RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 POGKQ9P215 609 aa14.79□□□□□ -0.04
HMGN2P40-201ENST00000566875 PPLO60437 1756 aa14.78□□□□□ -0.04
HMGN2P40-201ENST00000566875 ASXL1Q8IXJ9 1541 aa14.78□□□□□ -0.04
HMGN2P40-201ENST00000566875 PIK3C2GO75747 1445 aa14.78□□□□□ -0.04
HMGN2P40-201ENST00000566875 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
HMGN2P40-201ENST00000566875 FOXO3O43524 673 aa14.78□□□□□ -0.04
HMGN2P40-201ENST00000566875 TECPR2O15040 1411 aa14.77□□□□□ -0.04
HMGN2P40-201ENST00000566875 YTHDC2Q9H6S0 1430 aaKnown RBP14.77□□□□□ -0.04
HMGN2P40-201ENST00000566875 NPHP3Q7Z494 1330 aa14.77□□□□□ -0.04
HMGN2P40-201ENST00000566875 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.05
HMGN2P40-201ENST00000566875 RXRBP28702 533 aa14.76□□□□□ -0.05
HMGN2P40-201ENST00000566875 NGLY1Q96IV0 654 aa14.76□□□□□ -0.05
HMGN2P40-201ENST00000566875 PRAM1Q96QH2 718 aa14.76□□□□□ -0.05
HMGN2P40-201ENST00000566875 ADAMTS2O95450 1211 aa14.74□□□□□ -0.05
HMGN2P40-201ENST00000566875 C8orf37Q96NL8 207 aa14.74□□□□□ -0.05
HMGN2P40-201ENST00000566875 TRAK1Q9UPV9 953 aa14.74□□□□□ -0.05
HMGN2P40-201ENST00000566875 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
HMGN2P40-201ENST00000566875 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
HMGN2P40-201ENST00000566875 QTRT2Q9H974 415 aaKnown RBP14.73□□□□□ -0.05
HMGN2P40-201ENST00000566875 PNPLA6Q8IY17 1366 aa14.73□□□□□ -0.05
HMGN2P40-201ENST00000566875 SETD1AO15047 1707 aaKnown RBP14.72□□□□□ -0.05
HMGN2P40-201ENST00000566875 AFF2P51816 1311 aa14.72□□□□□ -0.05
HMGN2P40-201ENST00000566875 NRXN1Q9ULB1 1477 aa14.72□□□□□ -0.05
HMGN2P40-201ENST00000566875 PSME1Q06323 249 aa14.72□□□□□ -0.05
HMGN2P40-201ENST00000566875 KRT28Q7Z3Y7 464 aa14.72□□□□□ -0.05
HMGN2P40-201ENST00000566875 MYOM2P54296 1465 aa14.71□□□□□ -0.05
HMGN2P40-201ENST00000566875 PHF8Q9UPP1 1060 aa14.71□□□□□ -0.05
HMGN2P40-201ENST00000566875 LRP6O75581 1613 aa14.7□□□□□ -0.06
HMGN2P40-201ENST00000566875 XPCQ01831 940 aaPredicted RBP14.7□□□□□ -0.06
HMGN2P40-201ENST00000566875 NALCNQ8IZF0 1738 aa14.69□□□□□ -0.06
HMGN2P40-201ENST00000566875 RBM6P78332 1123 aaKnown RBP14.69□□□□□ -0.06
HMGN2P40-201ENST00000566875 FNBP4Q8N3X1 1017 aaPredicted RBP14.68□□□□□ -0.06
HMGN2P40-201ENST00000566875 SHPRHQ149N8 1683 aa14.68□□□□□ -0.06
HMGN2P40-201ENST00000566875 USP21Q9UK80 565 aa14.67□□□□□ -0.06
HMGN2P40-201ENST00000566875 NHSL1Q5SYE7 1610 aa14.66□□□□□ -0.06
HMGN2P40-201ENST00000566875 IFT172Q9UG01 1749 aa14.66□□□□□ -0.06
HMGN2P40-201ENST00000566875 WASLO00401 505 aaPredicted RBP14.66□□□□□ -0.06
HMGN2P40-201ENST00000566875 HIRIP3Q9BW71 556 aaPredicted RBP14.66□□□□□ -0.06
HMGN2P40-201ENST00000566875 SPATA31A3Q5VYP0 1347 aa14.66□□□□□ -0.06
HMGN2P40-201ENST00000566875 CDC42BPGQ6DT37 1551 aa14.65□□□□□ -0.06
HMGN2P40-201ENST00000566875 TRPC5Q9UL62 973 aaPredicted RBP14.65□□□□□ -0.06
HMGN2P40-201ENST00000566875 MINK1Q8N4C8 1332 aaPredicted RBP14.65□□□□□ -0.06
HMGN2P40-201ENST00000566875 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
HMGN2P40-201ENST00000566875 LMOD2Q6P5Q4 547 aa14.63□□□□□ -0.07
HMGN2P40-201ENST00000566875 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
HMGN2P40-201ENST00000566875 LAMC1P11047 1609 aa14.62□□□□□ -0.07
HMGN2P40-201ENST00000566875 DLC1Q96QB1 1528 aa14.61□□□□□ -0.07
HMGN2P40-201ENST00000566875 EIF3AQ14152 1382 aaKnown RBP14.61□□□□□ -0.07
HMGN2P40-201ENST00000566875 NBPF1Q3BBV0 1214 aa14.61□□□□□ -0.07
HMGN2P40-201ENST00000566875 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
HMGN2P40-201ENST00000566875 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 UPF1Q92900 1129 aaKnown RBP eCLIP14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 L3MBTL2Q969R5 705 aa14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 NUDT16Q96DE0 195 aaKnown RBP14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 CDK19Q9BWU1 502 aa14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 PXDNQ92626 1479 aa14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
HMGN2P40-201ENST00000566875 ANKARQ7Z5J8 1434 aa14.59□□□□□ -0.07
HMGN2P40-201ENST00000566875 KNDC1Q76NI1 1749 aa14.59□□□□□ -0.07
HMGN2P40-201ENST00000566875 SIN3AQ96ST3 1273 aa14.59□□□□□ -0.07
HMGN2P40-201ENST00000566875 ADGRB1O14514 1584 aa14.59□□□□□ -0.07
HMGN2P40-201ENST00000566875 UNC5CLQ8IV45 518 aa14.58□□□□□ -0.08
HMGN2P40-201ENST00000566875 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
HMGN2P40-201ENST00000566875 CDK12Q9NYV4 1490 aaPredicted RBP14.57□□□□□ -0.08
HMGN2P40-201ENST00000566875 CABLES1Q8TDN4 633 aa14.57□□□□□ -0.08
HMGN2P40-201ENST00000566875 GJD4Q96KN9 370 aaPredicted RBP14.57□□□□□ -0.08
HMGN2P40-201ENST00000566875 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
HMGN2P40-201ENST00000566875 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
HMGN2P40-201ENST00000566875 PRR36Q9H6K5 1346 aa14.56□□□□□ -0.08
HMGN2P40-201ENST00000566875 ARHGEF10O15013 1369 aa14.56□□□□□ -0.08
HMGN2P40-201ENST00000566875 FMN2Q9NZ56 1722 aa14.54□□□□□ -0.08
HMGN2P40-201ENST00000566875 TNS3Q68CZ2 1445 aa14.53□□□□□ -0.08
HMGN2P40-201ENST00000566875 PLEKHG3A1L390 1219 aa14.53□□□□□ -0.08
HMGN2P40-201ENST00000566875 FAM83GA6ND36 823 aa14.53□□□□□ -0.08
HMGN2P40-201ENST00000566875 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
HMGN2P40-201ENST00000566875 NBPF8Q3BBV2 869 aa14.53□□□□□ -0.08
HMGN2P40-201ENST00000566875 BCL9LQ86UU0 1499 aa14.52□□□□□ -0.08
HMGN2P40-201ENST00000566875 CENPJQ9HC77 1338 aaPredicted RBP14.52□□□□□ -0.08
HMGN2P40-201ENST00000566875 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.09
HMGN2P40-201ENST00000566875 ATRNO75882 1429 aa14.51□□□□□ -0.09
HMGN2P40-201ENST00000566875 KIF1AQ12756 1690 aa14.51□□□□□ -0.09
HMGN2P40-201ENST00000566875 COL22A1Q8NFW1 1626 aaPredicted RBP14.51□□□□□ -0.09
HMGN2P40-201ENST00000566875 VPS72Q15906 364 aa14.5□□□□□ -0.09
HMGN2P40-201ENST00000566875 ACEP12821 1306 aa14.49□□□□□ -0.09
HMGN2P40-201ENST00000566875 CCDC125Q86Z20 511 aa14.49□□□□□ -0.09
HMGN2P40-201ENST00000566875 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
HMGN2P40-201ENST00000566875 ONECUT3O60422 494 aaPredicted RBP14.48□□□□□ -0.09
HMGN2P40-201ENST00000566875 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
HMGN2P40-201ENST00000566875 ADGRB2O60241 1585 aa14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 RGPD8O14715 1765 aaPredicted RBP14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 ADRA2BP18089 450 aa14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 ABTB2Q8N961 1025 aa14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 BTG4Q9NY30 223 aa14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 RGS12O14924 1447 aa14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 ATAD2Q6PL18 1390 aa14.47□□□□□ -0.09
HMGN2P40-201ENST00000566875 SLIT2O94813 1529 aa14.46□□□□□ -0.09
HMGN2P40-201ENST00000566875 CABP1Q9NZU7 370 aa14.46□□□□□ -0.09
HMGN2P40-201ENST00000566875 EVC2Q86UK5 1308 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms