 1296 aa25.31■■□□□ 1.64
EDC3-214ENST00000568176 USP6P35125 1406 aa25.31■■□□□ 1.64
EDC3-214ENST00000568176 KIF20BQ96Q89 1820 aa25.31■■□□□ 1.64
EDC3-214ENST00000568176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.3■■□□□ 1.64
EDC3-214ENST00000568176 NGDNQ8NEJ9 315 aaKnown RBP25.3■■□□□ 1.64
EDC3-214ENST00000568176 ZNF692Q9BU19 519 aaPredicted RBP25.3■■□□□ 1.64
EDC3-214ENST00000568176 CGNL1Q0VF96 1302 aa25.3■■□□□ 1.64
EDC3-214ENST00000568176 CCDC184Q52MB2 194 aa25.3■■□□□ 1.64
EDC3-214ENST00000568176 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
EDC3-214ENST00000568176 FYB1O15117 783 aa25.29■■□□□ 1.64
EDC3-214ENST00000568176 RALBP1Q15311 655 aa25.28■■□□□ 1.64
EDC3-214ENST00000568176 GGNBP2Q9H3C7 697 aa25.27■■□□□ 1.64
EDC3-214ENST00000568176 ANKRD26Q9UPS8 1709 aa25.26■■□□□ 1.63
EDC3-214ENST00000568176 NME9Q86XW9 330 aa25.26■■□□□ 1.63
EDC3-214ENST00000568176 TTC21BQ7Z4L5 1316 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms