RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 NALCNQ8IZF0 1738 aa23.4■■□□□ 1.34
SCAMP2-208ENST00000566557 PHLPP1O60346 1717 aa23.39■■□□□ 1.34
SCAMP2-208ENST00000566557 RXRBP28702 533 aa23.39■■□□□ 1.33
SCAMP2-208ENST00000566557 TECPR2O15040 1411 aa23.39■■□□□ 1.33
SCAMP2-208ENST00000566557 ABCC11Q96J66 1382 aa23.38■■□□□ 1.33
SCAMP2-208ENST00000566557 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.36■■□□□ 1.33
SCAMP2-208ENST00000566557 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
SCAMP2-208ENST00000566557 TRAK1Q9UPV9 953 aa23.36■■□□□ 1.33
SCAMP2-208ENST00000566557 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
SCAMP2-208ENST00000566557 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
SCAMP2-208ENST00000566557 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
SCAMP2-208ENST00000566557 ROCK2O75116 1388 aaKnown RBP23.35■■□□□ 1.33
SCAMP2-208ENST00000566557 ADGRL3Q9HAR2 1447 aa23.34■■□□□ 1.33
SCAMP2-208ENST00000566557 DLC1Q96QB1 1528 aa23.34■■□□□ 1.33
SCAMP2-208ENST00000566557 LRP6O75581 1613 aa23.34■■□□□ 1.33
SCAMP2-208ENST00000566557 PLEKHH1Q9ULM0 1364 aa23.33■■□□□ 1.33
SCAMP2-208ENST00000566557 NUTM2BA6NNL0 878 aaPredicted RBP23.32■■□□□ 1.32
SCAMP2-208ENST00000566557 NUTM2EB1AL46 878 aaPredicted RBP23.32■■□□□ 1.32
SCAMP2-208ENST00000566557 WAPLQ7Z5K2 1190 aa23.32■■□□□ 1.32
SCAMP2-208ENST00000566557 NUTM2AQ8IVF1 878 aaPredicted RBP23.32■■□□□ 1.32
SCAMP2-208ENST00000566557 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
SCAMP2-208ENST00000566557 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
SCAMP2-208ENST00000566557 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
SCAMP2-208ENST00000566557 POGKQ9P215 609 aa23.31■■□□□ 1.32
SCAMP2-208ENST00000566557 ATF3P18847 181 aa23.3■■□□□ 1.32
SCAMP2-208ENST00000566557 CADPS2Q86UW7 1296 aa23.3■■□□□ 1.32
SCAMP2-208ENST00000566557 TIMELESSQ9UNS1 1208 aa23.3■■□□□ 1.32
SCAMP2-208ENST00000566557 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
SCAMP2-208ENST00000566557 C19orf44Q9H6X5 657 aa23.29■■□□□ 1.32
SCAMP2-208ENST00000566557 DCCP43146 1447 aa23.28■■□□□ 1.32
SCAMP2-208ENST00000566557 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
SCAMP2-208ENST00000566557 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
SCAMP2-208ENST00000566557 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
SCAMP2-208ENST00000566557 QRICH2Q9H0J4 1663 aa23.23■■□□□ 1.31
SCAMP2-208ENST00000566557 AFF2P51816 1311 aa23.23■■□□□ 1.31
SCAMP2-208ENST00000566557 MINK1Q8N4C8 1332 aaPredicted RBP23.22■■□□□ 1.31
SCAMP2-208ENST00000566557 GPRASP1Q5JY77 1395 aa23.22■■□□□ 1.31
SCAMP2-208ENST00000566557 BRINP3Q76B58 766 aa23.21■■□□□ 1.31
SCAMP2-208ENST00000566557 EIF3AQ14152 1382 aaKnown RBP23.21■■□□□ 1.31
SCAMP2-208ENST00000566557 ADGRB2O60241 1585 aa23.21■■□□□ 1.31
SCAMP2-208ENST00000566557 FMN2Q9NZ56 1722 aa23.2■■□□□ 1.3
SCAMP2-208ENST00000566557 HIRIP3Q9BW71 556 aaPredicted RBP23.2■■□□□ 1.3
SCAMP2-208ENST00000566557 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
SCAMP2-208ENST00000566557 MST1RQ04912 1400 aa23.19■■□□□ 1.3
SCAMP2-208ENST00000566557 QTRT2Q9H974 415 aaKnown RBP23.19■■□□□ 1.3
SCAMP2-208ENST00000566557 CENPJQ9HC77 1338 aaPredicted RBP23.18■■□□□ 1.3
SCAMP2-208ENST00000566557 AHDC1Q5TGY3 1603 aaPredicted RBP23.16■■□□□ 1.3
SCAMP2-208ENST00000566557 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
SCAMP2-208ENST00000566557 RBM6P78332 1123 aaKnown RBP23.15■■□□□ 1.3
SCAMP2-208ENST00000566557 C8orf37Q96NL8 207 aa23.15■■□□□ 1.3
SCAMP2-208ENST00000566557 SHPRHQ149N8 1683 aa23.14■■□□□ 1.29
SCAMP2-208ENST00000566557 C1orf167Q5SNV9 1468 aa23.14■■□□□ 1.29
SCAMP2-208ENST00000566557 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
SCAMP2-208ENST00000566557 RGPD8O14715 1765 aaPredicted RBP23.1■■□□□ 1.29
SCAMP2-208ENST00000566557 TULP4Q9NRJ4 1543 aa23.09■■□□□ 1.29
SCAMP2-208ENST00000566557 RGS12O14924 1447 aa23.08■■□□□ 1.29
SCAMP2-208ENST00000566557 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
SCAMP2-208ENST00000566557 USP47Q96K76 1375 aa23.08■■□□□ 1.29
SCAMP2-208ENST00000566557 USP32Q8NFA0 1604 aa23.08■■□□□ 1.28
SCAMP2-208ENST00000566557 NGLY1Q96IV0 654 aa23.07■■□□□ 1.28
SCAMP2-208ENST00000566557 ESCO1Q5FWF5 840 aa23.06■■□□□ 1.28
SCAMP2-208ENST00000566557 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
SCAMP2-208ENST00000566557 ORAI2Q96SN7 254 aa23.06■■□□□ 1.28
SCAMP2-208ENST00000566557 ANKARQ7Z5J8 1434 aa23.06■■□□□ 1.28
SCAMP2-208ENST00000566557 KIF1AQ12756 1690 aa23.06■■□□□ 1.28
SCAMP2-208ENST00000566557 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
SCAMP2-208ENST00000566557 NHSL1Q5SYE7 1610 aa23.05■■□□□ 1.28
SCAMP2-208ENST00000566557 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
SCAMP2-208ENST00000566557 ZRANB1Q9UGI0 708 aa23.04■■□□□ 1.28
SCAMP2-208ENST00000566557 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
SCAMP2-208ENST00000566557 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
SCAMP2-208ENST00000566557 ATP7BP35670 1465 aa23.02■■□□□ 1.28
SCAMP2-208ENST00000566557 EVC2Q86UK5 1308 aa23.02■■□□□ 1.28
SCAMP2-208ENST00000566557 ST20-MTHFSA0A0A6YYL1 179 aa23.01■■□□□ 1.27
SCAMP2-208ENST00000566557 PRR36Q9H6K5 1346 aa23■■□□□ 1.27
SCAMP2-208ENST00000566557 ATAD2Q6PL18 1390 aa23■■□□□ 1.27
SCAMP2-208ENST00000566557 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
SCAMP2-208ENST00000566557 TOPAZ1Q8N9V7 1692 aa23■■□□□ 1.27
SCAMP2-208ENST00000566557 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
SCAMP2-208ENST00000566557 PNPLA6Q8IY17 1366 aa22.99■■□□□ 1.27
SCAMP2-208ENST00000566557 NUDT16Q96DE0 195 aaKnown RBP22.97■■□□□ 1.27
SCAMP2-208ENST00000566557 USP21Q9UK80 565 aa22.97■■□□□ 1.27
SCAMP2-208ENST00000566557 PHF8Q9UPP1 1060 aa22.97■■□□□ 1.27
SCAMP2-208ENST00000566557 PMFBP1Q8TBY8 1022 aa22.96■■□□□ 1.27
SCAMP2-208ENST00000566557 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.26
SCAMP2-208ENST00000566557 TRPC5Q9UL62 973 aaPredicted RBP22.95■■□□□ 1.26
SCAMP2-208ENST00000566557 FOXO3O43524 673 aa22.94■■□□□ 1.26
SCAMP2-208ENST00000566557 EIF4G2P78344 907 aaKnown RBP eCLIP22.94■■□□□ 1.26
SCAMP2-208ENST00000566557 XPCQ01831 940 aaPredicted RBP22.93■■□□□ 1.26
SCAMP2-208ENST00000566557 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
SCAMP2-208ENST00000566557 HSPA5P11021 654 aaKnown RBP22.91■■□□□ 1.26
SCAMP2-208ENST00000566557 TESK2Q96S53 571 aa22.91■■□□□ 1.26
SCAMP2-208ENST00000566557 EP400Q96L91 3159 aa22.91■■□□□ 1.26
SCAMP2-208ENST00000566557 NGDNQ8NEJ9 315 aaKnown RBP22.9■■□□□ 1.26
SCAMP2-208ENST00000566557 CCDC61Q9Y6R9 512 aa22.9■■□□□ 1.26
SCAMP2-208ENST00000566557 PXDNQ92626 1479 aa22.9■■□□□ 1.26
SCAMP2-208ENST00000566557 TMF1P82094 1093 aa22.89■■□□□ 1.25
SCAMP2-208ENST00000566557 CCDC125Q86Z20 511 aa22.88■■□□□ 1.25
SCAMP2-208ENST00000566557 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
SCAMP2-208ENST00000566557 SLC24A1O60721 1099 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms