RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 APBB1O00213 710 aa5.67□□□□□ -1.5
HERPUD1-211ENST00000566550 ZBTB24O43167 697 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-211ENST00000566550 PDIA4P13667 645 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-211ENST00000566550 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-211ENST00000566550 SCUBE3Q8IX30 993 aa5.67□□□□□ -1.5
HERPUD1-211ENST00000566550 KRI1Q8N9T8 703 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-211ENST00000566550 SENP2Q9HC62 589 aa5.67□□□□□ -1.5
HERPUD1-211ENST00000566550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-211ENST00000566550 RCCD1A6NED2 376 aa5.66□□□□□ -1.5
HERPUD1-211ENST00000566550 KDM4CQ9H3R0 1056 aa5.66□□□□□ -1.5
HERPUD1-211ENST00000566550 TOR4AQ9NXH8 423 aa5.66□□□□□ -1.5
HERPUD1-211ENST00000566550 NFX1Q12986 1120 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-211ENST00000566550 PLA2G2CQ5R387 149 aa5.65□□□□□ -1.5
HERPUD1-211ENST00000566550 SMYD5Q6GMV2 418 aa5.65□□□□□ -1.5
HERPUD1-211ENST00000566550 BARGINQ6ZT62 677 aa5.65□□□□□ -1.5
HERPUD1-211ENST00000566550 AK7Q96M32 723 aa5.65□□□□□ -1.5
HERPUD1-211ENST00000566550 DACH1Q9UI36 760 aa5.65□□□□□ -1.5
HERPUD1-211ENST00000566550 SLC16A10Q8TF71 515 aa5.64□□□□□ -1.51
HERPUD1-211ENST00000566550 ADGRG1Q9Y653 693 aa5.64□□□□□ -1.51
HERPUD1-211ENST00000566550 TERTO14746 1132 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-211ENST00000566550 PTGDRQ13258 359 aa5.63□□□□□ -1.51
HERPUD1-211ENST00000566550 KIFC2Q96AC6 838 aa5.63□□□□□ -1.51
HERPUD1-211ENST00000566550 OATP04181 439 aa5.62□□□□□ -1.51
HERPUD1-211ENST00000566550 GPIHBP1Q8IV16 184 aa5.62□□□□□ -1.51
HERPUD1-211ENST00000566550 FCF1Q9Y324 198 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-211ENST00000566550 NUTM2FA1L443 756 aa5.61□□□□□ -1.51
HERPUD1-211ENST00000566550 FMNL1O95466 1100 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-211ENST00000566550 SLC10A3P09131 477 aa5.61□□□□□ -1.51
HERPUD1-211ENST00000566550 PUS10Q3MIT2 529 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-211ENST00000566550 RBM26Q5T8P6 1007 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-211ENST00000566550 SNIP1Q8TAD8 396 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-211ENST00000566550 ATP13A2Q9NQ11 1180 aa5.6□□□□□ -1.51
HERPUD1-211ENST00000566550 FCHSD2O94868 740 aa5.59□□□□□ -1.51
HERPUD1-211ENST00000566550 PDE4DQ08499 809 aa5.59□□□□□ -1.51
HERPUD1-211ENST00000566550 CCDC82Q8N4S0 544 aa5.59□□□□□ -1.51
HERPUD1-211ENST00000566550 TRIM47Q96LD4 638 aa5.59□□□□□ -1.51
HERPUD1-211ENST00000566550 WNT7AO00755 349 aa5.58□□□□□ -1.52
HERPUD1-211ENST00000566550 RDH13Q8NBN7 331 aa5.58□□□□□ -1.52
HERPUD1-211ENST00000566550 TRIM66O15016 1216 aa5.57□□□□□ -1.52
HERPUD1-211ENST00000566550 SNRPBP14678 240 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-211ENST00000566550 ATP6V1AP38606 617 aa5.57□□□□□ -1.52
HERPUD1-211ENST00000566550 GRIPAP1Q4V328 841 aa5.57□□□□□ -1.52
HERPUD1-211ENST00000566550 REPIN1Q9BWE0 567 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-211ENST00000566550 FAM117AQ9C073 453 aa5.57□□□□□ -1.52
HERPUD1-211ENST00000566550 SMPD1P17405 629 aa5.56□□□□□ -1.52
HERPUD1-211ENST00000566550 FAM161AQ3B820 660 aa5.56□□□□□ -1.52
HERPUD1-211ENST00000566550 MORN1Q5T089 497 aa5.56□□□□□ -1.52
HERPUD1-211ENST00000566550 KCTD17Q8N5Z5 321 aa5.56□□□□□ -1.52
HERPUD1-211ENST00000566550 PXYLP1Q8TE99 480 aa5.56□□□□□ -1.52
HERPUD1-211ENST00000566550 SALL2Q9Y467 1007 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-211ENST00000566550 MLLT3P42568 568 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-211ENST00000566550 ZSCAN1Q8NBB4 408 aa5.55□□□□□ -1.52
HERPUD1-211ENST00000566550 IRF7Q92985 503 aa5.55□□□□□ -1.52
HERPUD1-211ENST00000566550 FLIIQ13045 1269 aa5.54□□□□□ -1.52
HERPUD1-211ENST00000566550 SULF1Q8IWU6 871 aa5.54□□□□□ -1.52
HERPUD1-211ENST00000566550 FAM160A2Q8N612 972 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-211ENST00000566550 CLUAP1Q96AJ1 413 aa5.54□□□□□ -1.52
HERPUD1-211ENST00000566550 THAP11Q96EK4 314 aa5.54□□□□□ -1.52
HERPUD1-211ENST00000566550 NXF1Q9UBU9 619 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-211ENST00000566550 FECHP22830 423 aa5.53□□□□□ -1.52
HERPUD1-211ENST00000566550 FUT2Q10981 343 aa5.53□□□□□ -1.52
HERPUD1-211ENST00000566550 Q3C1V9 767 aa5.53□□□□□ -1.52
HERPUD1-211ENST00000566550 MSS51Q4VC12 460 aa5.53□□□□□ -1.52
HERPUD1-211ENST00000566550 AEBP1Q8IUX7 1158 aa5.53□□□□□ -1.52
HERPUD1-211ENST00000566550 NPAS3Q8IXF0 933 aa5.53□□□□□ -1.52
HERPUD1-211ENST00000566550 DDX11L8A8MPP1 907 aa5.52□□□□□ -1.53
HERPUD1-211ENST00000566550 J3QL48 77 aa5.52□□□□□ -1.53
HERPUD1-211ENST00000566550 RAD21O60216 631 aa5.52□□□□□ -1.53
HERPUD1-211ENST00000566550 TRIM32Q13049 653 aa5.52□□□□□ -1.53
HERPUD1-211ENST00000566550 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
HERPUD1-211ENST00000566550 MRGPRX2Q96LB1 330 aa5.52□□□□□ -1.53
HERPUD1-211ENST00000566550 SLC27A5Q9Y2P5 690 aa5.52□□□□□ -1.53
HERPUD1-211ENST00000566550 HIC1Q14526 733 aa5.51□□□□□ -1.53
HERPUD1-211ENST00000566550 METTL3Q86U44 580 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-211ENST00000566550 PLEKHG3A1L390 1219 aa5.5□□□□□ -1.53
HERPUD1-211ENST00000566550 TRAK2O60296 914 aa5.5□□□□□ -1.53
HERPUD1-211ENST00000566550 HPS1Q92902 700 aa5.5□□□□□ -1.53
HERPUD1-211ENST00000566550 DDRGK1Q96HY6 314 aa5.5□□□□□ -1.53
HERPUD1-211ENST00000566550 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
HERPUD1-211ENST00000566550 GMPRP36959 345 aa5.49□□□□□ -1.53
HERPUD1-211ENST00000566550 GCGRP47871 477 aa5.49□□□□□ -1.53
HERPUD1-211ENST00000566550 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
HERPUD1-211ENST00000566550 PRDM9Q9NQV7 894 aa5.49□□□□□ -1.53
HERPUD1-211ENST00000566550 WNT7BP56706 349 aa5.48□□□□□ -1.53
HERPUD1-211ENST00000566550 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
HERPUD1-211ENST00000566550 RC3H1Q5TC82 1133 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-211ENST00000566550 CCDC97Q96F63 343 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-211ENST00000566550 ZNF777Q9ULD5 760 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-211ENST00000566550 ALDH1A1P00352 501 aa5.47□□□□□ -1.53
HERPUD1-211ENST00000566550 CCDC24Q8N4L8 307 aa5.47□□□□□ -1.53
HERPUD1-211ENST00000566550 CCDC102AQ96A19 550 aa5.47□□□□□ -1.53
HERPUD1-211ENST00000566550 A6NJR5 290 aa5.46□□□□□ -1.54
HERPUD1-211ENST00000566550 MMP16P51512 607 aa5.46□□□□□ -1.54
HERPUD1-211ENST00000566550 TTLL12Q14166 644 aaPredicted RBP5.46□□□□□ -1.54
HERPUD1-211ENST00000566550 TMCO4Q5TGY1 634 aa5.46□□□□□ -1.54
HERPUD1-211ENST00000566550 PARP9Q8IXQ6 854 aa5.46□□□□□ -1.54
HERPUD1-211ENST00000566550 WASF2Q9Y6W5 498 aa5.46□□□□□ -1.54
HERPUD1-211ENST00000566550 CAPN5O15484 640 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 RBM25P49756 843 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 SUZ12Q15022 739 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms