RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ANKRD30BQ9BXX2 1392 aa7.09□□□□□ -1.27
CLK3-219ENST00000567805 LAMC1P11047 1609 aa7.09□□□□□ -1.27
CLK3-219ENST00000567805 NHSL1Q5SYE7 1610 aa7.09□□□□□ -1.27
CLK3-219ENST00000567805 SHPRHQ149N8 1683 aa7.09□□□□□ -1.27
CLK3-219ENST00000567805 ASXL1Q8IXJ9 1541 aa7.08□□□□□ -1.28
CLK3-219ENST00000567805 RGL3Q3MIN7 710 aa7.08□□□□□ -1.28
CLK3-219ENST00000567805 PIK3C2GO75747 1445 aa7.08□□□□□ -1.28
CLK3-219ENST00000567805 MST1RQ04912 1400 aa7.08□□□□□ -1.28
CLK3-219ENST00000567805 MYOM2P54296 1465 aa7.07□□□□□ -1.28
CLK3-219ENST00000567805 SOCS7O14512 581 aa7.07□□□□□ -1.28
CLK3-219ENST00000567805 HRCP23327 699 aa7.07□□□□□ -1.28
CLK3-219ENST00000567805 ROBO2Q9HCK4 1378 aa7.07□□□□□ -1.28
CLK3-219ENST00000567805 JCADQ9P266 1359 aa7.07□□□□□ -1.28
CLK3-219ENST00000567805 ADGRF5Q8IZF2 1346 aa7.06□□□□□ -1.28
CLK3-219ENST00000567805 BRINP3Q76B58 766 aa7.06□□□□□ -1.28
CLK3-219ENST00000567805 TECPR2O15040 1411 aa7.06□□□□□ -1.28
CLK3-219ENST00000567805 CDC42BPGQ6DT37 1551 aa7.06□□□□□ -1.28
CLK3-219ENST00000567805 NRXN1Q9ULB1 1477 aa7.05□□□□□ -1.28
CLK3-219ENST00000567805 PIP4P2Q8N4L2 257 aa7.05□□□□□ -1.28
CLK3-219ENST00000567805 C1orf167Q5SNV9 1468 aa7.04□□□□□ -1.28
CLK3-219ENST00000567805 AKT1S1Q96B36 256 aa7.04□□□□□ -1.28
CLK3-219ENST00000567805 LRPPRCP42704 1394 aaKnown RBP7.04□□□□□ -1.28
CLK3-219ENST00000567805 ABCC11Q96J66 1382 aa7.04□□□□□ -1.28
CLK3-219ENST00000567805 SPATA31A6Q5VVP1 1343 aa7.03□□□□□ -1.28
CLK3-219ENST00000567805 YTHDC2Q9H6S0 1430 aaKnown RBP7.03□□□□□ -1.28
CLK3-219ENST00000567805 RGS17Q9UGC6 210 aaPredicted RBP7.03□□□□□ -1.28
CLK3-219ENST00000567805 FMN2Q9NZ56 1722 aa7.03□□□□□ -1.28
CLK3-219ENST00000567805 LRP6O75581 1613 aa7.02□□□□□ -1.29
CLK3-219ENST00000567805 HAX1O00165 279 aa7.02□□□□□ -1.29
CLK3-219ENST00000567805 ZBTB22O15209 634 aa7.02□□□□□ -1.29
CLK3-219ENST00000567805 TMEM132EQ6IEE7 984 aa7.02□□□□□ -1.29
CLK3-219ENST00000567805 C14orf93Q9H972 538 aaKnown RBP7.02□□□□□ -1.29
CLK3-219ENST00000567805 RGPD8O14715 1765 aaPredicted RBP7.02□□□□□ -1.29
CLK3-219ENST00000567805 DLC1Q96QB1 1528 aa7.01□□□□□ -1.29
CLK3-219ENST00000567805 KIF1AQ12756 1690 aa7.01□□□□□ -1.29
CLK3-219ENST00000567805 DHX57Q6P158 1386 aaKnown RBP7.01□□□□□ -1.29
CLK3-219ENST00000567805 REM2Q8IYK8 340 aaPredicted RBP7.01□□□□□ -1.29
CLK3-219ENST00000567805 LRRC59Q96AG4 307 aaKnown RBP7.01□□□□□ -1.29
CLK3-219ENST00000567805 SIRT1Q96EB6 747 aa7.01□□□□□ -1.29
CLK3-219ENST00000567805 STAC3Q96MF2 364 aa7.01□□□□□ -1.29
CLK3-219ENST00000567805 STK26Q9P289 416 aa7.01□□□□□ -1.29
CLK3-219ENST00000567805 COL22A1Q8NFW1 1626 aaPredicted RBP7.01□□□□□ -1.29
CLK3-219ENST00000567805 ADGRB1O14514 1584 aa7□□□□□ -1.29
CLK3-219ENST00000567805 PLEKHH1Q9ULM0 1364 aa7□□□□□ -1.29
CLK3-219ENST00000567805 CFAP70Q5T0N1 1121 aa7□□□□□ -1.29
CLK3-219ENST00000567805 WAPLQ7Z5K2 1190 aa7□□□□□ -1.29
CLK3-219ENST00000567805 KIAA1210Q9ULL0 1709 aa7□□□□□ -1.29
CLK3-219ENST00000567805 ADGRB2O60241 1585 aa6.99□□□□□ -1.29
CLK3-219ENST00000567805 ARHGEF28Q8N1W1 1705 aaKnown RBP6.99□□□□□ -1.29
CLK3-219ENST00000567805 MARF1Q9Y4F3 1742 aaKnown RBP6.99□□□□□ -1.29
CLK3-219ENST00000567805 PNPLA6Q8IY17 1366 aa6.99□□□□□ -1.29
CLK3-219ENST00000567805 MEX3CQ5U5Q3 659 aaKnown RBP6.99□□□□□ -1.29
CLK3-219ENST00000567805 POTEAQ6S8J7 498 aa6.99□□□□□ -1.29
CLK3-219ENST00000567805 DCAF11Q8TEB1 546 aa6.99□□□□□ -1.29
CLK3-219ENST00000567805 DDX17Q92841 729 aaKnown RBP6.99□□□□□ -1.29
CLK3-219ENST00000567805 ORAI2Q96SN7 254 aa6.99□□□□□ -1.29
CLK3-219ENST00000567805 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
CLK3-219ENST00000567805 NPHP3Q7Z494 1330 aa6.99□□□□□ -1.29
CLK3-219ENST00000567805 PXDNQ92626 1479 aa6.98□□□□□ -1.29
CLK3-219ENST00000567805 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
CLK3-219ENST00000567805 USP32Q8NFA0 1604 aa6.98□□□□□ -1.29
CLK3-219ENST00000567805 NUTM2BA6NNL0 878 aaPredicted RBP6.97□□□□□ -1.29
CLK3-219ENST00000567805 NUTM2EB1AL46 878 aaPredicted RBP6.97□□□□□ -1.29
CLK3-219ENST00000567805 MYCNP04198 464 aaPredicted RBP6.97□□□□□ -1.29
CLK3-219ENST00000567805 EVX2Q03828 476 aa6.97□□□□□ -1.29
CLK3-219ENST00000567805 ITSN1Q15811 1721 aa6.97□□□□□ -1.29
CLK3-219ENST00000567805 ZNF772Q68DY9 489 aaPredicted RBP6.97□□□□□ -1.29
CLK3-219ENST00000567805 NUTM2AQ8IVF1 878 aaPredicted RBP6.97□□□□□ -1.29
CLK3-219ENST00000567805 PRAM1Q96QH2 718 aa6.97□□□□□ -1.29
CLK3-219ENST00000567805 KDM2AQ9Y2K7 1162 aa6.97□□□□□ -1.29
CLK3-219ENST00000567805 NUTM2FA1L443 756 aa6.96□□□□□ -1.3
CLK3-219ENST00000567805 POGKQ9P215 609 aa6.96□□□□□ -1.3
CLK3-219ENST00000567805 ANKARQ7Z5J8 1434 aa6.95□□□□□ -1.3
CLK3-219ENST00000567805 FOXO3O43524 673 aa6.95□□□□□ -1.3
CLK3-219ENST00000567805 SAFB2Q14151 953 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLK3-219ENST00000567805 C8orf37Q96NL8 207 aa6.95□□□□□ -1.3
CLK3-219ENST00000567805 TRAK1Q9UPV9 953 aa6.95□□□□□ -1.3
CLK3-219ENST00000567805 TULP4Q9NRJ4 1543 aa6.95□□□□□ -1.3
CLK3-219ENST00000567805 AFF2P51816 1311 aa6.95□□□□□ -1.3
CLK3-219ENST00000567805 EIF3AQ14152 1382 aaKnown RBP6.95□□□□□ -1.3
CLK3-219ENST00000567805 CDK12Q9NYV4 1490 aaPredicted RBP6.94□□□□□ -1.3
CLK3-219ENST00000567805 ABCA3Q99758 1704 aa6.94□□□□□ -1.3
CLK3-219ENST00000567805 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.94□□□□□ -1.3
CLK3-219ENST00000567805 TRPM3Q9HCF6 1732 aaPredicted RBP6.94□□□□□ -1.3
CLK3-219ENST00000567805 FXR2P51116 673 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLK3-219ENST00000567805 PHF8Q9UPP1 1060 aa6.94□□□□□ -1.3
CLK3-219ENST00000567805 PITPNM1O00562 1244 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 ADAMTS2O95450 1211 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 RXRBP28702 533 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
CLK3-219ENST00000567805 PLSCR2Q9NRY7 297 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 ATF5Q9Y2D1 282 aaPredicted RBP6.93□□□□□ -1.3
CLK3-219ENST00000567805 SPATA31A3Q5VYP0 1347 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 TRPM1Q7Z4N2 1603 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 TOPAZ1Q8N9V7 1692 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 ALS2Q96Q42 1657 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 QRICH2Q9H0J4 1663 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 TNS3Q68CZ2 1445 aa6.93□□□□□ -1.3
CLK3-219ENST00000567805 WASLO00401 505 aaPredicted RBP6.92□□□□□ -1.3
CLK3-219ENST00000567805 PSME1Q06323 249 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms