RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 DCCP43146 1447 aa14.85□□□□□ -0.03
GTF3C1-206ENST00000566779 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
GTF3C1-206ENST00000566779 MST1RQ04912 1400 aa14.84□□□□□ -0.03
GTF3C1-206ENST00000566779 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
GTF3C1-206ENST00000566779 PIK3C2GO75747 1445 aa14.83□□□□□ -0.03
GTF3C1-206ENST00000566779 TMEM132EQ6IEE7 984 aa14.83□□□□□ -0.04
GTF3C1-206ENST00000566779 MYOM2P54296 1465 aa14.82□□□□□ -0.04
GTF3C1-206ENST00000566779 BRINP3Q76B58 766 aa14.82□□□□□ -0.04
GTF3C1-206ENST00000566779 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
GTF3C1-206ENST00000566779 JCADQ9P266 1359 aa14.81□□□□□ -0.04
GTF3C1-206ENST00000566779 DDX17Q92841 729 aaKnown RBP14.8□□□□□ -0.04
GTF3C1-206ENST00000566779 CDC42BPGQ6DT37 1551 aa14.8□□□□□ -0.04
GTF3C1-206ENST00000566779 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-206ENST00000566779 MEX3CQ5U5Q3 659 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-206ENST00000566779 C1orf167Q5SNV9 1468 aa14.78□□□□□ -0.04
GTF3C1-206ENST00000566779 YTHDC2Q9H6S0 1430 aaKnown RBP14.78□□□□□ -0.04
GTF3C1-206ENST00000566779 LRPPRCP42704 1394 aaKnown RBP14.78□□□□□ -0.04
GTF3C1-206ENST00000566779 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
GTF3C1-206ENST00000566779 WAPLQ7Z5K2 1190 aa14.78□□□□□ -0.04
GTF3C1-206ENST00000566779 FMN2Q9NZ56 1722 aa14.78□□□□□ -0.04
GTF3C1-206ENST00000566779 PLEKHH1Q9ULM0 1364 aa14.77□□□□□ -0.04
GTF3C1-206ENST00000566779 NUTM2BA6NNL0 878 aaPredicted RBP14.77□□□□□ -0.05
GTF3C1-206ENST00000566779 NUTM2EB1AL46 878 aaPredicted RBP14.77□□□□□ -0.05
GTF3C1-206ENST00000566779 SAFB2Q14151 953 aaKnown RBP eCLIP14.77□□□□□ -0.05
GTF3C1-206ENST00000566779 CFAP70Q5T0N1 1121 aa14.77□□□□□ -0.05
GTF3C1-206ENST00000566779 NUTM2AQ8IVF1 878 aaPredicted RBP14.77□□□□□ -0.05
GTF3C1-206ENST00000566779 LRP6O75581 1613 aa14.77□□□□□ -0.05
GTF3C1-206ENST00000566779 NRXN1Q9ULB1 1477 aa14.76□□□□□ -0.05
GTF3C1-206ENST00000566779 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
GTF3C1-206ENST00000566779 SOCS7O14512 581 aa14.76□□□□□ -0.05
GTF3C1-206ENST00000566779 DCAF11Q8TEB1 546 aa14.76□□□□□ -0.05
GTF3C1-206ENST00000566779 TECPR2O15040 1411 aa14.75□□□□□ -0.05
GTF3C1-206ENST00000566779 ORAI2Q96SN7 254 aa14.74□□□□□ -0.05
GTF3C1-206ENST00000566779 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-206ENST00000566779 ARHGEF28Q8N1W1 1705 aaKnown RBP14.72□□□□□ -0.05
GTF3C1-206ENST00000566779 ESCO1Q5FWF5 840 aa14.72□□□□□ -0.05
GTF3C1-206ENST00000566779 C14orf93Q9H972 538 aaKnown RBP14.72□□□□□ -0.05
GTF3C1-206ENST00000566779 ABCC11Q96J66 1382 aa14.72□□□□□ -0.05
GTF3C1-206ENST00000566779 KIF1AQ12756 1690 aa14.71□□□□□ -0.05
GTF3C1-206ENST00000566779 SPATA31A6Q5VVP1 1343 aa14.71□□□□□ -0.05
GTF3C1-206ENST00000566779 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
GTF3C1-206ENST00000566779 HRCP23327 699 aa14.71□□□□□ -0.05
GTF3C1-206ENST00000566779 XPCQ01831 940 aaPredicted RBP14.71□□□□□ -0.05
GTF3C1-206ENST00000566779 ADGRB1O14514 1584 aa14.7□□□□□ -0.06
GTF3C1-206ENST00000566779 PRAM1Q96QH2 718 aa14.7□□□□□ -0.06
GTF3C1-206ENST00000566779 POGKQ9P215 609 aa14.7□□□□□ -0.06
GTF3C1-206ENST00000566779 RGS17Q9UGC6 210 aaPredicted RBP14.7□□□□□ -0.06
GTF3C1-206ENST00000566779 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
GTF3C1-206ENST00000566779 LRRC59Q96AG4 307 aaKnown RBP14.68□□□□□ -0.06
GTF3C1-206ENST00000566779 PNPLA6Q8IY17 1366 aa14.68□□□□□ -0.06
GTF3C1-206ENST00000566779 DLC1Q96QB1 1528 aa14.67□□□□□ -0.06
GTF3C1-206ENST00000566779 PLEKHG5O94827 1062 aa14.67□□□□□ -0.06
GTF3C1-206ENST00000566779 POTEAQ6S8J7 498 aa14.67□□□□□ -0.06
GTF3C1-206ENST00000566779 HIRIP3Q9BW71 556 aaPredicted RBP14.67□□□□□ -0.06
GTF3C1-206ENST00000566779 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
GTF3C1-206ENST00000566779 MARF1Q9Y4F3 1742 aaKnown RBP14.66□□□□□ -0.06
GTF3C1-206ENST00000566779 KIAA1210Q9ULL0 1709 aa14.66□□□□□ -0.06
GTF3C1-206ENST00000566779 USP32Q8NFA0 1604 aa14.66□□□□□ -0.06
GTF3C1-206ENST00000566779 ADGRB2O60241 1585 aa14.65□□□□□ -0.06
GTF3C1-206ENST00000566779 FOXO3O43524 673 aa14.65□□□□□ -0.06
GTF3C1-206ENST00000566779 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
GTF3C1-206ENST00000566779 C8orf37Q96NL8 207 aa14.65□□□□□ -0.06
GTF3C1-206ENST00000566779 NPHP3Q7Z494 1330 aa14.65□□□□□ -0.06
GTF3C1-206ENST00000566779 PXDNQ92626 1479 aa14.64□□□□□ -0.07
GTF3C1-206ENST00000566779 ITSN1Q15811 1721 aa14.64□□□□□ -0.07
GTF3C1-206ENST00000566779 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
GTF3C1-206ENST00000566779 COL22A1Q8NFW1 1626 aaPredicted RBP14.63□□□□□ -0.07
GTF3C1-206ENST00000566779 AFF2P51816 1311 aa14.63□□□□□ -0.07
GTF3C1-206ENST00000566779 SOS2Q07890 1332 aaPredicted RBP14.62□□□□□ -0.07
GTF3C1-206ENST00000566779 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
GTF3C1-206ENST00000566779 SIN3AQ96ST3 1273 aa14.61□□□□□ -0.07
GTF3C1-206ENST00000566779 ZNF772Q68DY9 489 aaPredicted RBP14.6□□□□□ -0.07
GTF3C1-206ENST00000566779 LMOD2Q6P5Q4 547 aa14.6□□□□□ -0.07
GTF3C1-206ENST00000566779 ABCA3Q99758 1704 aa14.6□□□□□ -0.07
GTF3C1-206ENST00000566779 PMFBP1Q8TBY8 1022 aa14.59□□□□□ -0.07
GTF3C1-206ENST00000566779 SIRT1Q96EB6 747 aa14.59□□□□□ -0.07
GTF3C1-206ENST00000566779 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
GTF3C1-206ENST00000566779 TULP4Q9NRJ4 1543 aa14.59□□□□□ -0.07
GTF3C1-206ENST00000566779 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
GTF3C1-206ENST00000566779 NGLY1Q96IV0 654 aa14.58□□□□□ -0.08
GTF3C1-206ENST00000566779 TRPM1Q7Z4N2 1603 aa14.58□□□□□ -0.08
GTF3C1-206ENST00000566779 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-206ENST00000566779 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
GTF3C1-206ENST00000566779 ANKARQ7Z5J8 1434 aa14.57□□□□□ -0.08
GTF3C1-206ENST00000566779 TRPM3Q9HCF6 1732 aaPredicted RBP14.56□□□□□ -0.08
GTF3C1-206ENST00000566779 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
GTF3C1-206ENST00000566779 EIF3AQ14152 1382 aaKnown RBP14.56□□□□□ -0.08
GTF3C1-206ENST00000566779 TNS3Q68CZ2 1445 aa14.56□□□□□ -0.08
GTF3C1-206ENST00000566779 SPDYE4A6NLX3 237 aa14.55□□□□□ -0.08
GTF3C1-206ENST00000566779 PSME1Q06323 249 aa14.55□□□□□ -0.08
GTF3C1-206ENST00000566779 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
GTF3C1-206ENST00000566779 L3MBTL2Q969R5 705 aa14.55□□□□□ -0.08
GTF3C1-206ENST00000566779 PLCH1Q4KWH8 1693 aa14.55□□□□□ -0.08
GTF3C1-206ENST00000566779 TOPAZ1Q8N9V7 1692 aa14.55□□□□□ -0.08
GTF3C1-206ENST00000566779 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
GTF3C1-206ENST00000566779 PRR36Q9H6K5 1346 aa14.53□□□□□ -0.08
GTF3C1-206ENST00000566779 WASLO00401 505 aaPredicted RBP14.53□□□□□ -0.08
GTF3C1-206ENST00000566779 RXRBP28702 533 aa14.53□□□□□ -0.08
GTF3C1-206ENST00000566779 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
GTF3C1-206ENST00000566779 ALS2Q96Q42 1657 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms