RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 PLEKHH1Q9ULM0 1364 aa21.58■■□□□ 1.04
COMMD4-219ENST00000567399 KNDC1Q76NI1 1749 aa21.58■■□□□ 1.04
COMMD4-219ENST00000567399 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.57■■□□□ 1.04
COMMD4-219ENST00000567399 DLC1Q96QB1 1528 aa21.54■■□□□ 1.04
COMMD4-219ENST00000567399 DCCP43146 1447 aa21.54■■□□□ 1.04
COMMD4-219ENST00000567399 CARD11Q9BXL7 1154 aa21.53■■□□□ 1.04
COMMD4-219ENST00000567399 MINK1Q8N4C8 1332 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-219ENST00000567399 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.04
COMMD4-219ENST00000567399 TRPM1Q7Z4N2 1603 aa21.52■■□□□ 1.04
COMMD4-219ENST00000567399 NUTM2FA1L443 756 aa21.51■■□□□ 1.03
COMMD4-219ENST00000567399 HIRIP3Q9BW71 556 aaPredicted RBP21.51■■□□□ 1.03
COMMD4-219ENST00000567399 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
COMMD4-219ENST00000567399 HSPA1LP34931 641 aa21.47■■□□□ 1.03
COMMD4-219ENST00000567399 CENPJQ9HC77 1338 aaPredicted RBP21.47■■□□□ 1.03
COMMD4-219ENST00000567399 ESCO1Q5FWF5 840 aa21.46■■□□□ 1.03
COMMD4-219ENST00000567399 MST1RQ04912 1400 aa21.46■■□□□ 1.03
COMMD4-219ENST00000567399 RALGAPBQ86X10 1494 aa21.45■■□□□ 1.03
COMMD4-219ENST00000567399 ROBO1Q9Y6N7 1651 aa21.44■■□□□ 1.02
COMMD4-219ENST00000567399 ARHGEF28Q8N1W1 1705 aaKnown RBP21.44■■□□□ 1.02
COMMD4-219ENST00000567399 BRINP3Q76B58 766 aa21.44■■□□□ 1.02
COMMD4-219ENST00000567399 CDC42BPGQ6DT37 1551 aa21.44■■□□□ 1.02
COMMD4-219ENST00000567399 C1orf167Q5SNV9 1468 aa21.43■■□□□ 1.02
COMMD4-219ENST00000567399 WASLO00401 505 aaPredicted RBP21.42■■□□□ 1.02
COMMD4-219ENST00000567399 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
COMMD4-219ENST00000567399 ORAI2Q96SN7 254 aa21.42■■□□□ 1.02
COMMD4-219ENST00000567399 SRPK2P78362 688 aaKnown RBP21.39■■□□□ 1.01
COMMD4-219ENST00000567399 CDK19Q9BWU1 502 aa21.39■■□□□ 1.01
COMMD4-219ENST00000567399 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
COMMD4-219ENST00000567399 FMN2Q9NZ56 1722 aa21.35■■□□□ 1.01
COMMD4-219ENST00000567399 EVC2Q86UK5 1308 aa21.35■■□□□ 1.01
COMMD4-219ENST00000567399 DDX17Q92841 729 aaKnown RBP21.35■■□□□ 1.01
COMMD4-219ENST00000567399 NUDT16Q96DE0 195 aaKnown RBP21.34■■□□□ 1.01
COMMD4-219ENST00000567399 PHF8Q9UPP1 1060 aa21.34■■□□□ 1.01
COMMD4-219ENST00000567399 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
COMMD4-219ENST00000567399 FOXO3O43524 673 aa21.33■■□□□ 1.01
COMMD4-219ENST00000567399 PHLPP1O60346 1717 aa21.32■■□□□ 1
COMMD4-219ENST00000567399 ANKARQ7Z5J8 1434 aa21.32■■□□□ 1
COMMD4-219ENST00000567399 ST20-MTHFSA0A0A6YYL1 179 aa21.32■■□□□ 1
COMMD4-219ENST00000567399 PMFBP1Q8TBY8 1022 aa21.32■■□□□ 1
COMMD4-219ENST00000567399 CABP2Q9NPB3 220 aa21.32■■□□□ 1
COMMD4-219ENST00000567399 NPHP3Q7Z494 1330 aa21.31■■□□□ 1
COMMD4-219ENST00000567399 USP47Q96K76 1375 aa21.31■■□□□ 1
COMMD4-219ENST00000567399 TULP4Q9NRJ4 1543 aa21.3■■□□□ 1
COMMD4-219ENST00000567399 SLC24A1O60721 1099 aa21.3■■□□□ 1
COMMD4-219ENST00000567399 PSME1Q06323 249 aa21.3■■□□□ 1
COMMD4-219ENST00000567399 NGDNQ8NEJ9 315 aaKnown RBP21.3■■□□□ 1
COMMD4-219ENST00000567399 XPCQ01831 940 aaPredicted RBP21.29■■□□□ 1
COMMD4-219ENST00000567399 LRRC59Q96AG4 307 aaKnown RBP21.29■■□□□ 1
COMMD4-219ENST00000567399 PRR36Q9H6K5 1346 aa21.29■■□□□ 1
COMMD4-219ENST00000567399 CCDC61Q9Y6R9 512 aa21.28■■□□□ 1
COMMD4-219ENST00000567399 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
COMMD4-219ENST00000567399 RGPD8O14715 1765 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-219ENST00000567399 KRT28Q7Z3Y7 464 aa21.26■□□□□ 0.99
COMMD4-219ENST00000567399 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
COMMD4-219ENST00000567399 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
COMMD4-219ENST00000567399 JCADQ9P266 1359 aa21.24■□□□□ 0.99
COMMD4-219ENST00000567399 NHSL1Q5SYE7 1610 aa21.24■□□□□ 0.99
COMMD4-219ENST00000567399 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
COMMD4-219ENST00000567399 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
COMMD4-219ENST00000567399 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-219ENST00000567399 COL16A1Q07092 1604 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-219ENST00000567399 ATP7BP35670 1465 aa21.22■□□□□ 0.99
COMMD4-219ENST00000567399 TMF1P82094 1093 aa21.22■□□□□ 0.99
COMMD4-219ENST00000567399 LMOD2Q6P5Q4 547 aa21.22■□□□□ 0.99
COMMD4-219ENST00000567399 CABP1Q9NZU7 370 aa21.21■□□□□ 0.99
COMMD4-219ENST00000567399 PPIP5K1Q6PFW1 1433 aa21.21■□□□□ 0.99
COMMD4-219ENST00000567399 PAK3O75914 559 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-219ENST00000567399 TMC1Q8TDI8 760 aa21.2■□□□□ 0.98
COMMD4-219ENST00000567399 ITSN1Q15811 1721 aa21.2■□□□□ 0.98
COMMD4-219ENST00000567399 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
COMMD4-219ENST00000567399 PLEKHG3A1L390 1219 aa21.19■□□□□ 0.98
COMMD4-219ENST00000567399 NUTM2BA6NNL0 878 aaPredicted RBP21.19■□□□□ 0.98
COMMD4-219ENST00000567399 NUTM2EB1AL46 878 aaPredicted RBP21.19■□□□□ 0.98
COMMD4-219ENST00000567399 NUTM2AQ8IVF1 878 aaPredicted RBP21.19■□□□□ 0.98
COMMD4-219ENST00000567399 TESK2Q96S53 571 aa21.19■□□□□ 0.98
COMMD4-219ENST00000567399 ACEP12821 1306 aa21.19■□□□□ 0.98
COMMD4-219ENST00000567399 HSPA5P11021 654 aaKnown RBP21.18■□□□□ 0.98
COMMD4-219ENST00000567399 CDCA8Q53HL2 280 aa21.18■□□□□ 0.98
COMMD4-219ENST00000567399 PLEKHG5O94827 1062 aa21.17■□□□□ 0.98
COMMD4-219ENST00000567399 PXDNQ92626 1479 aa21.16■□□□□ 0.98
COMMD4-219ENST00000567399 SPATA31A6Q5VVP1 1343 aa21.16■□□□□ 0.98
COMMD4-219ENST00000567399 MEX3CQ5U5Q3 659 aaKnown RBP21.16■□□□□ 0.98
COMMD4-219ENST00000567399 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
COMMD4-219ENST00000567399 SPATA31A3Q5VYP0 1347 aa21.14■□□□□ 0.97
COMMD4-219ENST00000567399 HAP1P54257 671 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-219ENST00000567399 PUS7Q96PZ0 661 aaKnown RBP21.14■□□□□ 0.97
COMMD4-219ENST00000567399 SBNO1A3KN83 1393 aa21.13■□□□□ 0.97
COMMD4-219ENST00000567399 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-219ENST00000567399 PNPLA6Q8IY17 1366 aa21.12■□□□□ 0.97
COMMD4-219ENST00000567399 ZNF692Q9BU19 519 aaPredicted RBP21.12■□□□□ 0.97
COMMD4-219ENST00000567399 TOPAZ1Q8N9V7 1692 aa21.12■□□□□ 0.97
COMMD4-219ENST00000567399 POLR3AO14802 1390 aaPredicted RBP21.11■□□□□ 0.97
COMMD4-219ENST00000567399 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
COMMD4-219ENST00000567399 TNS3Q68CZ2 1445 aa21.11■□□□□ 0.97
COMMD4-219ENST00000567399 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
COMMD4-219ENST00000567399 SHPRHQ149N8 1683 aa21.1■□□□□ 0.97
COMMD4-219ENST00000567399 SLC12A5Q9H2X9 1139 aa21.1■□□□□ 0.97
COMMD4-219ENST00000567399 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
COMMD4-219ENST00000567399 ARHGEF10O15013 1369 aa21.1■□□□□ 0.97
COMMD4-219ENST00000567399 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms